mRNA_F-distichus_contig10077.62.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: D8LK00_ECTSI (DEK C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK00_ECTSI) HSP 1 Score: 375 bits (963), Expect = 7.640e-112 Identity = 283/485 (58.35%), Postives = 317/485 (65.36%), Query Frame = 1
Query: 1 QDLEGIVDTFSDDGGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEERGG-RGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGEGDGXXXXXXXXXXEVQLGEL--LAREQRARHMGLSQTAQDYLESSDSEGDXXXXXXXXXXAARGEAEDAERREEDRIQKLWVKKAKRRRVLAEVEQAGAGNSQSRSELFMQEDEDSQAILSLLHCTNSRLGVSGSVGGDVSVGGNDPADASANKVSGGSKRR------------TRDQYTGELDAQEVENGFGMGMSSKPLKRTKSDGTKPKGVDPSEAEARLNRAFTMPRFVASVAGYGSSTRAKQIQRKGSFLARSRSLHXXXXXXXXXXXXXXXSKFVFVSSAFGAD------DDTCARTGFEDSASRDSFSAGGGGR---RSGAPSSASEANS---NREKAGVLSEISVSGKRK-IEGAGGGPEMGRLWKGLCANGKPKSR 1371
+DLEGIVDTFSDD GDK AQ+ + E AAG+ + LK+MVRRVREGFGEERGG RGRG NARGNLRLDELT ADKS+R EAR LGLLNSDEEWS XXXXXXXXXX LAREQRARHMGLSQ+A + L SS+SEG XXXXXXXXXX RREE R+QKLWVK+AKRRRVLAEVEQ+ AG EL MQEDEDSQAILSLL CTNSRLG S S G RD+Y+GELDA EV NGFGMGMSSK LKR KSDGT+P V +EA AR++RAFTMP+FV S AGY S RAK++QR+GSFL+ XXXXXXXX SKFVF+SS GA DD CARTGFE+ A+RD + GG S P SAS ANS + +AG S IS K K + GGG + GRLWKGLCA+GK K+R
Sbjct: 1438 EDLEGIVDTFSDDEGDKAAQDTYINDENAAGDRRELKEMVRRVREGFGEERGGGRGRGGNARGNLRLDELTRADKSTRGEARRLGLLNSDEEWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAREQRARHMGLSQSAVECLASSESEGXXXXXXXXXXXXXXXXXXXXXRREEARVQKLWVKRAKRRRVLAEVEQSAAGGDSQGPELLMQEDEDSQAILSLLQCTNSRLGFSASTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDEYSGELDANEVANGFGMGMSSKLLKRAKSDGTEPTDVTNAEARARMDRAFTMPQFVTSSAGYAGSARAKKVQRQGSFLSXXXXXXXXXXXXXXGKTTVSASKFVFMSSVSGAAAGGAAADDNCARTGFEEPAARDVGAGKEGGEGWSTSRPPFSASGANSAAGKKARAGAFSGISALKKGKGVGNPGGGGDKGRLWKGLCASGKQKAR 1922
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A6H5KTL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL5_9PHAE) HSP 1 Score: 366 bits (939), Expect = 1.440e-108 Identity = 276/485 (56.91%), Postives = 317/485 (65.36%), Query Frame = 1
Query: 1 QDLEGIVDTFSDDGGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEERGG-RGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGEGDGXXXXXXXXXXEVQLGEL--LAREQRARHMGLSQTAQDYLESSDSEGDXXXXXXXXXXAARGEAEDAERREEDRIQKLWVKKAKRRRVLAEVEQAGAGNSQSRSELFMQEDEDSQAILSLLHCTNSRLGVSGSVGGDVSVGGNDPADASANKVSGGSKR-----------RTRDQYTGELDAQEVENGFGMGMSSKPLKRTKSDGTKPKGVDPSEAEARLNRAFTMPRFVASVAGYGSSTRAKQIQRKGSFLARSRSLHXXXXXXXXXXXXXXXSKFVFVSSAFGAD------DDTCARTGFEDSASRDSFSAGGGGRR----SGAPSSASEANSNR-EKAGVLSEISVSGKRKIEGAG---GGPEMGRLWKGLCANGKPKSR 1371
+DLEGIVDTFSDD GDK AQ+++ +E AAG+ + LK+MVRRVREGFG+ERGG RGRG NARGNLRLDELT ADKS+R EA LGLLNSDEEWS XXXXXXXXXX L REQRARHMGLSQTA + LESS+S XXXXXXXXXX +RREE R+QKLWVK+AKRRRVLAEVEQ+ AG E MQEDEDSQAILSLL CTNSRLG S S G R RD+Y+GELDA EV NGFGMGMSSK LKR KSDGT+P V +EA AR++RAFTMP+FV S AGY S RAK+++R+GSFL+ XXXXXX SKFVF+SS GA DD CARTGFE+ A+R+ + GG S P SAS ANS +KAG + +S +K +GAG GG + GRLWKGLCA+GK K+R
Sbjct: 1504 EDLEGIVDTFSDDEGDKAAQDSYINNENAAGDRRELKEMVRRVREGFGDERGGGRGRGGNARGNLRLDELTRADKSTRGEAARLGLLNSDEEWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVREQRARHMGLSQTAVECLESSESXXXXXXXXXXXXXXXXXXXXXXDRREEARVQKLWVKRAKRRRVLAEVEQSAAGGDSQGPEFLMQEDEDSQAILSLLQCTNSRLGFSASNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARDEYSGELDANEVANGFGMGMSSKNLKRAKSDGTEPTDVTNAEARARMDRAFTMPQFVTSSAGYAGSARAKKVRRQGSFLSXXXXXXXXXXXXASGKTTVSVSKFVFMSSVPGAAAAGAGADDNCARTGFEEPAAREVGAEKEGGEEGWSTSRPPFSASGANSAAGKKAGAGAFSGISALKKGKGAGNPGGGGDKGRLWKGLCASGKQKAR 1988
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: W7U217_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U217_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.550e-16 Identity = 100/219 (45.66%), Postives = 130/219 (59.36%), Query Frame = 1
Query: 4 DLEGIVDTFSDDGGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEERGGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGEGDGXXXXXXXXXXEVQLGELLAREQRARHMG---LSQTAQDYLESSDSEGDXXXXXXXXXXAARGEAEDAERREEDRIQ-KLWVKKAKRRRVLAEVEQAGAGNSQSRSELFMQEDEDSQAI 648
D EGIVD S+ GD DA F + + + L++++RRV+EGF RGG GA RG LRLD+L AD+ SR+EA+ LGLLNSDEE S +++G XXXXXXXXXX L E L R QR R MG L +AQ ++ S D + XXXXXXXXXX +R++ K WV+KAK RRVL E+E+ + MQE +D ++I
Sbjct: 1353 DFEGIVDEVSEGEGDDDAFHDFAAQKEVEADKEQLQEVMRRVKEGFDGRRGGINFGA--RGRLRLDQLVGADRKSRREAKRLGLLNSDEELSSEDEGXXXXXXXXXXXXXX-XXLEEQLIRAQRERVMGMRALETSAQYFMSSDDEDEXXXXXXXXXXXXXXXXXXXXXXXXXERLRAKAWVRKAKMRRVLEEMEE----------QQLMQESQDGESI 1558
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A836CNL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL9_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 8.760e-16 Identity = 90/173 (52.02%), Postives = 103/173 (59.54%), Query Frame = 1
Query: 163 GRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGEGDGXXXXXXXXXXEVQ-LGELLAREQRARHMGLSQTAQDYL-ESSDSEGDXXXXXXXXXXAARGEAEDAERREEDRIQKLWVKKAKRRRVLAEVEQAGAGNSQSRSELFMQEDEDSQAILSLLHCTNS 675
G GA+ARG LRLD+LTAAD+SSR+EAR LGLLN DEEWSDDE G+ G XXXXX Q L ELL REQR RH+GLS+ Q L ES XXXXXXXXXX V+AEVE+ NSQ S L +Q D++SQ +L LL CTNS
Sbjct: 3 GHGASARGALRLDQLTAADRSSRREARRLGLLNEDEEWSDDEGGKQGGQEEADXXXXXXXQQLAELLLREQRKRHLGLSERTQQVLYESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMAEVEEERR-NSQPSS-LGIQLDQESQDVLCLLQCTNS 173
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A7R9ZSQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSQ0_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 9.280e-13 Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 4 DLEGIVDTFSDDGGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEERGG--RGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDE 288
DLE IVD SDD GD++A E K A E + K+++RR+REG+ RGG G G ARGNLR D+L AAD +R++A+ LGLLN DE SDD+
Sbjct: 18 DLEHIVDELSDDEGDEEAGEDARKKIARMEEKRRHKEILRRMREGYDGRRGGIAGGGGMGARGNLRFDQLVAAD--NREDAKRLGLLNDDELDSDDD 112
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: D0NX70_PHYIT (MRC1 domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NX70_PHYIT) HSP 1 Score: 69.7 bits (169), Expect = 7.670e-9 Identity = 91/242 (37.60%), Postives = 129/242 (53.31%), Query Frame = 1
Query: 4 DLEGIVDTFSDD--GGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEER---GGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGEGDGXXXXXXXXXXEVQLGELLAREQRARHMGLSQTAQDYLESSDSEGDXXXXXXXXXXAARG--EAEDAERREEDRIQKLWVKKAK-----------RRRVLAEVEQAGAG-NSQSRSELFMQEDEDSQAILSLLHCTN 672
DL+ IVD SDD ++D E F+ E + Q +K+++R V+EGFG R G G+ ARG LDEL AAD S+ EA LGLL SDEE S+DE GE XXXXXXXXXX Q+ +L R R M + Y+ SS+S D XXX E E E RE ++ KL+ ++A+ +R++ E +A + + L ++EDEDSQ ++ +++ T+
Sbjct: 315 DLDHIVDDLSDDERAQEQDLDE-MFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSGARGRFNLDELVAAD-GSKFEAARLGLLESDEELSEDENGEXXXXXXXXXXXXXXAQMERML----RERFMNQPKI---YVTSSESGSDNEEXXXAKKDNGPDGDEVESDEERERQQM-KLFSERARINRRMQRMKDLQRQIALENNEADPNVKATAMPNLLLEEDEDSQELMHMMNRTD 546
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A3M6VFB2_9STRA (MRC1 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFB2_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 5.690e-8 Identity = 89/247 (36.03%), Postives = 129/247 (52.23%), Query Frame = 1
Query: 4 DLEGIVDTFSDD--GGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEER---GGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGE-----GDGXXXXXXXXXXEVQLGELLAREQRARHMGLSQTAQDYLESSDSEGDXXXXXXXXXXAA-RGEAEDAERREEDRIQKLWVKKAK-----------RRRVLAEVEQA--GAGNSQSRSELFMQEDEDSQAILSLLHCTN 672
DL+ IVD SDD ++D +E F+ E + Q +K+++R V+EGFG R G + ARG LDEL AAD S+ EA LGLL SDEE S+D+ G+ GD XXXXXXXXXX E+ R L+Q + Y+ SS+S D E E E RE ++ KL+ ++A+ +R++ E QA A ++ + L ++EDED+Q ++ LL+ T+
Sbjct: 377 DLDHIVDDLSDDERAQEQDLEE-MFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGISSTSGARGRFNLDELVAAD-GSKFEAARLGLLESDEELSEDDNGKRKKANGDSXXXXXXXXXXXXXXXXXXXMERLLRERFLTQP-KIYVTSSESGSDNEEEEVTKDNGLDANEVESDEERERQQM-KLFSERARINRRMQRMKDMQRQIALENNQADPSAKSNAAMPNLLLEEDEDTQELMHLLNRTD 619
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A225VLY8_9STRA (MRC1 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLY8_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.200e-7 Identity = 85/248 (34.27%), Postives = 127/248 (51.21%), Query Frame = 1
Query: 4 DLEGIVDTFSDD--GGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEER---GGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGE----GDGXXXXXXXXXXEVQLGELLARE---QRARHMGLSQTAQDYLESSDSEGDXXXXXXXXXXAARGEAEDAERREEDRIQKLWVKKAKRRRVLAEV-------------EQAGAGNSQSRSELFMQEDEDSQAILSLLHCTN 672
DL+ IVD SDD +D E F+ E + Q +K+++R V+EGFG R G G+ ARG LDEL AAD S+ EA LGLL SDEE S+ E G+ DG XXXXXXXXX ++ +L Q ++ S++ D E +D++ D E E E RE ++ KL+ ++A+ R + + E A +S + L ++EDEDSQ ++++++ T+
Sbjct: 274 DLDHIVDDISDDERAQQQDLDE-MFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSEARGRFNLDELVAAD-GSKFEAARLGLLESDEELSEGEDGKKKTNADGEXXXXXXXXXXXEMERMLRERFMNQPKIYVTSSESGSDDEEENDAKKDNGPDGD--------EIESDEERERQQM-KLFSERARINRRMQRMKDLQRQIALENNEEDPTAKSSAAMPNLLLEEDEDSQELMTMMNRTD 510
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A329RLN9_9STRA (MRC1 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RLN9_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.700e-7 Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 1
Query: 4 DLEGIVDTFSDD--GGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEER---GGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGE 297
DL+ IVD SD+ ++D E F+ E + Q +K+++R V+EGFG R G G+ ARG LDEL AAD S+ EA LGLL SDEE S+DE GE
Sbjct: 370 DLDHIVDDLSDEERAQEQDLDE-MFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSGARGRFNLDELVAAD-GSKFEAARLGLLESDEEISEDESGE 470
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Match: A0A8J5JCW2_9STRA (MRC1 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JCW2_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.970e-7 Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 1
Query: 4 DLEGIVDTFSDD--GGDKDAQEAFFKSEAAAGEHQALKDMVRRVREGFGEER---GGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSDEEWSDDEKGE 297
DL+ IVD SD+ ++D E F+ E + Q +K+++R V+EGFG R G G+ ARG LDEL AAD S+ EA LGLL SDEE S+DE GE
Sbjct: 373 DLDHIVDDLSDEERAQEQDLDE-MFRREQEDQDRQQVKEVMRNVKEGFGRNRRAFSGLHSGSGARGRFNLDELVAAD-GSKFEAARLGLLESDEEISEDESGE 473 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10077.62.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10077.62.1 >prot_F-distichus_contig10077.62.1 ID=prot_F-distichus_contig10077.62.1|Name=mRNA_F-distichus_contig10077.62.1|organism=Fucus distichus monoicous|type=polypeptide|length=421bp MVRRVREGFGEERGGRGRGANARGNLRLDELTAADKSSRKEARLLGLLNSback to top mRNA from alignment at F-distichus_contig10077:14..3207+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10077.62.1 ID=mRNA_F-distichus_contig10077.62.1|Name=mRNA_F-distichus_contig10077.62.1|organism=Fucus distichus monoicous|type=mRNA|length=3194bp|location=Sequence derived from alignment at F-distichus_contig10077:14..3207+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10077:14..3207+ >mRNA_F-distichus_contig10077.62.1 ID=mRNA_F-distichus_contig10077.62.1|Name=mRNA_F-distichus_contig10077.62.1|organism=Fucus distichus monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at F-distichus_contig10077:14..3207+ (Fucus distichus monoicous)back to top |