mRNA_F-distichus_contig100925.75.1 (mRNA) Fucus distichus monoicous
|
Overview
Homology
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Match: A0A6H5KPW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW3_9PHAE) HSP 1 Score: 239 bits (609), Expect = 1.110e-68 Identity = 154/299 (51.51%), Postives = 169/299 (56.52%), Query Frame = 1
Query: 1 GIVSPVDMVFATDWPPPGSTALTEEPVMYIGPDSIGLVQHAP---------------------------------------------RFRT-ERILDLCCGSGVQGIAAAALRGGNARVTCVDINPRAVRFARFNAALNGLDSR-------RFRAAVGDLYGA--EAQGQGFPLPRA-----ADG---------------------------------APSSSYDLILANPPFVPVPPRLGRAKRRYDGFAYGGASGEEVLSRIFCEAVERLRPG-GVLADVTELANPRDFGAKLGRWI 615
G+V+ DMVFATDWPPPGSTALTEEPVMYIGPDSIGLVQH P R+R E ILDLC GSGVQGIAAA LRGG A VTCVDINPRAVRF+RFNA LNGL++ RFRA VGDLYGA G F RA ADG + SS YDLILANPPFVPVPPRL A+RRYD FA GG++GE+V+ IF A +RLRPG G+LA V+ELANPR F AKL WI
Sbjct: 476 GVVAASDMVFATDWPPPGSTALTEEPVMYIGPDSIGLVQHVPPKSRRGQVEMPERATVVPPQAGSEGGSGKDLDSQCAGGESGDRRRRYRAPEEILDLCSGSGVQGIAAAVLRGGEASVTCVDINPRAVRFSRFNALLNGLNTGGGEEEGGRFRAVVGDLYGALDSTVGDRFSADRAGGLPDADGDNDLTGNERGGHQPSPGAGTSGATPTTRTPASSSSSSLYDLILANPPFVPVPPRLASARRRYDVFASGGSNGEKVIEGIFRGAFDRLRPGSGLLAMVSELANPRTFDAKLRCWI 774
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Match: A0A7S4KP11_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KP11_GUITH) HSP 1 Score: 199 bits (505), Expect = 9.710e-56 Identity = 123/268 (45.90%), Postives = 161/268 (60.07%), Query Frame = 1
Query: 22 MVFATDWPPPGSTALTEEPVMYIGPDSIGLVQHAPRFRTERILDLCCGSGVQGIAAAALRGGNARVTCVDINPRAVRFARFNAALNGLDSRRFRAAVGDLYGAEAQGQGFPLPRAADGAPSSS-YDLILANPPFVPVPPRLGRAKRRYDGFAYGGASGEEVLSRIFCEAVERLRPGGVLADVTELANPRDFGAKLGRWIV-APPRPDGRAVPGACHGCEAVVFHEERLWSAAEYSAKRAGSEKEARGWAGHLDLVGIEEMAPGFIFVR 819
++ TD PP S AL EEPVMYIGPDS+GLV HAPR E +LDLCCGSG+QGIAAA L G +VTCVDIN RAVRFARFNA +NG+ SR + GDLY + G + ++ S +++IL+NPPFVPVP L + +RY+ FA GG GE VL RI A L GG +A VTE+ ++ RW++ + P + R C V EE +++ A YS RAG++ E W HL + IE + G+IF++
Sbjct: 354 LLMVTDLMPPCSAALEEEPVMYIGPDSLGLVHHAPRKEEEAVLDLCCGSGIQGIAAAKLYGK--QVTCVDINERAVRFARFNAMINGVASR-VKVLQGDLYDFHEK-MGHEMGSESEVVMSQRRFNVILSNPPFVPVPFDLKKRVKRYNVFADGGEDGEAVLKRIITGASRHLAAGGRVAIVTEIFCAHLLPERMKRWLIESSPLSESRG--RRRWRCLVHVDKEENMYTPATYSEARAGNKVERLEWEEHLKKMRIETVGRGYIFLK 615
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Match: D8LCV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV5_ECTSI) HSP 1 Score: 196 bits (497), Expect = 5.840e-54 Identity = 135/274 (49.27%), Postives = 146/274 (53.28%), Query Frame = 1
Query: 79 VMYIGPDSIGLVQHAP---------------------------------------------RFRT-ERILDLCCGSGVQGIAAAALRGGNARVTCVDINPRAVRFARFNAALNGLDSR-------RFRAAVGDLYGA-----------EAQGQGFP----------------LPRAADG--------------APSSSYDLILANPPFVPVPPRLGRAKRRYDGFAYGGASGEEVLSRIFCEAVERLRPG-GVLADVTELANPRDFGAKLGRWI 615
VMYIGPDSIGLVQH P R R E ILDLC GSGVQGIAAA LR G A VTCVDINPRAVRF+RFNA LNGLD+ RFRA VGDLYGA ++ G GFP P DG + SS YDLILANPPFVPVPPRL A+RRYD FA GG++GEEV+ IF A +RLRPG G+LA VTELANPR F AKL RWI
Sbjct: 235 VMYIGPDSIGLVQHVPPKSRRGQGEMPESATVVPPQARSGGEDGKGLDRQCVGGESGGQRRRHRAPEEILDLCSGSGVQGIAAAVLRRGEASVTCVDINPRAVRFSRFNALLNGLDTGGGEQEGGRFRAVVGDLYGALDSTVGDRVSADSAG-GFPDADDDNDLNGSESGGHQPSPGDGTSGATPTTRTPASSSSSSLYDLILANPPFVPVPPRLASARRRYDVFASGGSNGEEVIEGIFRGAFDRLRPGSGLLAMVTELANPRAFDAKLRRWI 507
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Match: L1IFL4_GUITC (MTS domain-containing protein n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IFL4_GUITC) HSP 1 Score: 188 bits (478), Expect = 3.450e-53 Identity = 123/285 (43.16%), Postives = 161/285 (56.49%), Query Frame = 1
Query: 22 MVFATDWPPPGSTALTEEPVMYIGPDSIGLVQHAPRFRTERILDLCCGSGVQGIAAAALRGGNARVTCVDINPRAVRFARFNAALNGLDSRRFRAAVGDLYGAEAQGQGFPLPRAADGAPSSS-YDLILANPPFVPVPPRLGRAKRRYDGFA-----------------YGGASGEEVLSRIFCEAVERLRPGGVLADVTELANPRDFGAKLGRWIV-APPRPDGRAVPGACHGCEAVVFHEERLWSAAEYSAKRAGSEKEARGWAGHLDLVGIEEMAPGFIFVR 819
++ TD PP S AL EEPVMYIGPDS+GLV HAPR E +LDLCCGSG+QGIAAA L G +VTCVDIN RAVRFARFNA +NG+ SR + GDLY + G + ++ S +++IL+NPPFVPVP L + +RY+ FA GG GE VL RI A L GG +A VTE+ ++ RW++ + P + R C V EE +++ A YS RAG++ E W HL + IE + G+IF++
Sbjct: 171 LLMVTDLMPPCSAALEEEPVMYIGPDSLGLVHHAPRREEEAVLDLCCGSGIQGIAAAKLYGK--QVTCVDINERAVRFARFNAMINGVASR-VKVLQGDLYDFHEK-MGHEMGSESEVVMSQRRFNVILSNPPFVPVPFDLKKRVKRYNVFADGRNENTRVKQIRLILVAGGEDGEAVLKRIITGASRHLAAGGRVAIVTEIFCAHLLPERMKRWLIESSPLSESRG--RRRWRCLVHVDKEENMYTPATYSEARAGNKVERLEWEEHLKKMRIETVGRGYIFLK 449
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Match: A0A7S2SRA9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRA9_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.710e-51 Identity = 129/312 (41.35%), Postives = 159/312 (50.96%), Query Frame = 1
Query: 16 VDMVFATDWPPPGSTALTEEPVMYIGPDSIGLVQHAPRFRT----------------ERILDLCCGSGVQGIAAAALRGGNARVTCVDINPRAVRFARFNAALNGL-------DSRRFRAA---VGDLYGAEAQGQGFPLPRAADGAPSSS---YDLILANPPFVPVPPRLGRAKRRYDGFAYGGASGEEVLSRIFCEAVERL---------RPGGVLAD------VTELANPRDFGAKLGRWIVAPPRPDGRAVPGACHGCEAVVFHEERLWSAAEYSAKRAGSEKEARGWAGHLDLVGIEEMAPGFIFVR 819
VDM ATDW PP + L E PVMYIGPDS+ L++H PR + E LDLCCGSGVQG+ A + G VT VD+NPRAVRF+RFNAA+NG S F GDLY A LP DG S Y +ILANPPFVPVPP L + RYD FA GGA+G+EVL R+ A++ L R G L D V+E+ PR + + IV RAV C A + H+ +SA Y+ +R+ S KE W HLD GI EM+ +F+
Sbjct: 19 VDMWLATDWCPPLAVDLRESPVMYIGPDSMALLRHLPRRTSWPKSTPHEVAPIGGPPEAWLDLCCGSGVQGLGAL-VSGRADTVTFVDVNPRAVRFSRFNAAMNGFAQATGVDSSSAFPGCQFFTGDLYNA--------LPTTKDGLVESHQNRYQVILANPPFVPVPPDLNKEYHRYDVFADGGAAGDEVLRRVVEGAMKHLDLGGDEHAHRGGAALRDTGKVFIVSEVPQPRSYVEDVLGPIVT------RAVGE--RPCVAALVHDHPPFSAVTYARRRSSSPKELEAWTAHLDAHGITEMSNALVFLH 313
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Match: A0A836C8B5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B5_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.020e-45 Identity = 115/256 (44.92%), Postives = 134/256 (52.34%), Query Frame = 1
Query: 82 MYIGPDSIGLVQH--APRFRTER-----ILDLCCGSGVQGIAAAAL---RGGNARVTCVDINPRAVRFARFNAALNGLDSRRFRAAVGDLYGAEAQGQGFPLPRAADGAPSSSYDLILANPPFVPVPPRLGRAKRRYDGFAYG-GASGEEVLSRIFCEAVERLRPGGVLADVTELANPRDFGAKLGRWIVAPPRPDGRAVPGACHGCEAVVFHEERLWSAAEYSAKRAGSEKEARGWAGHLDLVGIEEMAPGFIFV 816
MYI S+ LVQH A R R E +LDLCCGSGVQGIAAAA RGG VT VD++ RAVRF RFNAALNGL +R A GDLY +A G +Y ILANPPFVPVPP L RYD FA G GA GE VL + A LRPGG LA V+E+A+ F L +W + G A + SA EY +RAGS E W HL IE ++ F++V
Sbjct: 1 MYISTCSVALVQHWHAARQRLETALPETVLDLCCGSGVQGIAAAAAAAARGGECSVTAVDVSARAVRFTRFNAALNGL-ARCVTAVQGDLY-------------SASGIGDRTYAAILANPPFVPVPPALNAISNRYDVFAAGPGARGEGVLRGVIEGACAHLRPGGTLAIVSEVADVERFVGALPQWWSS--------------GSSAQDSVLQPAMSALEYCQRRAGSSNEVEAWVTHLASESIESLSQAFMWV 228
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Match: A0A8J7YZ50_9CYAN (Methyltransferase n=1 Tax=Myxacorys almedinensis A TaxID=2690445 RepID=A0A8J7YZ50_9CYAN) HSP 1 Score: 149 bits (376), Expect = 5.240e-37 Identity = 89/183 (48.63%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 64 LTEEPVMYIGPDSIGLVQHAPRFRTERILDLCCGSGVQGIAAAALRGGNARVTCVDINPRAVRFARFNAALNGLDSRRFRAAVGDLYGAEAQGQGFPLPRAADGAPSSSYDLILANPPFVPVPPRLGRAKRRYDGFAYGGASGEEVLSRIFCEAVERLRPGGVLADVTELANPRDFGAKLGRW 612
L+E+PVMYIG DS+GLV AP+ R+LDLCCGSGVQG+ A+ V VDINPRA+RF+RFNA LNG+D+ RF +GDLY A S ++ ILANPPFVP P R R F GGA+GE++L+RI E+ L P G L VT+L N + AKL RW
Sbjct: 873 LSEDPVMYIGMDSLGLVHTAPQSTVSRVLDLCCGSGVQGLVASRYAR---EVLSVDINPRAIRFSRFNAQLNGIDNIRFH--LGDLYEAA----------------SGYFNTILANPPFVPSPSRDCR-------FRDGGATGEDILARIISESANHLAPHGRLFIVTDLVNLSAYEAKLKRW 1027
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Match: A0A2E3MT00_9PLAN (Carbamoyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3MT00_9PLAN) HSP 1 Score: 147 bits (371), Expect = 2.430e-36 Identity = 90/183 (49.18%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 64 LTEEPVMYIGPDSIGLVQHAPRFRTERILDLCCGSGVQGIAAAALRGGNARVTCVDINPRAVRFARFNAALNGLDSRRFRAAVGDLYGAEAQGQGFPLPRAADGAPSSSYDLILANPPFVPVPPRLGRAKRRYDGFAYGGASGEEVLSRIFCEAVERLRPGGVLADVTELANPRDFGAKLGRW 612
LTE+PVMYIG DS GLVQ APR+R+ LDLCCGSG+QGI A+ + RV VD+NPRAVR ARFNA LNG+++ R GDL+ + +D +LANPPFVP P A+ R F GGA+GE+VL RI EA E L P G +A VT+L N +G KL W
Sbjct: 881 LTEQPVMYIGMDSHGLVQAAPRWRSMATLDLCCGSGIQGIVASRY---SRRVVSVDVNPRAVRVARFNAQLNGVENLEIRR--GDLF---------------EPVRGDRFDAVLANPPFVPSP----NAEYR---FRDGGANGEQVLRRIIQEAAEHLTPTGRIAVVTDLVNVDRYGTKLDSW 1036
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Match: A0A7S1XYP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYP2_9STRA) HSP 1 Score: 140 bits (352), Expect = 3.790e-36 Identity = 96/245 (39.18%), Postives = 135/245 (55.10%), Query Frame = 1
Query: 142 RILDLCCGSGVQGIAAAALRGGNARVTCVDINPRAVRFARFNAALNG--LDSRRFRAAVGDLYGAEAQGQGFPLPRAADGAPSSSYDLILANPPFVPVPPRLGRA------------KRRYDGFAYGGASGEEVLSRIFCEAVERLRPGGVLADVTELANPR-----DFGAKLGRWIVAPPRPDGRAVPGACHGCEAVVFHEERLWSAAEYSAKRAGSEKEARGWAGHLD-LVGIEEMAPGFIFV 816
RILD+CCGSGVQ IAAA L +A +T VD++PRA+RF+ FNAALNG ++ G L G A+ ++ AP +DL+LANPPFVPVPP +RRY GFA GG SGE+VL +I A +RLRPGGV A V+E R D+ ++G + A P+ ++ +++ ++ Y+ +R+GSE E W HL+ +G+E MA G ++V
Sbjct: 21 RILDVCCGSGVQAIAAARLWNRSADITFVDLSPRALRFSLFNAALNGCTIEGDAAPGGGGALSGVTARA--LLSDALSEVAPDPKFDLLLANPPFVPVPPXXXXXXXXXXXXXXXXLRRRYTGFADGGGSGEDVLIKILSGATQRLRPGGVAAVVSEYFFRRGNWRRDWAQRIGVALAAG-GPEAESM-------RSMLVCDDPPLDLDTYAQRRSGSEAEREIWRRHLEEALGLEAMATGLLYV 255
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Match: UPI001F15CF9D (methyltransferase n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F15CF9D) HSP 1 Score: 145 bits (365), Expect = 1.530e-35 Identity = 85/183 (46.45%), Postives = 111/183 (60.66%), Query Frame = 1
Query: 64 LTEEPVMYIGPDSIGLVQHAPRFRTERILDLCCGSGVQGIAAAALRGGNARVTCVDINPRAVRFARFNAALNGLDSRRFRAAVGDLYGAEAQGQGFPLPRAADGAPSSSYDLILANPPFVPVPPRLGRAKRRYDGFAYGGASGEEVLSRIFCEAVERLRPGGVLADVTELANPRDFGAKLGRW 612
L EEPVMY+G DS+GLV AP+ R+LDLCCGSG+QG+ A+ V VDINPRA+RFARFNA LNG+++ +F +G+L+ A S ++ ILANPPFVP P R + F GGASGE++L+RI E+ L P G L VT+L N +++ AKL RW
Sbjct: 877 LDEEPVMYLGMDSMGLVHTAPQIPVSRVLDLCCGSGIQGLVASRYAR---EVVGVDINPRAIRFARFNAQLNGINNIQFH--LGNLFEAA----------------SGYFNTILANPPFVPSPNREVK-------FRDGGASGEDILARIISESANHLAPQGHLFIVTDLVNVQEYEAKLERW 1031 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100925.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig100925.75.1 >prot_F-distichus_contig100925.75.1 ID=prot_F-distichus_contig100925.75.1|Name=mRNA_F-distichus_contig100925.75.1|organism=Fucus distichus monoicous|type=polypeptide|length=266bp MVFATDWPPPGSTALTEEPVMYIGPDSIGLVQHAPRFRTERILDLCCGSGback to top mRNA from alignment at F-distichus_contig100925:851..2077+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig100925.75.1 ID=mRNA_F-distichus_contig100925.75.1|Name=mRNA_F-distichus_contig100925.75.1|organism=Fucus distichus monoicous|type=mRNA|length=1227bp|location=Sequence derived from alignment at F-distichus_contig100925:851..2077+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig100925:851..2077+ >mRNA_F-distichus_contig100925.75.1 ID=mRNA_F-distichus_contig100925.75.1|Name=mRNA_F-distichus_contig100925.75.1|organism=Fucus distichus monoicous|type=CDS|length=1596bp|location=Sequence derived from alignment at F-distichus_contig100925:851..2077+ (Fucus distichus monoicous)back to top |