mRNA_F-distichus_contig10077.62.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10077.62.1
Unique NamemRNA_F-distichus_contig10077.62.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: D8LK00_ECTSI (DEK C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK00_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 7.640e-112
Identity = 283/485 (58.35%), Postives = 317/485 (65.36%), Query Frame = 1
Query:    1 QDLEGIVDTFSDDGGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEERGG-RGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGEGDGXXXXXXXXXXEVQLGEL--LAREQRARHMGLSQTAQDYLESSDSEGDXXXXXXXXXXAARGEAEDAERREEDRIQKLWVKKAKRRRVLAEVEQAGAGNSQSRSELFMQEDEDSQAILSLLHCTNSRLGVSGSVGGDVSVGGNDPADASANKVSGGSKRR------------TRDQYTGELDAQEVENGFGMGMSSKPLKRTKSDGTKPKGVDPSEAEARLNRAFTMPRFVASVAGYGSSTRAKQIQRKGSFLARSRSLHXXXXXXXXXXXXXXXSKFVFVSSAFGAD------DDTCARTGFEDSASRDSFSAGGGGR---RSGAPSSASEANS---NREKAGVLSEISVSGKRK-IEGAGGGPEMGRLWKGLCANGKPKSR 1371
            +DLEGIVDTFSDD GDK AQ+ +   E AAG+ + LK+MVRRVREGFGEERGG RGRG NARGNLRLDELT ADKS+R EAR LGLLNSDEEWS         XXXXXXXXXX         LAREQRARHMGLSQ+A + L SS+SEG XXXXXXXXXX          RREE R+QKLWVK+AKRRRVLAEVEQ+ AG      EL MQEDEDSQAILSLL CTNSRLG S S G                                      RD+Y+GELDA EV NGFGMGMSSK LKR KSDGT+P  V  +EA AR++RAFTMP+FV S AGY  S RAK++QR+GSFL+      XXXXXXXX       SKFVF+SS  GA       DD CARTGFE+ A+RD  +   GG     S  P SAS ANS    + +AG  S IS   K K +   GGG + GRLWKGLCA+GK K+R
Sbjct: 1438 EDLEGIVDTFSDDEGDKAAQDTYINDENAAGDRRELKEMVRRVREGFGEERGGGRGRGGNARGNLRLDELTRADKSTRGEARRLGLLNSDEEWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAREQRARHMGLSQSAVECLASSESEGXXXXXXXXXXXXXXXXXXXXXRREEARVQKLWVKRAKRRRVLAEVEQSAAGGDSQGPELLMQEDEDSQAILSLLQCTNSRLGFSASTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDEYSGELDANEVANGFGMGMSSKLLKRAKSDGTEPTDVTNAEARARMDRAFTMPQFVTSSAGYAGSARAKKVQRQGSFLSXXXXXXXXXXXXXXGKTTVSASKFVFMSSVSGAAAGGAAADDNCARTGFEEPAARDVGAGKEGGEGWSTSRPPFSASGANSAAGKKARAGAFSGISALKKGKGVGNPGGGGDKGRLWKGLCASGKQKAR 1922          
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A6H5KTL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL5_9PHAE)

HSP 1 Score: 366 bits (939), Expect = 1.440e-108
Identity = 276/485 (56.91%), Postives = 317/485 (65.36%), Query Frame = 1
Query:    1 QDLEGIVDTFSDDGGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEERGG-RGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGEGDGXXXXXXXXXXEVQLGEL--LAREQRARHMGLSQTAQDYLESSDSEGDXXXXXXXXXXAARGEAEDAERREEDRIQKLWVKKAKRRRVLAEVEQAGAGNSQSRSELFMQEDEDSQAILSLLHCTNSRLGVSGSVGGDVSVGGNDPADASANKVSGGSKR-----------RTRDQYTGELDAQEVENGFGMGMSSKPLKRTKSDGTKPKGVDPSEAEARLNRAFTMPRFVASVAGYGSSTRAKQIQRKGSFLARSRSLHXXXXXXXXXXXXXXXSKFVFVSSAFGAD------DDTCARTGFEDSASRDSFSAGGGGRR----SGAPSSASEANSNR-EKAGVLSEISVSGKRKIEGAG---GGPEMGRLWKGLCANGKPKSR 1371
            +DLEGIVDTFSDD GDK AQ+++  +E AAG+ + LK+MVRRVREGFG+ERGG RGRG NARGNLRLDELT ADKS+R EA  LGLLNSDEEWS         XXXXXXXXXX         L REQRARHMGLSQTA + LESS+S   XXXXXXXXXX         +RREE R+QKLWVK+AKRRRVLAEVEQ+ AG      E  MQEDEDSQAILSLL CTNSRLG S S G                                   R RD+Y+GELDA EV NGFGMGMSSK LKR KSDGT+P  V  +EA AR++RAFTMP+FV S AGY  S RAK+++R+GSFL+      XXXXXX         SKFVF+SS  GA       DD CARTGFE+ A+R+  +   GG      S  P SAS ANS   +KAG  +   +S  +K +GAG   GG + GRLWKGLCA+GK K+R
Sbjct: 1504 EDLEGIVDTFSDDEGDKAAQDSYINNENAAGDRRELKEMVRRVREGFGDERGGGRGRGGNARGNLRLDELTRADKSTRGEAARLGLLNSDEEWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVREQRARHMGLSQTAVECLESSESXXXXXXXXXXXXXXXXXXXXXXDRREEARVQKLWVKRAKRRRVLAEVEQSAAGGDSQGPEFLMQEDEDSQAILSLLQCTNSRLGFSASNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARDEYSGELDANEVANGFGMGMSSKNLKRAKSDGTEPTDVTNAEARARMDRAFTMPQFVTSSAGYAGSARAKKVRRQGSFLSXXXXXXXXXXXXASGKTTVSVSKFVFMSSVPGAAAAGAGADDNCARTGFEEPAAREVGAEKEGGEEGWSTSRPPFSASGANSAAGKKAGAGAFSGISALKKGKGAGNPGGGGDKGRLWKGLCASGKQKAR 1988          
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: W7U217_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U217_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.550e-16
Identity = 100/219 (45.66%), Postives = 130/219 (59.36%), Query Frame = 1
Query:    4 DLEGIVDTFSDDGGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEERGGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGEGDGXXXXXXXXXXEVQLGELLAREQRARHMG---LSQTAQDYLESSDSEGDXXXXXXXXXXAARGEAEDAERREEDRIQ-KLWVKKAKRRRVLAEVEQAGAGNSQSRSELFMQEDEDSQAI 648
            D EGIVD  S+  GD DA   F   +    + + L++++RRV+EGF   RGG   GA  RG LRLD+L  AD+ SR+EA+ LGLLNSDEE S +++G    XXXXXXXXXX   L E L R QR R MG   L  +AQ ++ S D +  XXXXXXXXXX              +R++ K WV+KAK RRVL E+E+          +  MQE +D ++I
Sbjct: 1353 DFEGIVDEVSEGEGDDDAFHDFAAQKEVEADKEQLQEVMRRVKEGFDGRRGGINFGA--RGRLRLDQLVGADRKSRREAKRLGLLNSDEELSSEDEGXXXXXXXXXXXXXX-XXLEEQLIRAQRERVMGMRALETSAQYFMSSDDEDEXXXXXXXXXXXXXXXXXXXXXXXXXERLRAKAWVRKAKMRRVLEEMEE----------QQLMQESQDGESI 1558          
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A836CNL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL9_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 8.760e-16
Identity = 90/173 (52.02%), Postives = 103/173 (59.54%), Query Frame = 1
Query:  163 GRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGEGDGXXXXXXXXXXEVQ-LGELLAREQRARHMGLSQTAQDYL-ESSDSEGDXXXXXXXXXXAARGEAEDAERREEDRIQKLWVKKAKRRRVLAEVEQAGAGNSQSRSELFMQEDEDSQAILSLLHCTNS 675
            G GA+ARG LRLD+LTAAD+SSR+EAR LGLLN DEEWSDDE G+  G     XXXXX  Q L ELL REQR RH+GLS+  Q  L ES      XXXXXXXXXX                             V+AEVE+    NSQ  S L +Q D++SQ +L LL CTNS
Sbjct:    3 GHGASARGALRLDQLTAADRSSRREARRLGLLNEDEEWSDDEGGKQGGQEEADXXXXXXXQQLAELLLREQRKRHLGLSERTQQVLYESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMAEVEEERR-NSQPSS-LGIQLDQESQDVLCLLQCTNS 173          
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A7R9ZSQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSQ0_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 9.280e-13
Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 1
Query:    4 DLEGIVDTFSDDGGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEERGG--RGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDE 288
            DLE IVD  SDD GD++A E   K  A   E +  K+++RR+REG+   RGG   G G  ARGNLR D+L AAD  +R++A+ LGLLN DE  SDD+
Sbjct:   18 DLEHIVDELSDDEGDEEAGEDARKKIARMEEKRRHKEILRRMREGYDGRRGGIAGGGGMGARGNLRFDQLVAAD--NREDAKRLGLLNDDELDSDDD 112          
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: D0NX70_PHYIT (MRC1 domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NX70_PHYIT)

HSP 1 Score: 69.7 bits (169), Expect = 7.670e-9
Identity = 91/242 (37.60%), Postives = 129/242 (53.31%), Query Frame = 1
Query:    4 DLEGIVDTFSDD--GGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEER---GGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGEGDGXXXXXXXXXXEVQLGELLAREQRARHMGLSQTAQDYLESSDSEGDXXXXXXXXXXAARG--EAEDAERREEDRIQKLWVKKAK-----------RRRVLAEVEQAGAG-NSQSRSELFMQEDEDSQAILSLLHCTN 672
            DL+ IVD  SDD    ++D  E  F+ E    + Q +K+++R V+EGFG  R    G   G+ ARG   LDEL AAD  S+ EA  LGLL SDEE S+DE GE   XXXXXXXXXX  Q+  +L    R R M   +    Y+ SS+S  D   XXX          E E  E RE  ++ KL+ ++A+           +R++  E  +A     + +   L ++EDEDSQ ++ +++ T+
Sbjct:  315 DLDHIVDDLSDDERAQEQDLDE-MFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSGARGRFNLDELVAAD-GSKFEAARLGLLESDEELSEDENGEXXXXXXXXXXXXXXAQMERML----RERFMNQPKI---YVTSSESGSDNEEXXXAKKDNGPDGDEVESDEERERQQM-KLFSERARINRRMQRMKDLQRQIALENNEADPNVKATAMPNLLLEEDEDSQELMHMMNRTD 546          
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A3M6VFB2_9STRA (MRC1 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFB2_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 5.690e-8
Identity = 89/247 (36.03%), Postives = 129/247 (52.23%), Query Frame = 1
Query:    4 DLEGIVDTFSDD--GGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEER---GGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGE-----GDGXXXXXXXXXXEVQLGELLAREQRARHMGLSQTAQDYLESSDSEGDXXXXXXXXXXAA-RGEAEDAERREEDRIQKLWVKKAK-----------RRRVLAEVEQA--GAGNSQSRSELFMQEDEDSQAILSLLHCTN 672
            DL+ IVD  SDD    ++D +E  F+ E    + Q +K+++R V+EGFG  R    G    + ARG   LDEL AAD  S+ EA  LGLL SDEE S+D+ G+     GD XXXXXXXXXX          E+  R   L+Q  + Y+ SS+S  D               E E  E RE  ++ KL+ ++A+           +R++  E  QA   A ++ +   L ++EDED+Q ++ LL+ T+
Sbjct:  377 DLDHIVDDLSDDERAQEQDLEE-MFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGISSTSGARGRFNLDELVAAD-GSKFEAARLGLLESDEELSEDDNGKRKKANGDSXXXXXXXXXXXXXXXXXXXMERLLRERFLTQP-KIYVTSSESGSDNEEEEVTKDNGLDANEVESDEERERQQM-KLFSERARINRRMQRMKDMQRQIALENNQADPSAKSNAAMPNLLLEEDEDTQELMHLLNRTD 619          
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A225VLY8_9STRA (MRC1 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLY8_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.200e-7
Identity = 85/248 (34.27%), Postives = 127/248 (51.21%), Query Frame = 1
Query:    4 DLEGIVDTFSDD--GGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEER---GGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGE----GDGXXXXXXXXXXEVQLGELLARE---QRARHMGLSQTAQDYLESSDSEGDXXXXXXXXXXAARGEAEDAERREEDRIQKLWVKKAKRRRVLAEV-------------EQAGAGNSQSRSELFMQEDEDSQAILSLLHCTN 672
            DL+ IVD  SDD     +D  E  F+ E    + Q +K+++R V+EGFG  R    G   G+ ARG   LDEL AAD  S+ EA  LGLL SDEE S+ E G+     DG XXXXXXXXX  ++  +L      Q   ++  S++  D  E +D++ D              E E  E RE  ++ KL+ ++A+  R +  +             E   A +S +   L ++EDEDSQ ++++++ T+
Sbjct:  274 DLDHIVDDISDDERAQQQDLDE-MFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSEARGRFNLDELVAAD-GSKFEAARLGLLESDEELSEGEDGKKKTNADGEXXXXXXXXXXXEMERMLRERFMNQPKIYVTSSESGSDDEEENDAKKDNGPDGD--------EIESDEERERQQM-KLFSERARINRRMQRMKDLQRQIALENNEEDPTAKSSAAMPNLLLEEDEDSQELMTMMNRTD 510          
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A329RLN9_9STRA (MRC1 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RLN9_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.700e-7
Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 1
Query:    4 DLEGIVDTFSDD--GGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEER---GGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGE 297
            DL+ IVD  SD+    ++D  E  F+ E    + Q +K+++R V+EGFG  R    G   G+ ARG   LDEL AAD  S+ EA  LGLL SDEE S+DE GE
Sbjct:  370 DLDHIVDDLSDEERAQEQDLDE-MFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSGARGRFNLDELVAAD-GSKFEAARLGLLESDEEISEDESGE 470          
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A8J5JCW2_9STRA (MRC1 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JCW2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.970e-7
Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 1
Query:    4 DLEGIVDTFSDD--GGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEER---GGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGE 297
            DL+ IVD  SD+    ++D  E  F+ E    + Q +K+++R V+EGFG  R    G   G+ ARG   LDEL AAD  S+ EA  LGLL SDEE S+DE GE
Sbjct:  373 DLDHIVDDLSDEERAQEQDLDE-MFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSGARGRFNLDELVAAD-GSKFEAARLGLLESDEEISEDESGE 473          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LK00_ECTSI7.640e-11258.35DEK C-terminal domain-containing protein n=1 Tax=E... [more]
A0A6H5KTL5_9PHAE1.440e-10856.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7U217_9STRA2.550e-1645.66Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A836CNL9_9STRA8.760e-1652.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9ZSQ0_9STRA9.280e-1351.55Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
D0NX70_PHYIT7.670e-937.60MRC1 domain-containing protein n=2 Tax=Phytophthor... [more]
A0A3M6VFB2_9STRA5.690e-836.03MRC1 domain-containing protein n=1 Tax=Peronospora... [more]
A0A225VLY8_9STRA1.200e-734.27MRC1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A329RLN9_9STRA1.700e-746.60MRC1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A8J5JCW2_9STRA1.970e-746.60MRC1 domain-containing protein n=1 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10077contigF-distichus_contig10077:14..3207 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.4
Seed ortholog evalue2.9e-91
Seed eggNOG ortholog2880.D8LK00
Hectar predicted targeting categoryother localisation
EggNOG OGs28NH7@1,2QV2P@2759
Ec32 ortholog descriptionDEK, C-terminal
Ec32 orthologEc-06_007630.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1582
Cds size1263
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928925.6888752-UTR-F-distichus_contig10077:13..1271622928925.6888752-UTR-F-distichus_contig10077:13..127Fucus distichus monoicousUTRF-distichus_contig10077 14..127 +
1690885066.5155241-UTR-F-distichus_contig10077:13..1271690885066.5155241-UTR-F-distichus_contig10077:13..127Fucus distichus monoicousUTRF-distichus_contig10077 14..127 +
1622928925.7951343-UTR-F-distichus_contig10077:2993..30561622928925.7951343-UTR-F-distichus_contig10077:2993..3056Fucus distichus monoicousUTRF-distichus_contig10077 2994..3056 +
1690885066.7746818-UTR-F-distichus_contig10077:2993..30561690885066.7746818-UTR-F-distichus_contig10077:2993..3056Fucus distichus monoicousUTRF-distichus_contig10077 2994..3056 +
1622928925.8107338-UTR-F-distichus_contig10077:3065..32071622928925.8107338-UTR-F-distichus_contig10077:3065..3207Fucus distichus monoicousUTRF-distichus_contig10077 3066..3207 +
1690885066.7839468-UTR-F-distichus_contig10077:3065..32071690885066.7839468-UTR-F-distichus_contig10077:3065..3207Fucus distichus monoicousUTRF-distichus_contig10077 3066..3207 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928925.702369-CDS-F-distichus_contig10077:127..2761622928925.702369-CDS-F-distichus_contig10077:127..276Fucus distichus monoicousCDSF-distichus_contig10077 128..276 +
1690885066.5923202-CDS-F-distichus_contig10077:127..2761690885066.5923202-CDS-F-distichus_contig10077:127..276Fucus distichus monoicousCDSF-distichus_contig10077 128..276 +
1622928925.7187865-CDS-F-distichus_contig10077:567..7031622928925.7187865-CDS-F-distichus_contig10077:567..703Fucus distichus monoicousCDSF-distichus_contig10077 568..703 +
1690885066.6650538-CDS-F-distichus_contig10077:567..7031690885066.6650538-CDS-F-distichus_contig10077:567..703Fucus distichus monoicousCDSF-distichus_contig10077 568..703 +
1622928925.73085-CDS-F-distichus_contig10077:1123..13511622928925.73085-CDS-F-distichus_contig10077:1123..1351Fucus distichus monoicousCDSF-distichus_contig10077 1124..1351 +
1690885066.6768117-CDS-F-distichus_contig10077:1123..13511690885066.6768117-CDS-F-distichus_contig10077:1123..1351Fucus distichus monoicousCDSF-distichus_contig10077 1124..1351 +
1622928925.7452219-CDS-F-distichus_contig10077:1602..18271622928925.7452219-CDS-F-distichus_contig10077:1602..1827Fucus distichus monoicousCDSF-distichus_contig10077 1603..1827 +
1690885066.7383785-CDS-F-distichus_contig10077:1602..18271690885066.7383785-CDS-F-distichus_contig10077:1602..1827Fucus distichus monoicousCDSF-distichus_contig10077 1603..1827 +
1622928925.7621527-CDS-F-distichus_contig10077:2165..23091622928925.7621527-CDS-F-distichus_contig10077:2165..2309Fucus distichus monoicousCDSF-distichus_contig10077 2166..2309 +
1690885066.7542958-CDS-F-distichus_contig10077:2165..23091690885066.7542958-CDS-F-distichus_contig10077:2165..2309Fucus distichus monoicousCDSF-distichus_contig10077 2166..2309 +
1622928925.7810624-CDS-F-distichus_contig10077:2612..29931622928925.7810624-CDS-F-distichus_contig10077:2612..2993Fucus distichus monoicousCDSF-distichus_contig10077 2613..2993 +
1690885066.7665591-CDS-F-distichus_contig10077:2612..29931690885066.7665591-CDS-F-distichus_contig10077:2612..2993Fucus distichus monoicousCDSF-distichus_contig10077 2613..2993 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10077.62.1prot_F-distichus_contig10077.62.1Fucus distichus monoicouspolypeptideF-distichus_contig10077 128..2993 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10077.62.1

>prot_F-distichus_contig10077.62.1 ID=prot_F-distichus_contig10077.62.1|Name=mRNA_F-distichus_contig10077.62.1|organism=Fucus distichus monoicous|type=polypeptide|length=421bp
MVRRVREGFGEERGGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNS
DEEWSDDEKGEGDGGEKDDLDELDEVQLGELLAREQRARHMGLSQTAQDY
LESSDSEGDEEGKGDGSGDAARGEAEDAERREEDRIQKLWVKKAKRRRVL
AEVEQAGAGNSQSRSELFMQEDEDSQAILSLLHCTNSRLGVSGSVGGDVS
VGGNDPADASANKVSGGSKRRTRDQYTGELDAQEVENGFGMGMSSKPLKR
TKSDGTKPKGVDPSEAEARLNRAFTMPRFVASVAGYGSSTRAKQIQRKGS
FLARSRSLHARSGSLAAGKTTVSASKFVFVSSAFGADDDTCARTGFEDSA
SRDSFSAGGGGRRSGAPSSASEANSNREKAGVLSEISVSGKRKIEGAGGG
PEMGRLWKGLCANGKPKSRG*
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mRNA from alignment at F-distichus_contig10077:14..3207+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10077.62.1 ID=mRNA_F-distichus_contig10077.62.1|Name=mRNA_F-distichus_contig10077.62.1|organism=Fucus distichus monoicous|type=mRNA|length=3194bp|location=Sequence derived from alignment at F-distichus_contig10077:14..3207+ (Fucus distichus monoicous)
CAGGATCTGGAGGGCATCGTGGATACCTTCTCCGACGACGGGGGAGACAA GGACGCTCAGGAAGCCTTCTTCAAAAGCGAAGCGGCCGCCGGCGAGCACC AGGCGCTCAAGGACATGGTCCGGCGTGTGCGCGAGGGTTTCGGGGAAGAG CGCGGAGGTCGTGGCCGTGGTGCCAACGCCCGGGGAAACCTACGGCTAGA TGAGCTGACCGCTGCGGACAAGAGTAGCCGAAAGGAGGCAAGGCTCCTTG GGCTGCTCAATAGGTGCGCGTCTCCTCTTCCCAAACATGTGTACGTGTGT CTGGAGGGGATCAATCCTCGGCGAGATTCCAGTTCGAAAACCTGCGGGGT TTTTGTCGCGATATGTGTCTGGTATGGTGGTCTTTCCTGCTTATTGGCTC GTGGTACGCTTTTATTGAGTGACGACCCTTGATGCGGAAGCGCGCATCGA GGGTTACTTTGGTTCGGAATGGGTTCACGCTTGCGCCACTTGGTGCGTTG CGGACGAATCCATTTTCGTCTGCTGCTGTGAATCTGATGTTGCTACGTTG GCAGCGATGAAGAGTGGAGCGACGACGAAAAGGGTGAAGGCGACGGTGGC GAGAAAGACGACCTCGATGAGCTCGACGAGGTGCAACTGGGCGAGCTTCT GGCGAGGGAGCAGCGCGCGAGGCACATGGGGCTCAGTCAGGTGTGTTTCT GTATCGGTGGGCTTGTTTGCCTGACAGCCAAGGGGGGTTTTGTGCTCTTT GGCCCTATTCGAGGTCATTCGGGTGCACAGGTGTGTCGAGATGAGGGTTT CGTCCGTCAGCAGGTTATTGATACGACACTAGACATGTACGAGGTAAATA TATACTGTATTCCATAAGTGCATCCAGCTACTAATAGGCTATTAGTAGGC GCCGCTGTGCCATGAATCATGAGCCAAGCTATTTTTCGTGGTGACGGCCA GAGCCATACGTGGTTGTTCCTTCGCGCCTTGCCATTCTTCTGGAAGCCGG CCTCCCAAAAATCTGCACCTTAATACAATACTAGTAAAAAATACGTCTGA AGTCCGCCCGCTCTCATGTCAAGAGGCCTCGCTCTTTTCTCTTCGTGTGC GCCGCGGCAGACCGCCCAAGATTACCTGGAATCCTCCGACAGCGAAGGAG ATGAGGAGGGTAAAGGCGACGGCTCGGGCGACGCCGCGAGGGGCGAGGCG GAAGACGCCGAACGGAGGGAGGAAGACAGGATCCAGAAGCTGTGGGTCAA AAAAGCCAAGCGGCGGCGCGTCCTCGCGGAGGTGGAACAGGCCGGGGCGG GGAACAGCCAGTCTCGATCAGAGCTGTTCATGCAAGAGGTGAAAGCAAAA GCGACCACATGATCCCCCCTCCCACCCCTCCGACTATACTCTGCGCTGCT TTCATGTTTTTTTGTACATGATTATTTTATCTCTTTTTGTACTGTTGCAG TGCAAAGGGAGATGTAGTTTTGTGAGGTAGCGGACTGACGTCGGTCGCCC ATGTAGGCCTCGTGTGGTGTCCATCGTCCCCTCTCGGCATACAACGCCAA TCCCGTACTGTTTTCTCGTTGGAATGGCTGTCCAATCAGGACGAAGACTC TCAGGCCATTCTCAGCCTGCTGCACTGCACCAACAGTCGGCTGGGTGTTT CTGGTTCTGTGGGCGGAGACGTTTCTGTCGGTGGGAACGACCCGGCGGAT GCCTCGGCCAACAAAGTCTCTGGTGGAAGCAAGAGGCGCACGCGCGACCA GTACACGGGAGAGCTCGACGCGCAGGAGGTTGAAAATGGCTTTGGAATGG GCATGTCTTCGAAGGTGCAGACCGCGCAATACCGATGCTTGCTGTAGATT GTAGATGTCAAAGGGCGGGGGCGGTGATTGCTTGGGATGAACACGGGGTC ATTTTTGAGTGTTGTGTGTGAAGGCAAGGACATCGTTGCTGACGGAGGGC AAAAGAGAGATTTGTATTGTACCAAGTAGAGCACAAGCCAGGGATGAATG GTGTGCGGTACCAAGATTTCGTCGTTTGCCCTTGCCAAATAGTCTAATGG TTTGTCGTACTATTAATAATGGATAATGTATCACGTATACTTTACACTTC CTTAACGCATAACGTTATTTTGATTCCGCTCCTGCTAATGCTTCCCTTCC AGCCTTTGAAACGGACGAAGAGCGATGGCACAAAGCCCAAGGGCGTAGAT CCTTCGGAAGCCGAGGCTAGGCTGAACCGAGCCTTCACCATGCCCCGGTT CGTCGCCTCTGTTGCCGGCTACGGCAGCTCCACACGCGCCAAGCAGGTGG GTGGGTTCGGCAGCAGCGAGACGACAAACCACTGTCGAGTTTTCGCATGT CGACGTGTGGCCGATGTAAAATGATGTGCATTTCCCGCTCCGCTCCATCC AGATGGCGTATGACACCGTGCCCCTTTTTTATGTCTCACGTTTAGTGTAC GTCTCTGGCTGCACTGAGGAAAAATAATATATAAACCTCTGTTAATATAA TAGTACAAAGTAGAAGAAATGAACTCTTACTAACTGATTGCCCCTGTTTT CTTCCTTGCATCCCAACCGCTGACGATTCCTGCGCTCGACGGAAAACAGA TCCAGCGCAAGGGTTCGTTTCTCGCGCGTTCGCGCAGCCTGCACGCCCGC TCGGGGTCCCTCGCCGCGGGCAAGACCACCGTTTCCGCCTCCAAGTTCGT GTTTGTGTCTAGCGCTTTCGGCGCTGACGATGATACCTGCGCACGCACCG GCTTCGAAGATTCAGCCTCGAGAGATTCTTTTTCGGCTGGAGGAGGCGGC CGCCGAAGCGGTGCTCCTTCGTCCGCGTCGGAGGCAAACTCAAACAGGGA AAAGGCGGGGGTGTTGAGTGAAATCAGCGTGAGCGGGAAGAGGAAGATAG AGGGGGCAGGGGGCGGGCCAGAGATGGGCAGACTGTGGAAGGGTCTTTGC GCCAACGGCAAGCCGAAATCGAGGGGGTGATTCTTCTCCCACTCGCTCAG CGGTTCAGCCGGTCATTTGAGAATGCTTTCGGGGCTCGATATGGCTCGAT AGTAATGGTCCAAGTAGGAAATGTAGAATTGTCATGTATCGGGGAAGTAG TGGTTGAAAAGGGCTGCAGGTGGTCAGCAATGTAAGTTAAGATGTGCCAC GGGCTTTGTCGGCTCAGTCCCAAAACGATGGGTTCACGCATTTA
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Coding sequence (CDS) from alignment at F-distichus_contig10077:14..3207+

>mRNA_F-distichus_contig10077.62.1 ID=mRNA_F-distichus_contig10077.62.1|Name=mRNA_F-distichus_contig10077.62.1|organism=Fucus distichus monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at F-distichus_contig10077:14..3207+ (Fucus distichus monoicous)
ATGGTCCGGCGTGTGCGCGAGGGTTTCGGGGAAGAGCGCGGAGGTCGTGG
CCGTGGTGCCAACGCCCGGGGAAACCTACGGCTAGATGAGCTGACCGCTG
CGGACAAGAGTAGCCGAAAGGAGGCAAGGCTCCTTGGGCTGCTCAATAGA
TGGTCCGGCGTGTGCGCGAGGGTTTCGGGGAAGAGCGCGGAGGTCGTGGC
CGTGGTGCCAACGCCCGGGGAAACCTACGGCTAGATGAGCTGACCGCTGC
GGACAAGAGTAGCCGAAAGGAGGCAAGGCTCCTTGGGCTGCTCAATAGCG
ATGAAGAGTGGAGCGACGACGAAAAGGGTGAAGGCGACGGTGGCGAGAAA
GACGACCTCGATGAGCTCGACGAGGTGCAACTGGGCGAGCTTCTGGCGAG
GGAGCAGCGCGCGAGGCACATGGGGCTCAGTCAGCGATGAAGAGTGGAGC
GACGACGAAAAGGGTGAAGGCGACGGTGGCGAGAAAGACGACCTCGATGA
GCTCGACGAGGTGCAACTGGGCGAGCTTCTGGCGAGGGAGCAGCGCGCGA
GGCACATGGGGCTCAGTCAGACCGCCCAAGATTACCTGGAATCCTCCGAC
AGCGAAGGAGATGAGGAGGGTAAAGGCGACGGCTCGGGCGACGCCGCGAG
GGGCGAGGCGGAAGACGCCGAACGGAGGGAGGAAGACAGGATCCAGAAGC
TGTGGGTCAAAAAAGCCAAGCGGCGGCGCGTCCTCGCGGAGGTGGAACAG
GCCGGGGCGGGGAACAGCCAGTCTCGATCAGAGCTGTTCATGCAAGAGAC
CGCCCAAGATTACCTGGAATCCTCCGACAGCGAAGGAGATGAGGAGGGTA
AAGGCGACGGCTCGGGCGACGCCGCGAGGGGCGAGGCGGAAGACGCCGAA
CGGAGGGAGGAAGACAGGATCCAGAAGCTGTGGGTCAAAAAAGCCAAGCG
GCGGCGCGTCCTCGCGGAGGTGGAACAGGCCGGGGCGGGGAACAGCCAGT
CTCGATCAGAGCTGTTCATGCAAGAGGACGAAGACTCTCAGGCCATTCTC
AGCCTGCTGCACTGCACCAACAGTCGGCTGGGTGTTTCTGGTTCTGTGGG
CGGAGACGTTTCTGTCGGTGGGAACGACCCGGCGGATGCCTCGGCCAACA
AAGTCTCTGGTGGAAGCAAGAGGCGCACGCGCGACCAGTACACGGGAGAG
CTCGACGCGCAGGAGGTTGAAAATGGCTTTGGAATGGGCATGTCTTCGAA
GGACGAAGACTCTCAGGCCATTCTCAGCCTGCTGCACTGCACCAACAGTC
GGCTGGGTGTTTCTGGTTCTGTGGGCGGAGACGTTTCTGTCGGTGGGAAC
GACCCGGCGGATGCCTCGGCCAACAAAGTCTCTGGTGGAAGCAAGAGGCG
CACGCGCGACCAGTACACGGGAGAGCTCGACGCGCAGGAGGTTGAAAATG
GCTTTGGAATGGGCATGTCTTCGAAGCCTTTGAAACGGACGAAGAGCGAT
GGCACAAAGCCCAAGGGCGTAGATCCTTCGGAAGCCGAGGCTAGGCTGAA
CCGAGCCTTCACCATGCCCCGGTTCGTCGCCTCTGTTGCCGGCTACGGCA
GCTCCACACGCGCCAAGCAGCCTTTGAAACGGACGAAGAGCGATGGCACA
AAGCCCAAGGGCGTAGATCCTTCGGAAGCCGAGGCTAGGCTGAACCGAGC
CTTCACCATGCCCCGGTTCGTCGCCTCTGTTGCCGGCTACGGCAGCTCCA
CACGCGCCAAGCAGATCCAGCGCAAGGGTTCGTTTCTCGCGCGTTCGCGC
AGCCTGCACGCCCGCTCGGGGTCCCTCGCCGCGGGCAAGACCACCGTTTC
CGCCTCCAAGTTCGTGTTTGTGTCTAGCGCTTTCGGCGCTGACGATGATA
CCTGCGCACGCACCGGCTTCGAAGATTCAGCCTCGAGAGATTCTTTTTCG
GCTGGAGGAGGCGGCCGCCGAAGCGGTGCTCCTTCGTCCGCGTCGGAGGC
AAACTCAAACAGGGAAAAGGCGGGGGTGTTGAGTGAAATCAGCGTGAGCG
GGAAGAGGAAGATAGAGGGGGCAGGGGGCGGGCCAGAGATGGGCAGACTG
TGGAAGGGTCTTTGCGCCAACGGCAAGCCGAAATCGAGGGGGTGAATCCA
GCGCAAGGGTTCGTTTCTCGCGCGTTCGCGCAGCCTGCACGCCCGCTCGG
GGTCCCTCGCCGCGGGCAAGACCACCGTTTCCGCCTCCAAGTTCGTGTTT
GTGTCTAGCGCTTTCGGCGCTGACGATGATACCTGCGCACGCACCGGCTT
CGAAGATTCAGCCTCGAGAGATTCTTTTTCGGCTGGAGGAGGCGGCCGCC
GAAGCGGTGCTCCTTCGTCCGCGTCGGAGGCAAACTCAAACAGGGAAAAG
GCGGGGGTGTTGAGTGAAATCAGCGTGAGCGGGAAGAGGAAGATAGAGGG
GGCAGGGGGCGGGCCAGAGATGGGCAGACTGTGGAAGGGTCTTTGCGCCA
ACGGCAAGCCGAAATCGAGGGGGTGA
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