mRNA_F-distichus_contig100449.45.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig100449.45.1
Unique NamemRNA_F-distichus_contig100449.45.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
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BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Match: D7G1X0_ECTSI (MAPK related serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X0_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 5.260e-74
Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 1 
Query:    1 QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLGKGLKLADFGSCRGIYSKQ 354
            QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKAL+HMHRKGIFHRDIKPENILIESTNDLG+GLKLADFGSCRGIYSKQ
Sbjct:   44 QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTNDLGRGLKLADFGSCRGIYSKQ 161
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BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Match: A0A7S1U4P2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4P2_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.080e-69
Identity = 109/118 (92.37%), Postives = 114/118 (96.61%), Query Frame = 1 
Query:    1 QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLGKGLKLADFGSCRGIYSKQ 354
            QVNNLREIQALRRLSP+ HVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLN QLV+SYMYQLLKAL+HMHRKGIFHRDIKPENILIE T D+G+GLKLADFGSCRGIYSKQ
Sbjct:   44 QVNNLREIQALRRLSPHPHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNAQLVKSYMYQLLKALDHMHRKGIFHRDIKPENILIEGTGDIGRGLKLADFGSCRGIYSKQ 161
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BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Match: A0A836CJ03_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ03_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.410e-69
Identity = 109/118 (92.37%), Postives = 116/118 (98.31%), Query Frame = 1 
Query:    1 QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLGKGLKLADFGSCRGIYSKQ 354
            QVNNLREIQALRRLSPNQH+ITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYL+ QLVRSYMYQLLKAL+HMHRKGIFHRDIKPENILIEST+++ +GLKLADFGSCRGIYSKQ
Sbjct:   44 QVNNLREIQALRRLSPNQHIITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLSDQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTSEVRRGLKLADFGSCRGIYSKQ 161
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BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Match: F0YHI2_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHI2_AURAN)

HSP 1 Score: 216 bits (549), Expect = 2.070e-67
Identity = 104/118 (88.14%), Postives = 113/118 (95.76%), Query Frame = 1 
Query:    1 QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLGKGLKLADFGSCRGIYSKQ 354
            QVNNLREIQALRRLSP+ H+ITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLN QL++SYM+QLL AL+HMHRKGIFHRDIKPENILIE+ +D+ KGLKLADFGSCRGIYSKQ
Sbjct:   10 QVNNLREIQALRRLSPHAHIITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNAQLIQSYMHQLLLALDHMHRKGIFHRDIKPENILIENKSDMNKGLKLADFGSCRGIYSKQ 127
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BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Match: A0A7S2BNA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNA4_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.060e-66
Identity = 103/118 (87.29%), Postives = 114/118 (96.61%), Query Frame = 1 
Query:    1 QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLGKGLKLADFGSCRGIYSKQ 354
            QVNNLREIQALRRLSP+QH+I LEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLN  L+RSYM+QL++AL HMHRKGIFHRDIKPENILIE+T+++G+GLKLADFGSCRGIYSKQ
Sbjct:   46 QVNNLREIQALRRLSPHQHIIALEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNANLIRSYMFQLVRALHHMHRKGIFHRDIKPENILIENTSEMGRGLKLADFGSCRGIYSKQ 163
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BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Match: A0A6H5KHA5_9PHAE (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA5_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.210e-66
Identity = 107/110 (97.27%), Postives = 110/110 (100.00%), Query Frame = 1 
Query:    1 QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLGKGLKLADFGS 330
            QVNNLREIQALRRLSPNQHV+TLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKAL+HMHRKGIFHRDIKPENILIESTNDLG+GLKLADFGS
Sbjct:   44 QVNNLREIQALRRLSPNQHVVTLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTNDLGRGLKLADFGS 153
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BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Match: A0A7S3ZQT9_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQT9_9STRA)

HSP 1 Score: 215 bits (548), Expect = 8.680e-66
Identity = 104/118 (88.14%), Postives = 113/118 (95.76%), Query Frame = 1 
Query:    1 QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLGKGLKLADFGSCRGIYSKQ 354
            QVNNLREIQALRRLSP+ H+ITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLN QL++SYM+QLL AL+HMHRKGIFHRDIKPENILIE+ +D+ KGLKLADFGSCRGIYSKQ
Sbjct:   48 QVNNLREIQALRRLSPHGHIITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNAQLIQSYMHQLLMALDHMHRKGIFHRDIKPENILIENKSDVNKGLKLADFGSCRGIYSKQ 165
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BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Match: A0A7S3GUW0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUW0_9STRA)

HSP 1 Score: 211 bits (537), Expect = 5.630e-65
Identity = 99/118 (83.90%), Postives = 114/118 (96.61%), Query Frame = 1 
Query:    1 QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLGKGLKLADFGSCRGIYSKQ 354
            QVNNLREIQALRRLSP++H+I+LEEVLYDQPTGRLALVFELMDANLYELIRGR+HYLN  L++SY++QL+K+L+HMH+KGIFHRDIKPENILIES+ D G+GLKLADFGSCRGIYSKQ
Sbjct:   13 QVNNLREIQALRRLSPHEHIISLEEVLYDQPTGRLALVFELMDANLYELIRGRKHYLNTNLIKSYIWQLMKSLDHMHKKGIFHRDIKPENILIESSTDQGRGLKLADFGSCRGIYSKQ 130
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BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Match: A0A7S2C9I9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C9I9_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.610e-60
Identity = 90/103 (87.38%), Postives = 96/103 (93.20%), Query Frame = 1 
Query:   46 PNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLGKGLKLADFGSCRGIYSKQ 354
            PNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLN  L+RSYM+QL +AL HMHRKGIFHRDIKPENILIE+   +G+GLKLADFGSCRGIYSKQ
Sbjct:    1 PNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNASLIRSYMFQLARALHHMHRKGIFHRDIKPENILIENRPQVGQGLKLADFGSCRGIYSKQ 103
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BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Match: A0A7S1CVI0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CVI0_9CHLO)

HSP 1 Score: 189 bits (481), Expect = 9.800e-60
Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 1 
Query:    1 QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLGKGLKLADFGSCRGIYSK 351
            QVNNLREIQALRRLSP+ H+ITLEEVLYDQPTGRLALVFELMDANLYE+IRGRR YL+  L+++Y++QLL AL+HMH KGIFHRDIKPENILIES  +    LKLADFGSCRGIYSK
Sbjct:   43 QVNNLREIQALRRLSPHAHIITLEEVLYDQPTGRLALVFELMDANLYEVIRGRRQYLHSDLIQTYIFQLLHALDHMHCKGIFHRDIKPENILIESCCEGLTTLKLADFGSCRGIYSK 159
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100449.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1X0_ECTSI5.260e-7498.31MAPK related serine/threonine protein kinase n=1 T... [more]
A0A7S1U4P2_9STRA2.080e-6992.37Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A836CJ03_9STRA2.410e-6992.37Kinase-like domain-containing protein n=1 Tax=Trib... [more]
F0YHI2_AURAN2.070e-6788.14Protein kinase domain-containing protein (Fragment... [more]
A0A7S2BNA4_9STRA1.060e-6687.29Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
A0A6H5KHA5_9PHAE1.210e-6697.27Protein kinase domain-containing protein (Fragment... [more]
A0A7S3ZQT9_9STRA8.680e-6688.14Hypothetical protein n=4 Tax=Pelagomonas calceolat... [more]
A0A7S3GUW0_9STRA5.630e-6583.90Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2C9I9_9STRA2.610e-6087.38Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1CVI0_9CHLO9.800e-6080.34Hypothetical protein (Fragment) n=1 Tax=Picochloru... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig100449contigF-distichus_contig100449:510..1734 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score217.6
Seed ortholog evalue3.1e-54
Seed eggNOG ortholog44056.XP_009039854.1
Preferred nameMOK
KEGG koko:K08830
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005929,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0010468,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044441,GO:0044463,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0097546,GO:0120025,GO:0120038,GO:0140096,GO:1901564
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0661@1,KOG0661@2759
EC2.7.11.22
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001
Exons2
Model size363
Cds size363
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928924.4133074-CDS-F-distichus_contig100449:509..6891622928924.4133074-CDS-F-distichus_contig100449:509..689Fucus distichus monoicousCDSF-distichus_contig100449 510..689 +
1690885063.8315966-CDS-F-distichus_contig100449:509..6891690885063.8315966-CDS-F-distichus_contig100449:509..689Fucus distichus monoicousCDSF-distichus_contig100449 510..689 +
1622928924.44031-CDS-F-distichus_contig100449:1551..17341622928924.44031-CDS-F-distichus_contig100449:1551..1734Fucus distichus monoicousCDSF-distichus_contig100449 1552..1734 +
1690885063.8496127-CDS-F-distichus_contig100449:1551..17341690885063.8496127-CDS-F-distichus_contig100449:1551..1734Fucus distichus monoicousCDSF-distichus_contig100449 1552..1734 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig100449.45.1prot_F-distichus_contig100449.45.1Fucus distichus monoicouspolypeptideF-distichus_contig100449 510..1734 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig100449.45.1

>prot_F-distichus_contig100449.45.1 ID=prot_F-distichus_contig100449.45.1|Name=mRNA_F-distichus_contig100449.45.1|organism=Fucus distichus monoicous|type=polypeptide|length=121bp
QVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELI
RGRRHYLNGQLVRSYMYQLLKALEHMHRKGIFHRDIKPENILIESTNDLG
KGLKLADFGSCRGIYSKQVQ*
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mRNA from alignment at F-distichus_contig100449:510..1734+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig100449.45.1 ID=mRNA_F-distichus_contig100449.45.1|Name=mRNA_F-distichus_contig100449.45.1|organism=Fucus distichus monoicous|type=mRNA|length=1225bp|location=Sequence derived from alignment at F-distichus_contig100449:510..1734+ (Fucus distichus monoicous)
CAGGTAAATAACCTGCGTGAGATACAGGCATTACGGAGGCTAAGCCCGAA
CCAGCATGTGATAACTCTCGAGGAGGTGCTGTACGACCAACCCACGGGTC
GGCTAGCGCTGGTTTTTGAGCTTATGGATGCTAACCTGTATGAGCTCATT
CGAGGGAGAAGACATTACCTCAACGGACAGGTATATACCAGAAGCGTTGA
ATAAATCTTACTTATAGTTAGGGCGACGTTCAAGAATTAGGGGTTTGTCA
TCGGAGTTGAAGAGATCAGATTACCGAGGCCTCCGCCCAGGACGCTGAAC
GGTACTTATTTAGTAGACGAAAAACAAGTACATTGGATTCCGCCGCAAGA
TAACATTGAATGTATACGATATATATATATATGCCGTCCGCGGTTGTCGT
GGTGTATCGATTAACTAGCGGGGGCCATGGAGCACCAGATTGGTATGATG
GATGCCTTCAGTAGCTTTGCAGTCGCGTGGTAGTGCACGGGATGACTTCC
CCATGCACTACTTTTCTTTTCTTTTCTTTTATTTCTTCGTTAGAGGGTCG
GAATTCGGTTCATTAGACGCCAGCCAGCGCGCATCGATCCAATTTCGCTT
CGAGACGATTTCATCTTGAAAAAATACTGGTGTCTAAAGCGTTAATGTTG
AACTTTTTTACCGCACTCAACGCGCGGAGTGAGTCAAAAGAACAAAAACC
TCGATGCTACACGGCACCACCCGTGGGCTGGCTCCCTCCAGGGGAGCCGA
AAAGCGCGCAGTATACATTTTTGTGAGGCTTTTCTTCAAGGTCGCCCGCC
TGAATACTTGACGCGCGTTTCACGAGCAGGACAGGTTGGCCATTTTATGT
ATCTCGGCAATTCAGGAACACGCCATGAACGCAACGCAGGGGTGCCAAGA
CTGACGAGGAAGCGAAGGTTCAACGCAAATCGATGCTGCCCCTGTATATT
GTTGTCGATACCCATCTACTTTTTTTTTAATCTGTTTTTTTTCCTGCCCG
TCTCCCCTCATATTTCATCCCCGCTTCCCCCTTTTCTCGCAGCTGGTGCG
CAGCTACATGTATCAGCTGCTCAAGGCTTTGGAGCACATGCACAGGAAGG
GAATCTTCCATCGAGACATCAAGCCAGAAAACATCCTCATCGAGAGTACC
AACGACCTGGGCAAGGGTCTGAAGCTAGCCGACTTCGGTTCTTGTCGAGG
CATATACTCGAAGCAGGTGCAATGA
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Coding sequence (CDS) from alignment at F-distichus_contig100449:510..1734+

>mRNA_F-distichus_contig100449.45.1 ID=mRNA_F-distichus_contig100449.45.1|Name=mRNA_F-distichus_contig100449.45.1|organism=Fucus distichus monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at F-distichus_contig100449:510..1734+ (Fucus distichus monoicous)
CAGGTAAATAACCTGCGTGAGATACAGGCATTACGGAGGCTAAGCCCGAA
CCAGCATGTGATAACTCTCGAGGAGGTGCTGTACGACCAACCCACGGGTC
GGCTAGCGCTGGTTTTTGAGCTTATGGATGCTAACCTGTATGAGCTCATT
CGAGGGAGAAGACATTACCTCAACGGACAGCAGGTAAATAACCTGCGTGA
GATACAGGCATTACGGAGGCTAAGCCCGAACCAGCATGTGATAACTCTCG
AGGAGGTGCTGTACGACCAACCCACGGGTCGGCTAGCGCTGGTTTTTGAG
CTTATGGATGCTAACCTGTATGAGCTCATTCGAGGGAGAAGACATTACCT
CAACGGACAGCTGGTGCGCAGCTACATGTATCAGCTGCTCAAGGCTTTGG
AGCACATGCACAGGAAGGGAATCTTCCATCGAGACATCAAGCCAGAAAAC
ATCCTCATCGAGAGTACCAACGACCTGGGCAAGGGTCTGAAGCTAGCCGA
CTTCGGTTCTTGTCGAGGCATATACTCGAAGCAGGTGCAATGACTGGTGC
GCAGCTACATGTATCAGCTGCTCAAGGCTTTGGAGCACATGCACAGGAAG
GGAATCTTCCATCGAGACATCAAGCCAGAAAACATCCTCATCGAGAGTAC
CAACGACCTGGGCAAGGGTCTGAAGCTAGCCGACTTCGGTTCTTGTCGAG
GCATATACTCGAAGCAGGTGCAATGA
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