mRNA_F-distichus_contig10097.76.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10097.76.1
Unique NamemRNA_F-distichus_contig10097.76.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
[Close]
BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Match: A0A6H5KX44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX44_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 1.130e-101
Identity = 153/250 (61.20%), Postives = 189/250 (75.60%), Query Frame = 1 
Query:   73 PAPSTPNILWWTESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLSDLAYSRRETNR--WVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIEIIWVTILSRQAAEQARANDEPD 816
            P P TP+ILWWT++R EE+   N   NAGF++ V LF I  +F +++E+SRGWT GE ILR+P+DNW  Y+ +LR +PV VKACTSGIVY LGD  AQ+ EGT L  I+R RV RSA+AGLLLHGPLSHVWY++ +  +     N   WV APK++ DQ+LWGP WNAVYI F+G L  DS     EA+ +TALPLVIAGIRLWPLAH+VTYG++P ENRLLWVD +EI+WVTILS QAAEQAR+  E +
Sbjct:   91 PKPYTPSILWWTKNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELAEIERQRVVRSAMAGLLLHGPLSHVWYNVCEGLFDIVGWNEYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHVVTYGLVPKENRLLWVDAVEIVWVTILSSQAAEQARSPAEQE 340
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BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Match: A0A836C8Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z2_9STRA)

HSP 1 Score: 280 bits (715), Expect = 4.240e-85
Identity = 131/244 (53.69%), Postives = 173/244 (70.90%), Query Frame = 1 
Query:   88 PNILWWTESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLSDLAYSRRETNR--WVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIEIIWVTILSRQAAEQARANDEP 813
            P +LWW +S  EED   N +VN+GF+ +V++   V + +   + SRGWTA EV+LR+P DNW  Y  +LR +PVLVKA TSG VY LGDWTAQT  GT L  + R RVARSA AG + HGPLSH WY++ +  +S    N   WV  PK++ DQ++WGP WNA Y+  VG +K D+     EAV +T +PLV++G++LWP  HLVTYG+IP ENRLLWVD +EI+WVTILS+QAA++A+  D+P
Sbjct:   43 PKLLWWCKSEMEEDREVNFLVNSGFLIAVIVTVAVRLASSTLDASRGWTAEEVLLRLPQDNWQGYMDMLRSHPVLVKAVTSGTVYALGDWTAQTTNGTPLAELDRWRVARSAAAGFVGHGPLSHCWYEVCEALFSAIGWNGAWWVTLPKIMTDQLVWGPIWNATYVVLVGLMKRDAPARVWEAVTSTMVPLVVSGLKLWPAVHLVTYGLIPPENRLLWVDTVEILWVTILSKQAADEAK-RDQP 285
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BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Match: B7G9T7_PHATC (Predicted protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9T7_PHATC)

HSP 1 Score: 227 bits (579), Expect = 2.090e-66
Identity = 108/217 (49.77%), Postives = 144/217 (66.36%), Query Frame = 1 
Query:  145 VVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLSDLAYSR--RETNRWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIEIIWVTILSRQAAE 789
            ++N GFI  VV   +  I T+D  ISRGWT+ E+  RIP+D W  Y+ VL ++PV  KA TS  VYT+GD+ AQ  +G A+  + R R+ RS +AGL+ HGPLSH WY++ D  +      T  W   PKVVVDQ  WGP WN  YI  +G +K +  ET    +  T +PL+++G++LWPLAH VTYG++P ENRLLWVD +EI+WVTIL+  AAE
Sbjct:    1 MINTGFIVGVVGVLLYEITTMDATISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTAWWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTAAE 217
[Close]
BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Match: W7TQH1_9STRA (Peroxisomal membrane 22 kDa (Mpv17 pmp22) family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH1_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.850e-66
Identity = 115/248 (46.37%), Postives = 156/248 (62.90%), Query Frame = 1 
Query:   61 LSDDPAPSTPNILW-----WTESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLSDLAYSRRETNRW-VAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIEIIWVTILSRQAA 786
            LS+  A  TP  L      +  ++  +    N ++N G IS+V    +  + T+D ++ RGWT  E+  RIP+DNW  Y +VL  +PV VKA TSG VYTLGD  AQ +EG  L  I R RVARS +AG + HGPLSH WY +S+  +       W    PK+ VDQ++W P WN  YI+ +G +K ++       V +T+  L+ +G++LWPLAH+VTYGVIP ENRLLWVD +EI+WVTILSR+AA
Sbjct:   93 LSEHDAADTPRSLQERVRLFAATKGVDSRQLNFLLNVGLISAVAALVLAKVVTVDLDVWRGWTPAEIFTRIPLDNWDGYMNVLSLHPVFVKAVTSGSVYTLGDGVAQLYEGKTLGEIDRGRVARSGIAGFVGHGPLSHWWYGVSEDFFGWLGWEGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVNTVKSTSFSLITSGLKLWPLAHVVTYGVIPVENRLLWVDLVEILWVTILSREAA 340
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BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Match: A0A7S1VV68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV68_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.630e-65
Identity = 106/217 (48.85%), Postives = 145/217 (66.82%), Query Frame = 1 
Query:  139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLSDLAYSRRETNRWVAA-PKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIEIIWVTILSRQAA 786
            N  +N G I  V L  +  + T+D ++ RGWTA E + RI +DNW  Y+ +L   P+  KA TS  VY +GD  AQ  EG ++  + R R  RS +AGL+ HGPLSHVWYD+S+  ++    N W    PKV+VDQ+ WGPFWN +YI  +G +K +S+ET    +  T +PL+++G++LWPLAH VTYG+IP ENRLLWVD +EI WVTIL+ QA+
Sbjct:  107 NETINTGLIVLVALGVLARVGTVDQDMMRGWTAAESLTRISLDNWADYSEILNAAPLQTKAITSATVYAIGDIIAQRTEGVSMGELDRPRTLRSLLAGLIGHGPLSHVWYDVSEELFTALHWNEWWGFFPKVMVDQLTWGPFWNNMYIVLLGIMKMESWETMWGDIKRTTVPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDVVEIAWVTILASQAS 323
[Close]
BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Match: A0A7S2HYH1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYH1_9STRA)

HSP 1 Score: 227 bits (579), Expect = 6.650e-65
Identity = 103/218 (47.25%), Postives = 146/218 (66.97%), Query Frame = 1 
Query:  139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLSDLAYSR--RETNRWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIEIIWVTILSRQAA 786
            N  +N   + +V++  +  + ++D  ++RGWT  EV  RIP+DNW +Y++VL D P+  KA TS  VYT+GD  AQ  EG ++  + R R+ RS +AGL+ HGPLSH WYD S+  +    + T  W   PKV++DQ  WGPFWN  YI  +G +K D +E     +  T +PLV++G++LWPLAH VTYG++P ENRLLWVD +EI+WVTIL+ QA+
Sbjct:   99 NSFINTAVVIAVLVALLSKVASVDAGLTRGWTPEEVAARIPMDNWSSYSAVLEDAPISTKAITSASVYTIGDVIAQRTEGNSMGDLDRPRILRSLLAGLIGHGPLSHFWYDYSEAFFDDVLKWTEWWSFFPKVILDQTTWGPFWNNTYIILLGAMKLDKWENIWGDIKRTTIPLVVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILATQAS 316
[Close]
BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Match: A0A7S2PLY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLY5_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.530e-64
Identity = 105/220 (47.73%), Postives = 145/220 (65.91%), Query Frame = 1 
Query:  136 FNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLSDLAYSRRE--TNRWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIEIIWVTILSRQAAE 789
            +N  +N G I+ V + A+  + T+D  + RGWTA E+ +RIPVDNW +Y S+L   P+  KA TS  VYT+GD  AQ  EG +   + R RV RS +AG + HGPLSHVWYD S+  ++ +   T  W   PKV +DQ+ WGPFWN  YI  +G ++    +     +  T +PL+++G++LWPLAH VTYG++P ENRLLWVD +EI+WVTIL+  AAE
Sbjct:   87 YNAYINIGVIAIVTVLALSKLATVDMGMMRGWTAAEMAVRIPVDNWASYESILHAAPISTKAVTSATVYTIGDIIAQRTEGKSYGDLDRWRVLRSLLAGCIGHGPLSHVWYDWSEDVFTEQFHWTEWWSFFPKVAIDQMTWGPFWNNTYILLLGIMQFRPLKDIWTEIKETTVPLIVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILASAAAE 306
[Close]
BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Match: A0A6V2I5L6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I5L6_9STRA)

HSP 1 Score: 225 bits (573), Expect = 5.220e-64
Identity = 109/247 (44.13%), Postives = 157/247 (63.56%), Query Frame = 1 
Query:  115 RTEEDAAFNRVVNA----GFISSVVLFAIVT-----IFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLSDLAYSR--RETNRWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIEIIWVTILSRQAAEQARA--NDEPD 816
            +T++   F   ++A    GFI++ V+ A++T     + ++D  ++RGWT  E+  RIP+DNW+ Y+S L ++P+  KA TS  VYT+GD  AQ  EG  +  + R R+ RS +AGL+ HGP+SH WY+ S+  +      T  W   PKV +DQ  WGP WN  YI  +G +K DS+E     +  T +PL+++G++LWPLAH VTYG+IP ENRLLWVD +EIIWVTIL+ QA+       + EPD
Sbjct:   81 QTQQQVGFFSNISAKDINGFINTAVVVAVLTALVFKVTSVDAGLTRGWTPEEIATRIPIDNWIGYSSTLHNSPISTKAITSASVYTIGDVIAQKTEGAGMGELDRPRIIRSLLAGLIGHGPMSHFWYEYSEDFFDNVLHLTEWWSFFPKVAIDQATWGPLWNNTYILLLGLMKLDSWERIWGDMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIIWVTILANQASGDGHGAVHGEPD 327
[Close]
BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Match: A0A448Z6W8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6W8_9STRA)

HSP 1 Score: 220 bits (560), Expect = 8.510e-63
Identity = 105/233 (45.06%), Postives = 149/233 (63.95%), Query Frame = 1 
Query:  139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLSDLAYSR---RETNRWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGD---SFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIEIIWVTILSRQAAEQARANDEPDG 819
            N ++N G + +  L ++  + T+D  + RGW+  E+ LRIP+DNW +Y++VL   P+  KA TS  VY +GD+ AQ  EG  +  + R R+ARS +AGLL HGP+SH WY+ S+  +       +N W  A K+ +DQ +WGPFWN  YI  +G +K     SFE+    +  T +PL+++G++LWPLAH VTYG+IP ENRLLWVD +EI WVTIL+  AA     + EP G
Sbjct:   53 NAILNTGVVVAFALLSLNQMATVDVGMMRGWSLEEIALRIPLDNWNSYSAVLSKAPIPTKAATSATVYAIGDFIAQRAEGRTMGELDRPRLARSLLAGLLGHGPMSHFWYEASENVFQNILHLPSNFWGTAAKIGIDQTIWGPFWNNTYILMLGVMKNGRETSFESIWAEMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIXWVTILATTAAA---VDPEPTG 282
[Close]
BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Match: A0A7S2LHE2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHE2_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.760e-61
Identity = 96/228 (42.11%), Postives = 144/228 (63.16%), Query Frame = 1 
Query:  139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLSDLAYSR--RETNRWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIEIIWVTILSRQAAEQARANDEPD 816
            N ++N    +  ++  +  + +++  I RGW+  E+  R+P+DNW +Y ++L   P+  K+ TS  VY +GD  AQ  EGT +  + R R+ RS  AGL+ HGPLSH WY +S+  ++     T+ W   PKVV+DQ LWGPFWN  YI  +G ++          +  T +PLV++G++LWPLAH +TYG++P ENRLLWVD +EI+WVTIL+ QAA    +N+ P+
Sbjct:  104 NTIINTSIFAIALVTVVFQVLSVNVGIIRGWSTEEIAYRVPLDNWNSYNAILAAAPIQTKSITSATVYAIGDTIAQRTEGTEIGELDRGRIGRSLAAGLIGHGPLSHFWYQISEDFFNNVLMWTDWWSFIPKVVIDQTLWGPFWNNSYIVLLGVMQFQKPSQVWADIKRTTIPLVVSGLKLWPLAHCITYGLVPVENRLLWVDMVEIVWVTILATQAAGSVESNEAPE 331
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10097.76.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX44_9PHAE1.130e-10161.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C8Z2_9STRA4.240e-8553.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B7G9T7_PHATC2.090e-6649.77Predicted protein (Fragment) n=3 Tax=Phaeodactylum... [more]
W7TQH1_9STRA2.850e-6646.37Peroxisomal membrane 22 kDa (Mpv17 pmp22) family p... [more]
A0A7S1VV68_9STRA1.630e-6548.85Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2HYH1_9STRA6.650e-6547.25Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2PLY5_9STRA1.530e-6447.73Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6V2I5L6_9STRA5.220e-6444.13Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448Z6W8_9STRA8.510e-6345.06Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2LHE2_9STRA1.760e-6142.11Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10097contigF-distichus_contig10097:3538..10921 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score329.3
Seed ortholog evalue1.7e-87
Seed eggNOG ortholog2880.D7G2C4
KEGG koko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005779,GO:0016020,GO:0016021,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-16_001670.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons5
Model size2056
Cds size822
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10097.76.1prot_F-distichus_contig10097.76.1Fucus distichus monoicouspolypeptideF-distichus_contig10097 4772..10921 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928926.7380674-UTR-F-distichus_contig10097:3537..47711622928926.7380674-UTR-F-distichus_contig10097:3537..4771Fucus distichus monoicousUTRF-distichus_contig10097 3538..4771 -
1690885068.2901416-UTR-F-distichus_contig10097:3537..47711690885068.2901416-UTR-F-distichus_contig10097:3537..4771Fucus distichus monoicousUTRF-distichus_contig10097 3538..4771 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928926.750167-CDS-F-distichus_contig10097:4771..48861622928926.750167-CDS-F-distichus_contig10097:4771..4886Fucus distichus monoicousCDSF-distichus_contig10097 4772..4886 -
1690885068.3029146-CDS-F-distichus_contig10097:4771..48861690885068.3029146-CDS-F-distichus_contig10097:4771..4886Fucus distichus monoicousCDSF-distichus_contig10097 4772..4886 -
1622928926.7625954-CDS-F-distichus_contig10097:5278..55121622928926.7625954-CDS-F-distichus_contig10097:5278..5512Fucus distichus monoicousCDSF-distichus_contig10097 5279..5512 -
1690885068.315114-CDS-F-distichus_contig10097:5278..55121690885068.315114-CDS-F-distichus_contig10097:5278..5512Fucus distichus monoicousCDSF-distichus_contig10097 5279..5512 -
1622928926.7729657-CDS-F-distichus_contig10097:5779..60391622928926.7729657-CDS-F-distichus_contig10097:5779..6039Fucus distichus monoicousCDSF-distichus_contig10097 5780..6039 -
1690885068.3390932-CDS-F-distichus_contig10097:5779..60391690885068.3390932-CDS-F-distichus_contig10097:5779..6039Fucus distichus monoicousCDSF-distichus_contig10097 5780..6039 -
1622928926.783515-CDS-F-distichus_contig10097:6606..67031622928926.783515-CDS-F-distichus_contig10097:6606..6703Fucus distichus monoicousCDSF-distichus_contig10097 6607..6703 -
1690885068.349819-CDS-F-distichus_contig10097:6606..67031690885068.349819-CDS-F-distichus_contig10097:6606..6703Fucus distichus monoicousCDSF-distichus_contig10097 6607..6703 -
1622928926.7978287-CDS-F-distichus_contig10097:10805..109211622928926.7978287-CDS-F-distichus_contig10097:10805..10921Fucus distichus monoicousCDSF-distichus_contig10097 10806..10921 -
1690885068.435072-CDS-F-distichus_contig10097:10805..109211690885068.435072-CDS-F-distichus_contig10097:10805..10921Fucus distichus monoicousCDSF-distichus_contig10097 10806..10921 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10097.76.1

>prot_F-distichus_contig10097.76.1 ID=prot_F-distichus_contig10097.76.1|Name=mRNA_F-distichus_contig10097.76.1|organism=Fucus distichus monoicous|type=polypeptide|length=274bp
EADEFPKANNGSSPHEEDGALSDDPAPSTPNILWWTESRTEEDAAFNRVV
NAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRD
NPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGP
LSHVWYDLSDLAYSRRETNRWVAAPKVVVDQILWGPFWNAVYIWFVGTLK
GDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFIE
IIWVTILSRQAAEQARANDEPDG*
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mRNA from alignment at F-distichus_contig10097:3538..10921-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10097.76.1 ID=mRNA_F-distichus_contig10097.76.1|Name=mRNA_F-distichus_contig10097.76.1|organism=Fucus distichus monoicous|type=mRNA|length=7384bp|location=Sequence derived from alignment at F-distichus_contig10097:3538..10921- (Fucus distichus monoicous)
GAGGCGGACGAGTTCCCCAAGGCCAACAACGGAAGCTCACCACATGAAGA
GGACGGCGCCCTTTCAGACGATCCTGCACCCTCCACACCGAATATTCTGT
GGTGGACAGAGAGCAGGTGATATTTTTCCGCCCTCGTTCGGTCCGGTTTC
CGTCGTTTTGTCGAACGACTATACGTCTTTGTAGAGCTATTCGCTTGCCT
TCAACTATATAATACTATTTTTTGGTTTGGCATTACGTCTACCGTATCTG
GTGTTATCCCGTCGAGAGCTCGGGCAGCCTCAGGATTGCGCGACGGGATC
AATTTTATTGTAAAGACTTGAAACCCCCTCGCAAAATTATCGAATGCAAG
GCCCTCGTCGCCCGAGTGGTCTATAAATAGTAGATAACCACGTACACCTG
CTATTGATGGTGCAGAAGTTGTGAGATCGATTCTTGTCAAAATCATTCTG
GCGTCCGTAGCGGAAAGCGTGGGTACTGATAGTAAGTAAAATTCAATAGC
CATTGGTTGACAAGTTGTAAGAGTGTTGAACTTGCATCGCGATAAAAAAA
TCGTAAGGCGTGAACCGGGGAGAGATGGGAAGATCCTTAGTGAGCACAGG
CAGGATGGCTATGTTTATTTAGGTCCAACGGCTATAAGTGAGGAGCCATG
CTGGCATTGGTGCGCTTTATCGTAGGGGTGCGTTGAGTTAGCTGTGGTCG
GTAAGATCGCTACCTAGCGATCGATCGATCGATAAAATAAAAATAAATTA
AAATGACCCAGATTATAAATTTTCCTTGAGGGCGTTCGCCGGTCCTAATT
TTGTGTTCCAGATCGCCGAGAAATGTCTACCCCCCCCGGCAACATCCCCG
ATCGCACTCCATCAACCTTGCAGCTCGTTAGGCAGGGGGGGGTGCGAGAG
AATACCGGGCGGATGCGAAGGAAATGAACCTCGAAATTCGATCGCCGGGG
CCTCCAAGTAGCTTTAGTAACTCTGACTGACAATATCTTCCTTAGGGCAT
CCTCAGGGCAAACGGCAAGCTCCAAGCGTTTGAGCATGGCGGTTTCCAAG
GGCAGGGTACACGGCCTCGAAGAACAAATAAATACTTGGTGGTCATCCCC
AAACCTTAGTGTGGTCTACAGTTACTGTAATAAGTCCAAGGTGGTTCTTG
ACCTCGCCATCGGTACCAGTATAATTCTATCATATAAGTTCACAGTACTG
TAGAACAGGCTAAACGCGCGGATGTTTTGGTTGCAGATGCGAGCATAGTC
TACTGCGGGCTGTGTTTCCTCCGTACAAAATTAAAACCTGGTAAGGGGAC
CGGGGATCGCGTGACAGGTGGTCGTTCCAGAGTGGAAATCGAGAACTGTA
ACAATACTACTGTACGATACTATTAATAGTAACAATGAATGATATCCCTA
TCATAACCTGTTAATATTATGCAGTATGCAGTGCTCTCAACTGTACCATA
TCAGTTAAGCGTAATCGTGCAAGCAACAATCGGAAGGAGACGGAACTCCC
TGGTTGATTGCTTTGGGTACACGAGAACGTCGCTAAGGTAACGGCTGCCC
TGAGGGTTCAAAATATACTCCGTTGGGGGCATCGGCCCCCTGTCCCCCCC
GACCAAAAATTCAGTATACAGTAACGTTGGCCGTTCTTCTGAGGGGACAG
GGTGTGTAACCCCTCCGTGACTCTTTCTTACAATGAGATGGCTAAGGTAC
GTGGCTGTCCGACATCCGTCCCGAGACAGTCATTCTTGTGGGATCTGGAG
GCTAAGCACCGTGAGGCGATCATTACATCGTGATCTTTCAAAAGGTCTCG
GACCAAGTCCATGTGGGGAGGGATTGCCGCAACGGTGCAGGAGGTCTGGC
TACCCCACGGAAACATCTTCATGAGAGAAACATCCAGGAAGATTATGCCT
GCGAAAAAAAACTTTCATTTCGGTGTGTGCTGTAGGGGAAGTTGGTCAAG
TTGAATGGCCATGAAGCCAGTGGATTCTTGTTTTTATCGCGCAAAGCTCT
TGCAGTCGGTATCCTTCTAGTATCCTTTTATTAATAGTATCCTTTTCAAC
ATGTTCCAAGGAAAGGGCAGGTAGGAGCTACGAATACGTTTAATACGGCC
ATAATAAATTCGTCCAGTCGTCGGATTGACCTTAAGCGTAAATGGTCCAT
TATTAACATTAATGCTAAGTATTTTATTAATAAAGCTACAGTATAATACT
TTTGTATGCATTTATGTGATTATGTATGTATGGTCCATCACATATGTTAA
TAGCAGGGTATGGATCAACAGGATAAGGTTTACAATCCTGCTCGTGGTCA
GCTGAACAGGGAATAATGAATATTTTTCTGTCCCTATTCGCGCCTGAGAA
TCTGGTCTCGTGAGACATGTTCGGCAGTCCCGTCCTGCGCGAGTCTGCTC
ATCTCCATACTCAGCCTGAATGGTGTCTAGTGCTTACTTACGAGATTTCT
CCCGATTTCGGCGGCGGCGTCCATTTTTTATTTTTTAAACCGCCATACGT
CATCGGGTCAGTCCCGAGTTTATCGGGTCACACAATTGTGTTCCGATGGC
GTTCACTGCCGAGAGTGCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGT
TCCAAACGGATGCTGCCTTGGCAGGTCACCATGGACTAATTAATATGCGC
CTCTCTTTCCCACACCCACTATTGGTATGAAGTGGGCATGTTGGAAGTAT
CGGCGGATAATATCGTTATACGACAAACTCTCAAAGCACATTCTTGTGCT
CCGTCGGTATTGTCGTCGGTATTGTTGATCAGCCTTCTTCCCTCCCAAAC
GACACGCTTATTTGTATATACATTCTCGCAATCACACGACTTTTCCCCCA
ATAGGGGCCACGGCCTCACTGGGTGGGATGGATAAATCAGTATGGTAGCT
TCCGATACACGTCTGCATCGCACATGTCCACAGCAGGATTGGCAACCTTA
CACGATTGATCCATACTCTGCTACATATAATGACCACACATGAATACTGC
ACCGACAGTAAGTATGAATGGGAAAAGGAGCGCACAAAAAAATGGCCCAT
GATGATACCTGAAAAGGCAGCACATGTTAGTCGAACTACCTTGAGGACTG
TTGCCGGCGAACTCTCGGCAGTGATCACCATCGGTACGCCATGTGCGACC
TGATCAACTCTAATACAGTAGGGACTGACCCGACGGAGGTTGAAGGTATA
AATAGACTCCGTAGTGGAAAGCGGGAGAACTCCGACGAGTAAGCACCAGA
TGCAGCCTGAGAGTAGAGAATAAGCATGCTGACGCGGGACGGGACGGCCG
AACCCGTCTCGCGAGACCAAATTCTCAGGCGCAAACGAGGACAGGGAAAA
AATATTTTTCCCTGTTCAGCTGACCATGAGCAGGATTGACAGCCTTACCC
GGTTGATCCATAACTCTTCTACAGCATAAGTGATGACCCTTACATACATA
CACATATCTATGTATTCGAAGAAGTTTGGAAAAAAAAGTGCGATACATCA
AAATAACGCCCATTCAATATTATAACGAGAGAAAATGAAGAGTGTTAGAT
TGGTGCTACAGCAAACCAGCGATGCCATGAAATTGGGTTCTCGCGTCGAT
CGCGCGTGCCGCCGCCCCGATAGAGTCGTAGACGGCTCTGCCAACGCCAT
CCGCGGGTGAGGTGCTTCCACCTTCTGCACTTCAAGCGGACGCTTTAGCG
CCTTCGATCATGTCGCGTAGATTGCCTATGCTCTTGGCTGCTGCATGACG
TTTTATCGGTGATGAATGCCAAGGGATCTCATGTTGACGATTTTCAATAT
GCTTATCACGCGACCCCCATCACGATCGTCATGAGAAGCCGGTTTATGCA
CGTTGTGACAATCGTCATGCCGATCTCCATGCCGACTGTCAAAATAGCAC
TGGTCCTAACTTGCATGGTCGTCACGACGAGTGCCATATATATATATTTC
CCCTGGATGGTGTCAAGGGAGGACACGGATACACTTTCGAATATATTAAG
GGCTAACATTATTTTCGGGGAAACGAAACAGGGTGAGTGAGGGAGGAAAG
AAAAAGGGGTATGGTGCTCATAATGCACCCGAGCAATGGCGTCCCCTCCC
CCTTGCTCTGCCTCGGGCGGTCTTCAATCGCATGCAAGCCCTAACGCGAC
TGCTTCAAATTGACAGACGCCCGTCACACGGCCTCCTCGCGCGTTCCTGT
ACACTCTCGACTCGAAAGGACGGAGGAAGATGCCGCGTTCAATCGGGTGG
TAAACGCCGGATTCATTTCGTCGGTTGTCCTTTTCGCGATCGTCACCATC
TTCACTATCGACACGGTAAGCCATAATAGTCGCTCCGAACGGATCGCCGG
TACGCGAACTTGCCCCCCTTTTATTTGCCCCCCCTTCCGGCAACTCACCT
TTGCTTTCCCATGAGTGTAAAGCGAACGAGGCCAGGAGATCGGAGAAAGG
CTTTACCAAGCTTTCGACGACCTCGTTGACCGGGGACTTTGCGGTTTGTG
TTTGGATGTAACGCGGGCAACCAGCGTGTCGATTGACCTCGCCTTGTGGG
CTGGGCTTGACGAACGGTCCCTCGTGGCATCTGGAGCTAGAATGTGACAA
TGTGACGTGGTGATCGAGCGAGCCCAAGAGACTAAACTTTAAATTTGCCT
CAACGATTGGCCGCGATGACGTCATGTGCTTCGGAAACACGGACGATGAG
TGACGGAACCTTCGCCGCCTTTTATTCCTAGACGGGTGACCGTTCGGCTT
AAAACAGCCCTCACAATCTGGTCGAGAAGGGTAATGCCGAGCGAGACCTT
TCAGCTCTGCTCATCAGGCCAAAGACGACCCGCGCTTACACGAATCACGA
ACGCCGGCGCATCGGCACACCAAAACTCGCAGGAGATTTCACGGGGCTGG
ACCGCGGGCGAGGTCATCCTGAGGATCCCCGTAGACAACTGGCTCGCGTA
CACGAGCGTGTTACGAGACAACCCCGTGCTGGTGAAGGCTTGTACGAGCG
GGATCGTCTACACCTTGGGCGATTGGACGGCGCAAACATTCGAGGGCACA
GCCCTGGAGAGTATCAAGAGGGACCGAGTAGCGCGCTCGGCGGTGGCTGG
GCTGCTTCTTCACGGACCGCTCAGTCACGTCTGGTACGACCTGTGCGAGC
GCATGTTCGATTTCATCGACTGGAACGACTTCTGGTGAGTGGCCCTCTCC
ACATTACGTTGGACCTACGTTATCTTGTGGAGTCGGGACTGCCTGAGGAG
GCTCTGGAGTGTAACGGTGTTTTCGTTACGTTGCCGCGTGGCACTTGGAA
ATAGCAAAAGTGAAGGGCGGGGGGGAATCTTCCCGTGGCGCTTTCATTCG
TAGTTTCACGTCTAGCAGTATTTATGTTAATGCTCCTTCGATGCAGCTAA
TGTCATAAGAAGCGATCTCGCCTACTCTCGGCGAGAAACAAACAGGTGGG
TTGCTGCGCCCAAGGTTGTCGTCGACCAGATCCTATGGGGTCCGTTCTGG
AACGCCGTGTACATCTGGTTTGTCGGCACTCTCAAGGGAGACTCGTTCGA
GACTAATCGGGAGGCGGTCGTCACGACAGCCTTACCGCTGGTTATTGCGG
GAATTCGTTTGTGGCCCTTGGCACACCTCGTCACCTACGGCGTGTAAGTG
CAGGCATGCCACACGGGTGGTGGATGGGATGAAATCGATGATTTGTGCAG
CACAGAGCACGTGCCTCCATTTACACCTTTCCCCGCCGAGGCTGTTGCTC
GTTCGCATATACCCACAACACACTCTAGGTGACGCTGCGTGGTAACTTAT
GCTTTTGACATGTTGAGAGACAAACACCCTCTGGATGAATAATAGGGGGA
AGTTCATCTACGATCCTTCTATCCTCGTGTACACGCACCTCCCTGTGCTG
TCGTAGGATGTTTCATACGTGCTTCTCGCACACGCTTAAATTGGCCTGGA
GAACAGGTTGTGATGATCACTTTCCGCATCAGGCGAGACACTAAGCTTGA
CCCCCCCAGTCCCATCCCCTTACACGCTGGCGTAGAATACCGACCGAGAA
CCGGCTGCTGTGGGTCGACTTTATCGAGATAATCTGGGTCACGATCCTCA
GCAGGCAGGCGGCGGAGCAGGCGCGCGCCAACGACGAGCCGGATGGGTAG
TCTGCCGCGGCGGGCGAAGTGCAGGAAGAGGCGGGGACGTAGGCGGAGAT
GGAGCCGGCGATAAAAAGGAAAACGGCGCTGTAATCACGTGATTTGACTA
GGCGGACGAAGCGTGTGGTGTAACCATGCGGGCAGAACAGGGCGAACGCA
AATATCAACCACGATTTTCACACAATACGCGGAGGAAAAGAAATGACTCT
ACAGTATGACCGTTTCATTCACTTGCTGGCGACGCCGGGGACGTCAAACG
CCTGGCCGGTGGGGCAACGTAGACTGTTGGACAATCGAAGCGGGCTTTTG
AATGCCGCGCTCACATGGTCAAGGGAGGGGCGGTCTGGTCAGCTAACTGA
AGAGCTAAGCGCAGGGAGGAAATTCTCTGGCGCGTGTAGAAGTATAATGT
CTTTTTTTTATGTAAGTTGTCGAGAAAGAGGTTTATGCCGGATTAGGGGG
TCGGGGAGTGAAGGAAGAGCCATGGCACGGGCTGCATGACCGGGATGGGA
CGCTGGACATATGTGAAATAAAGCCGTTGTGATTGATGTCCCACCCCAGG
GGCGAAGGACCCGCGCGGGAAATGCACTATAAAACCACGCAGGCCGGGGA
TGTGTTATCCCGTAAGCCTACCCGGAGGGTGTGATCGACTTTCGTACCTA
TTTATGATGTAAAAAATCATGTCCCATGTCCAGTTGTCTGTTATTTGAGA
GGTTCTGATATCCTTGCGTTGTCCGTCTTAGGTGTTACAAATGAGTGTGC
GAAAGAAGTTGTGCCTCGGAATTTCATGTCTTGCTACCCAATTCAAGTAC
ACTATTTCGGAGCTGGGTTTTACAGTTACAGTCCGTTTTTAATTGTGCGG
AGGGGCATTTCAAACGGCTTGCGAATAATTTTCTCACGTGTATGTCTATA
TTTATACTTCGTGTTCGCATAGGGAGCCTAAATTTGTTAACGGGGAATCC
AAATTTTAATGGTAAGGTAAAAAAATGTAATGGTGAGAAGTGTTCAAATT
CGAGGATATTTGGGGCTGTGGCAATGCCGTCGTTGGCTACAGCTCGCAGT
TTCAGTCATATTTCGGTTCAGAGAAAGGTTGTCGATCGCTTGCATAGACT
ATGCATTTTGTATATGGTGTCAAAAGCTCCTTGCTACCATGATCGTCTTT
TGATGCATGTTTGAATAGGCTTCACACGATGTTCAGCCTCGGTGGGTCAG
GGATGCATATATGACGTCTTGATGGGATCGGGCG
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Coding sequence (CDS) from alignment at F-distichus_contig10097:3538..10921-

>mRNA_F-distichus_contig10097.76.1 ID=mRNA_F-distichus_contig10097.76.1|Name=mRNA_F-distichus_contig10097.76.1|organism=Fucus distichus monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at F-distichus_contig10097:3538..10921- (Fucus distichus monoicous)
GAGGCGGACGAGTTCCCCAAGGCCAACAACGGAAGCTCACCACATGAAGA
GGACGGCGCCCTTTCAGACGATCCTGCACCCTCCACACCGAATATTCTGT
GGTGGACAGAGAGCAGGAGGCGGACGAGTTCCCCAAGGCCAACAACGGAA
GCTCACCACATGAAGAGGACGGCGCCCTTTCAGACGATCCTGCACCCTCC
ACACCGAATATTCTGTGGTGGACAGAGAGCAGGACGGAGGAAGATGCCGC
GTTCAATCGGGTGGTAAACGCCGGATTCATTTCGTCGGTTGTCCTTTTCG
CGATCGTCACCATCTTCACTATCGACACGGACGGAGGAAGATGCCGCGTT
CAATCGGGTGGTAAACGCCGGATTCATTTCGTCGGTTGTCCTTTTCGCGA
TCGTCACCATCTTCACTATCGACACGGAGATTTCACGGGGCTGGACCGCG
GGCGAGGTCATCCTGAGGATCCCCGTAGACAACTGGCTCGCGTACACGAG
CGTGTTACGAGACAACCCCGTGCTGGTGAAGGCTTGTACGAGCGGGATCG
TCTACACCTTGGGCGATTGGACGGCGCAAACATTCGAGGGCACAGCCCTG
GAGAGTATCAAGAGGGACCGAGTAGCGCGCTCGGCGGTGGCTGGGCTGCT
TCTTCACGGACCGCTCAGTCACGTCTGGTACGACCTGAGATTTCACGGGG
CTGGACCGCGGGCGAGGTCATCCTGAGGATCCCCGTAGACAACTGGCTCG
CGTACACGAGCGTGTTACGAGACAACCCCGTGCTGGTGAAGGCTTGTACG
AGCGGGATCGTCTACACCTTGGGCGATTGGACGGCGCAAACATTCGAGGG
CACAGCCCTGGAGAGTATCAAGAGGGACCGAGTAGCGCGCTCGGCGGTGG
CTGGGCTGCTTCTTCACGGACCGCTCAGTCACGTCTGGTACGACCTAAGC
GATCTCGCCTACTCTCGGCGAGAAACAAACAGGTGGGTTGCTGCGCCCAA
GGTTGTCGTCGACCAGATCCTATGGGGTCCGTTCTGGAACGCCGTGTACA
TCTGGTTTGTCGGCACTCTCAAGGGAGACTCGTTCGAGACTAATCGGGAG
GCGGTCGTCACGACAGCCTTACCGCTGGTTATTGCGGGAATTCGTTTGTG
GCCCTTGGCACACCTCGTCACCTACGGCGTAAGCGATCTCGCCTACTCTC
GGCGAGAAACAAACAGGTGGGTTGCTGCGCCCAAGGTTGTCGTCGACCAG
ATCCTATGGGGTCCGTTCTGGAACGCCGTGTACATCTGGTTTGTCGGCAC
TCTCAAGGGAGACTCGTTCGAGACTAATCGGGAGGCGGTCGTCACGACAG
CCTTACCGCTGGTTATTGCGGGAATTCGTTTGTGGCCCTTGGCACACCTC
GTCACCTACGGCGTAATACCGACCGAGAACCGGCTGCTGTGGGTCGACTT
TATCGAGATAATCTGGGTCACGATCCTCAGCAGGCAGGCGGCGGAGCAGG
CGCGCGCCAACGACGAGCCGGATGGGTAGAATACCGACCGAGAACCGGCT
GCTGTGGGTCGACTTTATCGAGATAATCTGGGTCACGATCCTCAGCAGGC
AGGCGGCGGAGCAGGCGCGCGCCAACGACGAGCCGGATGGGTAG
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