mRNA_F-distichus_contig100491.47.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig100491.47.1
Unique NamemRNA_F-distichus_contig100491.47.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Match: A0A1B6JLD2_9HEMI (Exonuclease domain-containing protein n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6JLD2_9HEMI)

HSP 1 Score: 163 bits (413), Expect = 4.850e-44
Identity = 120/350 (34.29%), Postives = 173/350 (49.43%), Query Frame = 1
Query:   10 IEMKTLVYFDIEATGLKSSGRPRISEISFVAINTQEILNLNHKLLEKLNDTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQSRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGSDIFCVDSYVGLKEIFKNSMNKPLAVVA--KPAERENLEEKTVEKEMQSVKILLETGEFDKEMDAVEEKSIALRQDLPNEQSIRIDHS---NMLIGKKENEQTPLKNGIPLSSIVQINKRKQWQSTEVFKSKKKLKFSECEYPKSFSLINLHKQLLGYLPTISHGAEADCLALLRITAVIGDKWLVWVKNNSSPFSETKSMW 1044
            +E KT V+FD+E TGL+S  R  I+EIS VA +   I++ ++ + +        E+I+  E FLPRVLNK+ L VYP   I P  S++TGL N NL  Q  FD+    L+  F+ RL  P+CLVAHNGN +DFP+LQ+EL+K   E   D++CVDS  G +E+   S N+    +   KP    N    T+       K      E+D+E+D V E +    Q+  +  S ++D      M   +  NE TP           Q   RK      +     + K    + P++F L ++++         SH AEAD LALL     +G   L W+ +   PF   K  W
Sbjct:    1 METKTFVFFDLETTGLESGTR--ITEISLVAASRDHIIDKHNGVTK--------ENIIG-EDFLPRVLNKVNLTVYPCRMIHPIASEITGLTNENLEVQRPFDENLFKLIVYFMERLEKPICLVAHNGNKFDFPILQSELLKINKEFSDDLYCVDSLPGFREVLTRSHNREENAICGIKPLNDTN----TMTAATLVPKCDWSCEEYDQELDQVTELAEKFTQEDKSLDSDKLDRKIQMEMQRIRAINENTP-----------QRKSRKSATCQPINLPNVRRKILNDQQPRNFELKSIYESTTKRECLNSHRAEADALALLECVTAVGRPILEWMDSKRIPFKSIKKRW 324          
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Match: A0A1B6FXI8_9HEMI (Exonuclease domain-containing protein n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6FXI8_9HEMI)

HSP 1 Score: 157 bits (397), Expect = 1.200e-41
Identity = 113/355 (31.83%), Postives = 176/355 (49.58%), Query Frame = 1
Query:   10 IEMKTLVYFDIEATGLKS-SGRPRISEISFVAINTQEILNLNHKLLEKLNDTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQSRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGSDIFCVDSYVGLKEIFKNSMNKPLAVVA--KPAERENLEEKTVEKEMQSVKILLETG----EFDKEMDAVEEKSIALRQDLPNEQSIRIDH---SNMLIGKKENEQTPLKNGIPLSSIVQINKRKQWQSTEVFKSKKKLKFSECEYPKSFSLINLHKQLLGYLPTISHGAEADCLALLRITAVIGDKWLVWVKNNSSPFSETKSMW 1044
            +E KT V+FD+E TGL       RI+EIS VA +  +I +  H  + K N+  +         FLPRVLNK+ L VYP   I P  S++TGL N NL  Q  FD+    L+  F+ RL  P+CLVAHNGN +DFP+LQ+EL K   EL  D++C D+ +G +E+    +N     ++  KP    N ++        +  ++ + G    E+D+E+D V E +    Q+  +  S ++D    + M   +  NE+TP +      +  QIN            + ++   ++ +  + F L ++++          H AEAD LALL     +G   L W+ +   PF   K +W
Sbjct:    1 METKTYVFFDLETTGLPQFENGTRITEISLVAASRDQIAD-KHNGVTKENNISND--------FLPRVLNKINLTVYPCKMIQPRASEITGLTNENLEVQHPFDEDLFKLIVHFMERLEKPICLVAHNGNKFDFPILQSELSKINKELPDDLYCADTLLGFREVLARPLNSEENAISGIKPLNDTNTKK--------AASLVPKCGWSCEEYDQELDQVTELAERFTQEDNSLDSDKLDRKIQAEMQRMRAVNEKTPQRKSRKSDTCQQIN----------LPNVRRKILNDQQPRRKFDLKSVYESTTNREFVNCHRAEADALALLECVTAVGRPILEWMDSKRIPFKSIKKIW 328          
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Match: A0A6M2DCU2_9NEOP (Putative three prime repair exonuclease (Fragment) n=1 Tax=Xenopsylla cheopis TaxID=163159 RepID=A0A6M2DCU2_9NEOP)

HSP 1 Score: 145 bits (366), Expect = 4.810e-37
Identity = 105/354 (29.66%), Postives = 171/354 (48.31%), Query Frame = 1
Query:   13 EMKTLVYFDIEATGLKSS--GRPRISEISFVAINTQEILNLNHKLLEKLNDTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQSRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGSDIFCVDSYVGLKEI-----FKNSMNKPLAVVAKPAERENLEEKTVEKEMQSVKILLET--GEFDKEMDAVEEKSIALRQDLPNEQSIRIDHSNMLIGKKENEQTPLKNGIPLSSIVQINKRKQWQSTEVFKSKKKLKFSECEY-PK-SFSLINLHKQLLGYLPTISHGAEADCLALLRITAVIGDKWLVWVKNNSSPFSETKSM 1041
            ++ T V+FD E TGL      R RI+E++ +A     ++  +                   +T LPRVL+KLTLC+ P   I    +++TGL N  L  Q  FD  T +L++ FLSRLP P+CLVAHNGN +D+PLLQ E+ K G +L  DI C DS +  KE+       +++  PL    KP ++E ++++++  ++     +L+    EF  E++    + +                      K  NE TP +     SS  + N R + +    +         +C + P+ SF L++++K++       +H AE D L L+ I     + + +W  +NS PF   KS+
Sbjct:   27 KINTFVFFDTETTGLPEYEFNRTRITELTMIAAGRDHLMECD-------------------KTVLPRVLHKLTLCINPRKLITS--TEITGLANDMLEHQRVFDIDTVNLIQLFLSRLPGPICLVAHNGNKFDYPLLQKEIKKLGQKLSEDILCADSLIAFKELHDSYLMPDNLQSPLFNDVKPLDKEIVDDESISADVLDCSKILDNKFNEFKNELNEYVPEDV----------------------KNRNETTPKR--ATSSSYAENNIRAKKERRNGYHMNNSTNAKKCLFVPRTSFKLVDIYKRIFNEDAKDAHNAEGDVLTLIHIAIACKENFFLWCDDNSIPFHLVKSL 335          
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Match: A0A6P9AAJ4_THRPL (uncharacterized protein LOC117653498 n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P9AAJ4_THRPL)

HSP 1 Score: 144 bits (362), Expect = 1.060e-36
Identity = 109/368 (29.62%), Postives = 171/368 (46.47%), Query Frame = 1
Query:    7 MIEMKTLVYFDIEATGLKS-SGRPRISEISFVAINTQEILNLNHKLLEKLNDTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQSRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGSDIFCVDSYVGLKEIF-----------------KNSMNKPLAVVAKPAER----ENLEEKTVEKEMQSVKILLETGEFDKEMDAVEEKSIALRQDLPNEQSIRIDHSNMLIGKKENEQTPLKNGIPLSSIVQINKRKQWQSTEVFKSKKKLKFSECEYPKSFSLINLHKQLLGYLPTISHGAEADCLALLRITAVIGDKWLVWVKNNSSPFSETKSMW 1044
            M+  K+ V  D+E++GL +  G+ +I+E+SF+ + T  +L  +H+  E                  PRVL KL+LC YP   I  E +++TGLDN+ L +   F+    D++ +FLSR+P P+CL+AHNG  +DF LL++EL     EL  DIFC DS +  + IF                 +N+++       KP +      +LE   +  E+ SV       EF K  +   + S+  RQ+ P  +    D+ N               G     IV+          ++FK + K        P S+ L++L+  + G  P   H AE+D ++LL        ++L WV+NNS PF     MW
Sbjct:    1 MLPFKSFVILDLESSGLPAFGGKTKITELSFIGVLTDHLLE-SHRKSESA----------------PRVLQKLSLCFYPQKRIDFEATEITGLDNFLLEEIPAFNNEACDIVASFLSRMPSPLCLIAHNGMKFDFQLLKSELAAKKKELPDDIFCADSILAYRTIFPATSQKFATSPGLISPVRNTISSDPVTPPKPVQLISNGSDLECSKINSELPSV------SEFKKTNETTPKHSV--RQECPPLKRKNADNEN---------------GDSQGKIVR---------KKLFKGQGK--------PDSYKLVDLYSHIHGKGPEYGHRAESDSMSLLECVVATAPEFLSWVENNSLPFKRIPCMW 311          
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Match: A0A6B2EKL9_9DIPT (Putative three prime repair exonuclease 1 n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2EKL9_9DIPT)

HSP 1 Score: 144 bits (363), Expect = 1.290e-36
Identity = 113/355 (31.83%), Postives = 179/355 (50.42%), Query Frame = 1
Query:   10 IEMKTLVYFDIEATGLKS-SGRPRISEISFVAINTQEILNLNHKLLEKLNDTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQSRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGSDIFCVDSYVGLKEIFKNSMNKPLAVVAKPAERENLEE--KTVEKEMQSVKILLETGEFDKEMDAVEEKSIALRQDLPNEQSIRIDH--SNMLIGKKENEQTPLKNGIPLSSIVQINKRKQWQSTEVF----------KSKKKLKFSECEYPKSFSLINLHKQLLGYLPTISHGAEADCLALLRITAVIGDKWLVWVKNNSSPFSE 1029
            +E+K+ ++FD E TGL   +G  +I EIS VA +      ++H +     +T            +PRVL+KL+LCV P   I  E S++TGLDNY +  +S+   R  +++K+F+ RL  PVCLVAHNGN YDFPLL+ E +K  + +   + CVDS V  ++I +          A+  ER+  EE  + +E E++ ++ L    E    +     +   ++Q+  NE    I        I +K NE TP K     SS  ++ +R+   S E            KS+K+L F E    + + L ++H++  G LP  +H AE+DC AL++        +L   + +S  F E
Sbjct:    3 VEIKSFIFFDTEGTGLPQFNGPAKIVEISLVACS------VDHFVASSSGETPQ----------IPRVLHKLSLCVNPFKRICEESSRITGLDNYKVEFESKLGVRELEMIKSFVERLQQPVCLVAHNGNGYDFPLLRKEFIKHNVAVPEGLLCVDSLVVFRKIDQ----------ARDRERQEDEEVARFIENELREIERLEREEEL---LTQNLGECSGVKQETKNENDYEILELLECKSIHQKRNETTP-KRSATSSSPPRLGRRRGQSSPEETPQKARDEQTPKSRKQL-FPEKSEKRRYRLCDIHQRFFGVLPKDTHQAESDCFALMKCALKEARDFLSMAQAHSRTFQE 326          
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Match: A0A8J2RMR6_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RMR6_9CRUS)

HSP 1 Score: 138 bits (347), Expect = 6.750e-35
Identity = 103/343 (30.03%), Postives = 156/343 (45.48%), Query Frame = 1
Query:   22 TLVYFDIEATGLKSSGRPRISEISFVAINTQEILNLNHKLLEKLNDTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQSRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGSDIFCVDSYVGLKEIFKNS--MNKPLAVVAKPAERENLEEKTVEKEMQSVKILLETGEFDKEMDAVEEKSIALRQDLPNEQSIRIDHSNMLIGKKENEQTPLKNGIPLSSIVQINKRKQWQSTEVFKSKKKLKFSECEYPKSFSLINLHKQLLGYLPTISHGAEADCLALLRITAVIGDKWLVWVKNNSSPFSETKSMW 1044
            +LV+FD+E TGL S   P+I+E+SF A+   + LN              P+ I       PRV N+L LC+YP   + PE +  T LDNYNL  QSRFD+   +L+ +FL+RL  P+CL+AHNG  +DFP+L++E+ K G EL  +IFC DS    +++   S   N  LA      E  N                                      ++P   SI  +   ++     NE+TP K  +    + + N +                  +C    +F L ++++++ G  P +SH AEAD +ALL        ++L  + + S PF   K  W
Sbjct:   13 SLVFFDLETTGLPSFHCPKITELSFCAVERHQFLN------------GQPKEI-------PRVTNRLNLCIYPSRLVDPEATNKTKLDNYNLEHQSRFDEDVFNLIYSFLNRLKKPICLIAHNGYKFDFPILRSEIAKLGKELPGEIFCADSLNIFRKLQDPSTIFNMDLASQIVTTEPTN--------------------------------------NIPA--SINFNPFQLI-----NEKTPEKKKLGEQHVNRNNPQ-----------------PKCRKRLTFRLEDVYEKVYGERPPVSHEAEADVIALLLSAIATPTEFLNAIDSESVPFVNIKKCW 274          
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Match: UPI001EDD97F2 (three-prime repair exonuclease 1-like n=2 Tax=Daphnia TaxID=6668 RepID=UPI001EDD97F2)

HSP 1 Score: 137 bits (345), Expect = 1.320e-34
Identity = 100/341 (29.33%), Postives = 148/341 (43.40%), Query Frame = 1
Query:   22 TLVYFDIEATGLKSSGRPRISEISFVAINTQEILNLNHKLLEKLNDTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQSRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGSDIFCVDSYVGLKEIFKNSMNKPLAVVAKPAERENLEEKTVEKEMQSVKILLETGEFDKEMDAVEEKSIALRQDLPNEQSIRIDHSNMLIGKKENEQTPLKNGIPLSSIVQINKRKQWQSTEVFKSKKKLKFSECEYPKSFSLINLHKQLLGYLPTISHGAEADCLALLRITAVIGDKWLVWVKNNSSPFSETKSMW 1044
            +LV+FD+E TGL +   P+I+E+SF A+   + LN   K +                   PRV N+L LC+YP   + PE +  T LDNYNL  QSRFD+   +L+ +FL+RL  P+CL+AHNG  +DFP+L++E+ K G EL   IFC DS +  +++  N     +   A P    N  +             L           + EK+   R                    K NEQ   +NG P                            +C     F L ++++++ G  P +SH AEAD +ALL        ++L  + + S P    K  W
Sbjct:   13 SLVFFDLETTGLPAYHCPKITELSFCAVERHQFLNGQPKAM-------------------PRVTNRLNLCIYPSRLVDPEATNKTKLDNYNLEHQSRFDEDVFNLIYSFLNRLKKPICLIAHNGYNFDFPILRSEIAKLGKELPGGIFCADSLIIFRKLQNNPSTIAIMDFACPTVMTNFADP------------LPVSNNVNPFQLINEKTPEKR--------------------KVNEQYGNRNGEP----------------------------KCRKRLPFRLEDVYERVYGEKPPMSHEAEADVIALLLAAIATPVEFLNAIDSESIPLVSIKKCW 274          
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Match: A0A1B6L8W3_9HEMI (Exonuclease domain-containing protein n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6L8W3_9HEMI)

HSP 1 Score: 138 bits (347), Expect = 2.220e-34
Identity = 107/359 (29.81%), Postives = 170/359 (47.35%), Query Frame = 1
Query:   10 IEMKTLVYFDIEATGLK--SSGRPRISEISFVAINTQEILNLNHKLLEKLNDTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQSRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGSDIFCVDSYVGLKEIFKNSMNKPLAVVA--KPAERENLEEKTVEKEMQSVKILLETG----EFDKEMDAVEEKSIALRQDLPN------EQSIRIDHSNMLIGKKENEQTPLKNGIPLSSIVQINKRKQWQSTEVFKSKKKLKFSECEYPKSFSLINLHKQLLGYLPTISHGAEADCLALLRITAVIGDKWLVWVKNNSSPFSETKSMW 1044
            +E KT V+ D+E TGL    SG  RI+EI+ +A     IL+ +  +++        E+ +D   FLPRVLNKL L VYP   I P  S++TGL N NL  Q  F++   +++  F++RL  P+CLVAHNG+ +D+P+ ++EL K   EL  D+FC D+  G +E+  +      + VA  KP   +            +  ++ + G    E+D E++   E +    ++  +      E  I+I+   M   +  NE TP +          +N             K+K+  ++    + F + +++K   G     SH AE D  ALL     +G   L W+     PF   K MW
Sbjct:    1 METKTFVFLDLETTGLPHCESGPTRITEIALIAARRDHILDQSSGVVK--------ENSID-NDFLPRVLNKLNLTVYPSKMIQPRASEVTGLTNENLELQGPFNESLFNIIDNFMARLEKPICLVAHNGDRFDYPIFKSELFKINKELSDDVFCADTLPGFREVLTSPPGSGDSAVAGIKPLNTQT-----------AASLVPKCGWSCEEYDHELNQATELAEKFTEEFSSYDNDELESKIQIE---MERRRNINETTPHRRTRNSDICQPVNSN----------VKRKI-LNDKPSRRKFDMKSVYKSTTGKELVNSHRAETDAQALLECVTAVGLPILEWMDRKRIPFRSIKKMW 325          
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Match: E9H2N0_DAPPU (Exonuclease domain-containing protein (Fragment) n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9H2N0_DAPPU)

HSP 1 Score: 131 bits (329), Expect = 7.590e-34
Identity = 66/159 (41.51%), Postives = 96/159 (60.38%), Query Frame = 1
Query:   22 TLVYFDIEATGLKSSGRPRISEISFVAINTQEILNLNHKLLEKLNDTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQSRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGSDIFCVDSYVGLKEI 498
            +LV+FD+E TGL +   P+I+E+SF A+   + LN   K +                   PRV N+L LC+YP   + PE +  T LDNYNL  QSRFD+   +L+ +FL+RL  P+CL+AHNG  +DFP+L++E+ K G EL   IFC DS +  +++
Sbjct:    1 SLVFFDLETTGLPAFHCPKITELSFCAVERHQFLNGQPKAM-------------------PRVTNRLNLCIYPSRLVDPEATNKTKLDNYNLEHQSRFDEDVFNLIYSFLNRLKKPICLIAHNGYNFDFPILRSEIAKLGKELPGGIFCADSLIIFRKL 140          
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Match: A0A0P6FGB0_9CRUS (Three prime repair exonuclease n=5 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6FGB0_9CRUS)

HSP 1 Score: 135 bits (340), Expect = 7.830e-34
Identity = 100/341 (29.33%), Postives = 155/341 (45.45%), Query Frame = 1
Query:   22 TLVYFDIEATGLKSSGRPRISEISFVAINTQEILNLNHKLLEKLNDTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQSRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGSDIFCVDSYVGLKEIFKNSMNKPLAVVAKPAERENLEEKTVEKEMQSVKILLETGEFDKEMDAVEEKSIALRQDLPNEQSIRIDHSNMLIGKKENEQTPLKNGIPLSSIVQINKRKQWQSTEVFKSKKKLKFSECEYPKSFSLINLHKQLLGYLPTISHGAEADCLALLRITAVIGDKWLVWVKNNSSPFSETKSMW 1044
            +LV+FD+E TGL +   P+I+E+SF A+   + L+              P+ +       PRV N+L LC+YP   + PE +  T LDNYNL  QS+FD+    ++ +FL+RL  P+CL+AHNG  +DFP+L++E+ K   EL  +IFC DS +  +++ + S N    +                       I + T EF      V    +                         NE+TP K         + NK    ++TEV          +C    +F L ++++++ G  P  SH AEAD +ALL        ++L  V  +S PF+  K  W
Sbjct:   20 SLVFFDLETTGLPAFHSPKITELSFCAVERNQFLH------------GQPKQV-------PRVTNRLNLCIYPSRLVDPEATNKTKLDNYNLEHQSKFDEDVFSVIFSFLNRLKKPICLIAHNGFRFDFPILRSEIAKLEKELPEEIFCADSLLIFRKLQRPSANSEFVIED---------------------ITISTVEFPLVPTPVNPFQLI------------------------NEKTPEKK--------KPNKLNLTRNTEV----------KCRKRLTFRLEDVYERVYGQKPATSHVAEADVIALLLSAIATPTEFLNAVDCDSVPFTSIKKCW 278          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100491.47.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1B6JLD2_9HEMI4.850e-4434.29Exonuclease domain-containing protein n=1 Tax=Homa... [more]
A0A1B6FXI8_9HEMI1.200e-4131.83Exonuclease domain-containing protein n=1 Tax=Cuer... [more]
A0A6M2DCU2_9NEOP4.810e-3729.66Putative three prime repair exonuclease (Fragment)... [more]
A0A6P9AAJ4_THRPL1.060e-3629.62uncharacterized protein LOC117653498 n=1 Tax=Thrip... [more]
A0A6B2EKL9_9DIPT1.290e-3631.83Putative three prime repair exonuclease 1 n=1 Tax=... [more]
A0A8J2RMR6_9CRUS6.750e-3530.03Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
UPI001EDD97F21.320e-3429.33three-prime repair exonuclease 1-like n=2 Tax=Daph... [more]
A0A1B6L8W3_9HEMI2.220e-3429.81Exonuclease domain-containing protein n=1 Tax=Grap... [more]
E9H2N0_DAPPU7.590e-3441.51Exonuclease domain-containing protein (Fragment) n... [more]
A0A0P6FGB0_9CRUS7.830e-3429.33Three prime repair exonuclease n=5 Tax=Daphnia mag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig100491contigF-distichus_contig100491:753..1805 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score133.3
Seed ortholog evalue2.2e-28
Seed eggNOG ortholog6669.EFX74034
KEGG koko:K10790,ko:K10791
KEGG Pathwayko04623,map04623
Hectar predicted targeting categoryother localisation
EggNOG free text desc.nucleic acid binding
EggNOG OGs3A68H@33154,3BSJR@33208,3CU4A@33213,420CN@6656,COG0847@1,KOG4793@2759
EC3.1.11.2
COG Functional cat.L
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons1
Model size1053
Cds size1047
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928924.533031-UTR-F-distichus_contig100491:752..7581622928924.533031-UTR-F-distichus_contig100491:752..758Fucus distichus monoicousUTRF-distichus_contig100491 753..758 +
1690885063.8705735-UTR-F-distichus_contig100491:752..7581690885063.8705735-UTR-F-distichus_contig100491:752..758Fucus distichus monoicousUTRF-distichus_contig100491 753..758 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928924.5473287-CDS-F-distichus_contig100491:758..18051622928924.5473287-CDS-F-distichus_contig100491:758..1805Fucus distichus monoicousCDSF-distichus_contig100491 759..1805 +
1690885063.8834162-CDS-F-distichus_contig100491:758..18051690885063.8834162-CDS-F-distichus_contig100491:758..1805Fucus distichus monoicousCDSF-distichus_contig100491 759..1805 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig100491.47.1prot_F-distichus_contig100491.47.1Fucus distichus monoicouspolypeptideF-distichus_contig100491 759..1805 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig100491.47.1

>prot_F-distichus_contig100491.47.1 ID=prot_F-distichus_contig100491.47.1|Name=mRNA_F-distichus_contig100491.47.1|organism=Fucus distichus monoicous|type=polypeptide|length=349bp
MIEMKTLVYFDIEATGLKSSGRPRISEISFVAINTQEILNLNHKLLEKLN
DTKSPEHILDLETFLPRVLNKLTLCVYPMATIMPEVSKLTGLDNYNLIDQ
SRFDKRTGDLLKAFLSRLPFPVCLVAHNGNLYDFPLLQAELVKTGIELGS
DIFCVDSYVGLKEIFKNSMNKPLAVVAKPAERENLEEKTVEKEMQSVKIL
LETGEFDKEMDAVEEKSIALRQDLPNEQSIRIDHSNMLIGKKENEQTPLK
NGIPLSSIVQINKRKQWQSTEVFKSKKKLKFSECEYPKSFSLINLHKQLL
GYLPTISHGAEADCLALLRITAVIGDKWLVWVKNNSSPFSETKSMWTI*
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mRNA from alignment at F-distichus_contig100491:753..1805+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig100491.47.1 ID=mRNA_F-distichus_contig100491.47.1|Name=mRNA_F-distichus_contig100491.47.1|organism=Fucus distichus monoicous|type=mRNA|length=1053bp|location=Sequence derived from alignment at F-distichus_contig100491:753..1805+ (Fucus distichus monoicous)
CAGAAGATGATAGAAATGAAGACATTGGTTTACTTTGACATTGAAGCAAC AGGATTGAAAAGTTCAGGAAGACCAAGAATCTCGGAAATATCTTTTGTGG CAATCAATACCCAAGAAATCTTAAACTTGAATCATAAACTATTGGAAAAA TTGAATGATACGAAAAGTCCTGAACATATTCTAGATTTGGAAACTTTCTT GCCAAGGGTTTTGAACAAGCTCACCTTATGTGTTTATCCTATGGCTACTA TAATGCCAGAGGTATCCAAACTTACTGGTTTGGACAATTATAATCTCATA GATCAGAGTAGGTTCGATAAGAGGACTGGGGACTTGCTTAAGGCATTTTT AAGTCGCTTGCCTTTTCCAGTGTGCTTGGTTGCTCACAATGGGAACTTGT ACGATTTCCCCTTACTACAAGCAGAATTAGTGAAAACAGGCATAGAACTA GGATCGGACATTTTCTGTGTTGATTCATATGTTGGTCTAAAGGAGATTTT CAAAAACAGCATGAACAAACCACTGGCTGTGGTAGCTAAACCAGCAGAGA GAGAAAACCTTGAAGAGAAGACCGTTGAGAAGGAAATGCAATCTGTCAAA ATACTTCTAGAAACTGGAGAATTTGACAAAGAGATGGATGCAGTTGAAGA AAAATCTATTGCACTCCGCCAAGATCTACCAAATGAACAGTCCATAAGAA TTGATCATTCTAACATGCTCATTGGGAAGAAAGAAAATGAACAAACCCCA CTCAAAAATGGCATTCCACTTTCCAGCATTGTTCAAATCAATAAGAGAAA GCAATGGCAGAGTACTGAAGTCTTCAAATCTAAGAAAAAGTTAAAGTTTT CTGAGTGTGAATACCCAAAGTCATTTTCTTTGATCAACCTCCATAAGCAA TTGTTGGGCTATTTGCCAACGATTTCCCATGGGGCAGAGGCTGACTGTCT GGCATTGCTTAGAATCACTGCTGTGATAGGAGATAAGTGGCTTGTTTGGG TAAAGAATAATAGCTCTCCATTCTCAGAGACTAAATCAATGTGGACAATT TAA
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Coding sequence (CDS) from alignment at F-distichus_contig100491:753..1805+

>mRNA_F-distichus_contig100491.47.1 ID=mRNA_F-distichus_contig100491.47.1|Name=mRNA_F-distichus_contig100491.47.1|organism=Fucus distichus monoicous|type=CDS|length=2094bp|location=Sequence derived from alignment at F-distichus_contig100491:753..1805+ (Fucus distichus monoicous)
ATGATAGAAATGAAGACATTGGTTTACTTTGACATTGAAGCAACAGGATT
GAAAAGTTCAGGAAGACCAAGAATCTCGGAAATATCTTTTGTGGCAATCA
ATACCCAAGAAATCTTAAACTTGAATCATAAACTATTGGAAAAATTGAAT
GATACGAAAAGTCCTGAACATATTCTAGATTTGGAAACTTTCTTGCCAAG
GGTTTTGAACAAGCTCACCTTATGTGTTTATCCTATGGCTACTATAATGC
CAGAGGTATCCAAACTTACTGGTTTGGACAATTATAATCTCATAGATCAG
AGTAGGTTCGATAAGAGGACTGGGGACTTGCTTAAGGCATTTTTAAGTCG
CTTGCCTTTTCCAGTGTGCTTGGTTGCTCACAATGGGAACTTGTACGATT
TCCCCTTACTACAAGCAGAATTAGTGAAAACAGGCATAGAACTAGGATCG
GACATTTTCTGTGTTGATTCATATGTTGGTCTAAAGGAGATTTTCAAAAA
CAGCATGAACAAACCACTGGCTGTGGTAGCTAAACCAGCAGAGAGAGAAA
ACCTTGAAGAGAAGACCGTTGAGAAGGAAATGCAATCTGTCAAAATACTT
CTAGAAACTGGAGAATTTGACAAAGAGATGGATGCAGTTGAAGAAAAATC
TATTGCACTCCGCCAAGATCTACCAAATGAACAGTCCATAAGAATTGATC
ATTCTAACATGCTCATTGGGAAGAAAGAAAATGAACAAACCCCACTCAAA
AATGGCATTCCACTTTCCAGCATTGTTCAAATCAATAAGAGAAAGCAATG
GCAGAGTACTGAAGTCTTCAAATCTAAGAAAAAGTTAAAGTTTTCTGAGT
GTGAATACCCAAAGTCATTTTCTTTGATCAACCTCCATAAGCAATTGTTG
GGCTATTTGCCAACGATTTCCCATGGGGCAGAGGCTGACTGTCTGGCATT
GCTTAGAATCACTGCTGTGATAGGAGATAAGTGGCTTGTTTGGGTAAAGA
ATAATAGCTCTCCATTCTCAGAGACTAAATCAATGTGGACAATTTAAATG
ATAGAAATGAAGACATTGGTTTACTTTGACATTGAAGCAACAGGATTGAA
AAGTTCAGGAAGACCAAGAATCTCGGAAATATCTTTTGTGGCAATCAATA
CCCAAGAAATCTTAAACTTGAATCATAAACTATTGGAAAAATTGAATGAT
ACGAAAAGTCCTGAACATATTCTAGATTTGGAAACTTTCTTGCCAAGGGT
TTTGAACAAGCTCACCTTATGTGTTTATCCTATGGCTACTATAATGCCAG
AGGTATCCAAACTTACTGGTTTGGACAATTATAATCTCATAGATCAGAGT
AGGTTCGATAAGAGGACTGGGGACTTGCTTAAGGCATTTTTAAGTCGCTT
GCCTTTTCCAGTGTGCTTGGTTGCTCACAATGGGAACTTGTACGATTTCC
CCTTACTACAAGCAGAATTAGTGAAAACAGGCATAGAACTAGGATCGGAC
ATTTTCTGTGTTGATTCATATGTTGGTCTAAAGGAGATTTTCAAAAACAG
CATGAACAAACCACTGGCTGTGGTAGCTAAACCAGCAGAGAGAGAAAACC
TTGAAGAGAAGACCGTTGAGAAGGAAATGCAATCTGTCAAAATACTTCTA
GAAACTGGAGAATTTGACAAAGAGATGGATGCAGTTGAAGAAAAATCTAT
TGCACTCCGCCAAGATCTACCAAATGAACAGTCCATAAGAATTGATCATT
CTAACATGCTCATTGGGAAGAAAGAAAATGAACAAACCCCACTCAAAAAT
GGCATTCCACTTTCCAGCATTGTTCAAATCAATAAGAGAAAGCAATGGCA
GAGTACTGAAGTCTTCAAATCTAAGAAAAAGTTAAAGTTTTCTGAGTGTG
AATACCCAAAGTCATTTTCTTTGATCAACCTCCATAAGCAATTGTTGGGC
TATTTGCCAACGATTTCCCATGGGGCAGAGGCTGACTGTCTGGCATTGCT
TAGAATCACTGCTGTGATAGGAGATAAGTGGCTTGTTTGGGTAAAGAATA
ATAGCTCTCCATTCTCAGAGACTAAATCAATGTGGACAATTTAA
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