mRNA_F-distichus_contig10091.71.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10091.71.1
Unique NamemRNA_F-distichus_contig10091.71.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Match: A0A6H5JZ96_9PHAE (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ96_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 1.140e-44
Identity = 74/102 (72.55%), Postives = 84/102 (82.35%), Query Frame = 1
Query:    1 LAELPLWTSSEGGDFISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHVTKYRNVEICLYTHSMGGVTRNDIIEAKLLDQLPVEYSPKWLKEH-PEAAAVP 303
            LA LPLWTS+  GDFI R FVAKNFV+AMAFLN VA VAE QGHHPDLH+T+YRNVEI L THSMGGVT+NDI EA+L DQL V YSPKW +E+ P++A  P
Sbjct:   35 LASLPLWTSTPNGDFIVRSFVAKNFVSAMAFLNEVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTQNDIAEARLFDQLSVTYSPKWQRENLPDSATPP 136          
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Match: D7G856_ECTSI (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G856_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 4.640e-44
Identity = 75/102 (73.53%), Postives = 85/102 (83.33%), Query Frame = 1
Query:    1 LAELPLWTSSEGGDFISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHVTKYRNVEICLYTHSMGGVTRNDIIEAKLLDQLPVEYSPKWLKEH-PEAAAVP 303
            LA LPLWTS+  GDFI R FVAKNFV+AMAFLN VA VAE QGHHPDLH+T+YRNVEI L THSMGGVT+NDI EA+L DQLPV YSPKW +E+ P++A  P
Sbjct:  183 LASLPLWTSTPNGDFIIRSFVAKNFVSAMAFLNEVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTQNDIAEARLFDQLPVTYSPKWQRENLPDSATPP 284          
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Match: K8Z8Y7_NANGC (4a-hydroxytetrahydrobiopterin dehydratase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z8Y7_NANGC)

HSP 1 Score: 132 bits (332), Expect = 3.620e-37
Identity = 59/97 (60.82%), Postives = 73/97 (75.26%), Query Frame = 1
Query:    1 LAELPLWTSSEGGDFISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHVTKYRNVEICLYTHSMGGVTRNDIIEAKLLDQLPVEYSPKWLKEHPEA 291
            L  LPLW  S+    +SR F AKNF AA+AF++ V  VAE +GHHPDLH+T YR VE+ LYTH++GG+T ND+I A L+D +P  YSPKWLKEHPEA
Sbjct:   76 LPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTIPASYSPKWLKEHPEA 172          
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Match: A0A6U3RQ02_9STRA (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3RQ02_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.920e-35
Identity = 60/98 (61.22%), Postives = 74/98 (75.51%), Query Frame = 1
Query:    1 LAELPLWTSSEGGDFISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHVTKYRNVEICLYTHSMGGVTRNDIIEAKLLDQL-PVEYSPKWLKEHPEA 291
            L  LPLW  SE G  ISR FVAKNF AA+ ++N    +AE  GHHPDLH+T+YRNV + L+THS+GG+T ND + A+ LD + PV+YSPKWLKEHPEA
Sbjct:   76 LGNLPLWKLSEDGTKISRGFVAKNFQAALDWINTAGHIAELNGHHPDLHITQYRNVCVTLWTHSVGGLTENDFLLAEQLDTVAPVKYSPKWLKEHPEA 173          
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Match: A0A6U0TCE5_9STRA (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TCE5_9STRA)

HSP 1 Score: 124 bits (312), Expect = 5.120e-34
Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 1
Query:   13 PLWTSSEGGDFISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHVTKYRNVEICLYTHSMGGVTRNDIIEAKLLDQLPVEYSPKWLKEHPEAAA 297
            PLW+ +E G  + R FVAKNF AA+ F+N V  +AE +GHHPDLH+T YR V + +YTHS+ G+T ND + A L+D LPV YSPKWL+EHPEA A
Sbjct:   92 PLWSVTEEGR-LERSFVAKNFQAALDFVNAVGVIAEREGHHPDLHITSYRTVTVQMYTHSLNGLTENDFVMASLIDALPVTYSPKWLREHPEAKA 185          
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Match: A0A7S1N220_9EUGL (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N220_9EUGL)

HSP 1 Score: 123 bits (308), Expect = 1.050e-33
Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 1
Query:    7 ELPLWTSSEGGDFISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHVTKYRNVEICLYTHSMGGVTRNDIIEAKLLDQLPVEYSPKWLKEHPE 288
            ++PLW  S  GD ISR FVAKNFV AMA+L +V E+AEA+GHHPDLH+T+YR V I +++HS+ G+T ND I A  +D + VEYSPKWLK  PE
Sbjct:   56 QVPLWQLSAAGDRISRSFVAKNFVVAMAYLQQVGEIAEAEGHHPDLHLTEYRTVTIEVFSHSVKGLTPNDFILAAKIDMVEVEYSPKWLKGQPE 149          
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Match: A0A812W6D9_9DINO (4a-hydroxytetrahydrobiopterin dehydratase (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812W6D9_9DINO)

HSP 1 Score: 122 bits (305), Expect = 2.620e-32
Identity = 56/94 (59.57%), Postives = 71/94 (75.53%), Query Frame = 1
Query:   10 LPLWTSSEGGDFISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHVTKYRNVEICLYTHSMGGVTRNDIIEAKLLDQLPVEYSPKWLKEHPEA 291
            LPLW  S  G  ISR FVAKN+ AAM+FLN V+ +AE +GHHPD+H+T YRNV + L TH++GG++  D + A  +DQ+ VEYSPKWLKEHP A
Sbjct:  153 LPLWALSPDGASISRCFVAKNWAAAMSFLNEVSVLAEQEGHHPDVHITSYRNVRVELSTHAIGGLSLPDFVLAAKMDQIKVEYSPKWLKEHPVA 246          
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Match: A0A7S4UVR0_9DINO (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UVR0_9DINO)

HSP 1 Score: 119 bits (297), Expect = 6.290e-32
Identity = 55/94 (58.51%), Postives = 68/94 (72.34%), Query Frame = 1
Query:   13 PLWTSSEGGDFISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHVTKYRNVEICLYTHSMGGVTRNDIIEAKLLDQ-LPVEYSPKWLKEHPEA 291
            PLW  ++G   + R F AKNF AAMAFLN   E+AE QGHHPD H+T YR V + + TH +GG+T ND I A++LD+   VEYSPKWLKEHP+A
Sbjct:   68 PLWRFADGPPRLIREFTAKNFKAAMAFLNAAGEIAEEQGHHPDFHLTNYREVSVVVSTHELGGLTENDFILAEVLDERTKVEYSPKWLKEHPQA 161          
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Match: A0A7S4PSP1_9DINO (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PSP1_9DINO)

HSP 1 Score: 119 bits (297), Expect = 8.280e-32
Identity = 55/94 (58.51%), Postives = 68/94 (72.34%), Query Frame = 1
Query:   13 PLWTSSEGGDFISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHVTKYRNVEICLYTHSMGGVTRNDIIEAKLLDQ-LPVEYSPKWLKEHPEA 291
            PLW  ++G   + R F AKNF AAMAFLN   E+AE QGHHPD H+T YR V + + TH +GG+T ND I A++LD+   VEYSPKWLKEHP+A
Sbjct:   78 PLWRFADGPPRLIREFTAKNFKAAMAFLNAAGEIAEEQGHHPDFHLTNYREVSVVVSTHELGGLTENDFILAEVLDERTKVEYSPKWLKEHPQA 171          
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Match: A0A7S2L402_9STRA (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L402_9STRA)

HSP 1 Score: 115 bits (289), Expect = 3.920e-31
Identity = 55/99 (55.56%), Postives = 73/99 (73.74%), Query Frame = 1
Query:    1 LAELPLWTSSEGGDF-ISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHVTKYRNVEICLYTHSMGGVTRNDIIEAKLLD-QLPVEYSPKWLKEHPEA 291
            L  LPLW   + G F ISR F AKNF AA+  +N+V  +AE +GHHPDLH+T YR+VEI L+TH +GGVT ND   A+++D ++ + YSPKWL+E+PEA
Sbjct:   35 LKNLPLWAQQQHGIFKISRKFTAKNFQAALDCINQVGVIAEREGHHPDLHLTSYRDVEIVLFTHKLGGVTLNDFAIARVIDLEVKISYSPKWLRENPEA 133          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10091.71.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ96_9PHAE1.140e-4472.554a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=... [more]
D7G856_ECTSI4.640e-4473.534a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=... [more]
K8Z8Y7_NANGC3.620e-3760.824a-hydroxytetrahydrobiopterin dehydratase n=2 Tax=... [more]
A0A6U3RQ02_9STRA4.920e-3561.224a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=... [more]
A0A6U0TCE5_9STRA5.120e-3458.954a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=... [more]
A0A7S1N220_9EUGL1.050e-3360.644a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=... [more]
A0A812W6D9_9DINO2.620e-3259.574a-hydroxytetrahydrobiopterin dehydratase (Fragmen... [more]
A0A7S4UVR0_9DINO6.290e-3258.514a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=... [more]
A0A7S4PSP1_9DINO8.280e-3258.514a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=... [more]
A0A7S2L402_9STRA3.920e-3155.564a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10091contigF-distichus_contig10091:5006..5558 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score154.8
Seed ortholog evalue2.1e-35
Seed eggNOG ortholog2880.D7G856
KEGG rclassRC01208
KEGG koko:K01724
KEGG ReactionR04734
KEGG Pathwayko00790,map00790
Hectar predicted targeting categoryother localisation
EggNOG free text desc.4-alpha-hydroxytetrahydrobiopterin dehydratase activity
EggNOG OGsCOG2154@1,KOG4073@2759
EC4.2.1.96
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Exons2
Model size306
Cds size306
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928926.4094567-CDS-F-distichus_contig10091:5005..51121622928926.4094567-CDS-F-distichus_contig10091:5005..5112Fucus distichus monoicousCDSF-distichus_contig10091 5006..5112 -
1690885067.5884178-CDS-F-distichus_contig10091:5005..51121690885067.5884178-CDS-F-distichus_contig10091:5005..5112Fucus distichus monoicousCDSF-distichus_contig10091 5006..5112 -
1622928926.4342048-CDS-F-distichus_contig10091:5359..55581622928926.4342048-CDS-F-distichus_contig10091:5359..5558Fucus distichus monoicousCDSF-distichus_contig10091 5360..5558 -
1690885067.6124918-CDS-F-distichus_contig10091:5359..55581690885067.6124918-CDS-F-distichus_contig10091:5359..5558Fucus distichus monoicousCDSF-distichus_contig10091 5360..5558 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10091.71.1prot_F-distichus_contig10091.71.1Fucus distichus monoicouspolypeptideF-distichus_contig10091 5006..5558 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10091.71.1

>prot_F-distichus_contig10091.71.1 ID=prot_F-distichus_contig10091.71.1|Name=mRNA_F-distichus_contig10091.71.1|organism=Fucus distichus monoicous|type=polypeptide|length=102bp
LAELPLWTSSEGGDFISRFFVAKNFVAAMAFLNRVAEVAEAQGHHPDLHV
TKYRNVEICLYTHSMGGVTRNDIIEAKLLDQLPVEYSPKWLKEHPEAAAV
P*
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mRNA from alignment at F-distichus_contig10091:5006..5558-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10091.71.1 ID=mRNA_F-distichus_contig10091.71.1|Name=mRNA_F-distichus_contig10091.71.1|organism=Fucus distichus monoicous|type=mRNA|length=553bp|location=Sequence derived from alignment at F-distichus_contig10091:5006..5558- (Fucus distichus monoicous)
CTAGCCGAGCTGCCATTGTGGACATCGTCCGAGGGTGGAGATTTCATCTC AAGATTCTTTGTCGCGAAGAATTTCGTCGCGGCAATGGCGTTCCTGAACC GTGTGGCGGAAGTCGCGGAGGCGCAGGGTCATCATCCCGATCTCCACGTC ACGAAATACCGCAACGTCGAGATATGCCTCTACACACACTCGATGGGAGG TACGAACAGCTCCGAGAGAGGGTTAACCGTGTGTTTGGGTTTGCCCTACA GACCAACGACGCTTCGCGAAGTCTTAGCGGCGGGCGGGCTGCTGGAAGTC GTGTGCCCCCACGGCCTCGAATTCTTTCAGTATCACCTTACTAAGGTTCT GATATATTTCCTTACTTCCTCGATAGGCACATGGTGATTTGACAAGGACA GAGAAAAGCACAAGTGTACCCACGTCGTGCTGGCTGCGCCCCGCAGGAGT GACCCGCAACGATATTATTGAGGCCAAGCTTTTGGACCAGCTTCCGGTGG AGTACTCACCAAAGTGGTTGAAGGAACACCCTGAGGCGGCTGCGGTGCCT TAA
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Coding sequence (CDS) from alignment at F-distichus_contig10091:5006..5558-

>mRNA_F-distichus_contig10091.71.1 ID=mRNA_F-distichus_contig10091.71.1|Name=mRNA_F-distichus_contig10091.71.1|organism=Fucus distichus monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at F-distichus_contig10091:5006..5558- (Fucus distichus monoicous)
CTAGCCGAGCTGCCATTGTGGACATCGTCCGAGGGTGGAGATTTCATCTC
AAGATTCTTTGTCGCGAAGAATTTCGTCGCGGCAATGGCGTTCCTGAACC
GTGTGGCGGAAGTCGCGGAGGCGCAGGGTCATCATCCCGATCTCCACGTC
ACGAAATACCGCAACGTCGAGATATGCCTCTACACACACTCGATGGGAGC
TAGCCGAGCTGCCATTGTGGACATCGTCCGAGGGTGGAGATTTCATCTCA
AGATTCTTTGTCGCGAAGAATTTCGTCGCGGCAATGGCGTTCCTGAACCG
TGTGGCGGAAGTCGCGGAGGCGCAGGGTCATCATCCCGATCTCCACGTCA
CGAAATACCGCAACGTCGAGATATGCCTCTACACACACTCGATGGGAGGA
GTGACCCGCAACGATATTATTGAGGCCAAGCTTTTGGACCAGCTTCCGGT
GGAGTACTCACCAAAGTGGTTGAAGGAACACCCTGAGGCGGCTGCGGTGC
CTTAAGAGTGACCCGCAACGATATTATTGAGGCCAAGCTTTTGGACCAGC
TTCCGGTGGAGTACTCACCAAAGTGGTTGAAGGAACACCCTGAGGCGGCT
GCGGTGCCTTAA
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