mRNA_F-distichus_contig100406.44.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Match: A0A6H5L120_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L120_9PHAE) HSP 1 Score: 163 bits (413), Expect = 8.820e-44 Identity = 102/166 (61.45%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 1 MGNVSTTRRKSTSKELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPGSDAPGVVNVSSGPAIE---SGSMMLYGSSMTLSGA-GFSSR-------GGAGSGHFG------------HXXXXXXXXXVYQTEECPICFMHYQGVNRTVCCSKPLCTECYLQVK 429
MGNVSTTRRKS SKELEKYC+PTGLYETCPWEERVVRRWI++G VAPRYPG+DAP S GP E SG L +S++ G G+ S G G+G G XXXXXXXXX TEECPICFMHY GVNRT CC+KPLCTECYLQV+
Sbjct: 1 MGNVSTTRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMDGQVAPRYPGADAP-----SFGPGKEASGSGGGGLGSASVSAGGVIGYESTVRATFGPGAVGTGRSGGVGAAXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTTCCAKPLCTECYLQVR 161
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Match: D8LDS6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS6_ECTSI) HSP 1 Score: 162 bits (409), Expect = 3.050e-43 Identity = 99/168 (58.93%), Postives = 112/168 (66.67%), Query Frame = 1
Query: 1 MGNVSTTRRKSTSKELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPGSDAPGVVNVSSGPAIES--GSMMLYGSSMTLSGA--GFSSR-------GGAGSGHFGHXXXXXXXXXVY--------------QTEECPICFMHYQGVNRTVCCSKPLCTECYLQVK 429
MGNVSTTRRKS SKELEKYC+PTGLYETCPW+ERVVRRWI++G VAPRYPG+DAP GP E+ G GS+ +G G+ + G G+G G XXXXXXXXX QTEECPICFMHY GVNRT CC+KPLCTECYLQV+
Sbjct: 1 MGNVSTTRRKSGSKELEKYCKPTGLYETCPWDERVVRRWIMDGQVAPRYPGADAPSF----GGPGKEASGGXXXXLGSASVSAGGVIGYETTVRATFGPGAVGTGRSGXXXXXXXXXXXXXXXXXXXXXXXXXKQTEECPICFMHYHGVNRTTCCAKPLCTECYLQVR 164
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Match: A0A835Z3B9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B9_9STRA) HSP 1 Score: 106 bits (265), Expect = 4.990e-25 Identity = 57/145 (39.31%), Postives = 72/145 (49.66%), Query Frame = 1
Query: 1 MGNV--STTRRKSTSKELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPGSDAPGVVNVSSGPAIESGSMMLYGSSMTLSGAGFSSRGGAGSGHFGHXXXXXXXXXVYQTEECPICFMHYQGVNRTVCCSKPLCTECYLQVK 429
MGN+ + + K ++ELE+YC+PTGLY +CPWEE+ VR+WILEG VAPR+P D P + G+ EECPICFM N TVCC KPLCTECYLQ++
Sbjct: 1 MGNLPAAVSHHKGKNRELERYCKPTGLYPSCPWEEKTVRKWILEGKVAPRFPPLDNP-----------DDGA-----------------------------------------EECPICFMFCHATNTTVCCGKPLCTECYLQLR 93
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Match: H3GTB9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTB9_PHYRM) HSP 1 Score: 94.7 bits (234), Expect = 2.070e-20 Identity = 56/145 (38.62%), Postives = 72/145 (49.66%), Query Frame = 1
Query: 1 MGNVSTTRRKSTS-KELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPGSDAPGVVNVSSGPAIESGSMMLYGSSMTLSGAGFSSRGGAGSGHFGHXXXXXXXXXVYQTEECPICFMHYQG-VNRTVCCSKPLCTECYLQVK 429
MGN ++ RR STS +ELEKY +PTGLY +CPWE + RR I+E +APR+PG +A G F T ECPICFM Y G +N + CCSKP+C+ECYLQ++
Sbjct: 1 MGNSTSKRRHSTSTRELEKYAQPTGLYPSCPWELKTARRLIVERKLAPRFPGKEAK-------------------------------------DGAF--------------TLECPICFMFYPGSLNMSSCCSKPICSECYLQIR 94
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Match: A0A8K1C573_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C573_PYTOL) HSP 1 Score: 90.9 bits (224), Expect = 5.830e-19 Identity = 52/144 (36.11%), Postives = 68/144 (47.22%), Query Frame = 1
Query: 1 MGNVSTTRRKSTSKELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPGSDAPGVVNVSSGPAIESGSMMLYGSSMTLSGAGFSSRGGAGSGHFGHXXXXXXXXXVYQTEECPICFMHYQG-VNRTVCCSKPLCTECYLQVK 429
MGN S +R S S+EL+++ PTGLY +CPW+ R VRR ILE +APR+PG D+ T+ECPICFM+Y G +N CC KP+C+ECYLQ+K
Sbjct: 1 MGN-SPPKRASISRELDRFTHPTGLYPSCPWDFRSVRRMILEKKIAPRFPGRDSK---------------------------------------------------ESCFTQECPICFMYYPGSLNTATCCKKPICSECYLQLK 92
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Match: A0A6A3WZI7_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WZI7_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.860e-18 Identity = 50/147 (34.01%), Postives = 74/147 (50.34%), Query Frame = 1
Query: 1 MGNVSTTRRKS---TSKELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPGSDAPGVVNVSSGPAIESGSMMLYGSSMTLSGAGFSSRGGAGSGHFGHXXXXXXXXXVYQTEECPICFMHYQG-VNRTVCCSKPLCTECYLQVK 429
MGN ++ + K +S+EL+K+ +PTGLY++CPWE + RR I+E +APR+PG +A G+F T ECPICFM Y G +N++ CC+KP+C+ECYLQ++
Sbjct: 1 MGNSTSRKAKRQSVSSRELDKFTQPTGLYQSCPWELKAARRLIVERKIAPRFPGREAK-------------------------------------DGNF--------------TLECPICFMFYPGSLNKSSCCNKPICSECYLQIR 96
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Match: A0A0P1A6S3_PLAHL (Ring u-box domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6S3_PLAHL) HSP 1 Score: 84.3 bits (207), Expect = 7.760e-17 Identity = 52/150 (34.67%), Postives = 71/150 (47.33%), Query Frame = 1
Query: 1 MGNVSTT-----RRKSTS-KELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPGSDAPGVVNVSSGPAIESGSMMLYGSSMTLSGAGFSSRGGAGSGHFGHXXXXXXXXXVYQTEECPICFMHYQG-VNRTVCCSKPLCTECYLQVK 429
MGN ++ RR ST ++L+K+ +PTGLY TCPWE + VRR I++ +APR+PG + G F T ECPICFM Y G +N + CCSKP+C+ECYLQ++
Sbjct: 1 MGNSTSKKSGLGRRHSTGMRDLDKFTQPTGLYSTCPWEHKTVRRLIVDKKLAPRFPGQETK-------------------------------------DGCF--------------TLECPICFMFYPGSLNASSCCSKPICSECYLQIR 99
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Match: A0A8J5J010_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J010_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.880e-16 Identity = 48/137 (35.04%), Postives = 65/137 (47.45%), Query Frame = 1
Query: 22 RRKSTSKELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPGSDAPGVVNVSSGPAIESGSMMLYGSSMTLSGAGFSSRGGAGSGHFGHXXXXXXXXXVYQTEECPICFMHYQG-VNRTVCCSKPLCTECYLQVK 429
R S+++ELEK+ +PTGLY +CPWE + RR I+E +APR+PG + G F T ECPICFM Y G +N + CC+KP+C+ECYLQV+
Sbjct: 14 RHSSSTRELEKFTQPTGLYPSCPWELKTARRLIMERRLAPRFPGQETK-------------------------------------EGCF--------------TLECPICFMFYPGSLNSSSCCNKPICSECYLQVR 99
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Match: A0A2P4XKL1_9STRA (RING-type domain-containing protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XKL1_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 2.110e-15 Identity = 46/142 (32.39%), Postives = 67/142 (47.18%), Query Frame = 1
Query: 7 NVSTTRRKSTSKELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPGSDAPGVVNVSSGPAIESGSMMLYGSSMTLSGAGFSSRGGAGSGHFGHXXXXXXXXXVYQTEECPICFMHY-QGVNRTVCCSKPLCTECYLQVK 429
N + R ++++ELEK+ +PTGLY +CPWE + RR I+E +APR+PG + I+ S L ECPICFM Y +N + CC+KP+C+ECYLQ++
Sbjct: 9 NGISRRHSASTRELEKFTQPTGLYPSCPWELKTARRLIIERKLAPRFPGKE------------IKETSFAL---------------------------------------ECPICFMFYPDSLNLSSCCNKPICSECYLQIR 99
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Match: A0A662YHN7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YHN7_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.930e-15 Identity = 50/146 (34.25%), Postives = 71/146 (48.63%), Query Frame = 1
Query: 1 MGNVSTTRRKSTSKELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPGSDAPGVVNVSSGPAIESGSMMLYGSSMTLSGAGFSSRGGAGSGHFGHXXXXXXXXXVYQTEECPICFM--HYQG-VNRTVCCSKPLCTECYLQVK 429
MGN + R +T++ELEKY +PTGLY +CPWE RR I+E +APR+PG + P M+ M LS Y+T+ F+ +Y G +N T CC+KP+C+ECYLQ++
Sbjct: 26 MGNSPSKRHSATTRELEKYTQPTGLYPSCPWEATTARRLIVERKLAPRFPGQETKEGCFALECPICF---MVFLRGLMALS------------------------VDEYETDLTDPVFVGQYYPGSLNMTTCCNKPICSECYLQIR 144 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100406.44.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig100406.44.1 >prot_F-distichus_contig100406.44.1 ID=prot_F-distichus_contig100406.44.1|Name=mRNA_F-distichus_contig100406.44.1|organism=Fucus distichus monoicous|type=polypeptide|length=152bp MGNVSTTRRKSTSKELEKYCRPTGLYETCPWEERVVRRWILEGHVAPRYPback to top mRNA from alignment at F-distichus_contig100406:552..1826- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig100406.44.1 ID=mRNA_F-distichus_contig100406.44.1|Name=mRNA_F-distichus_contig100406.44.1|organism=Fucus distichus monoicous|type=mRNA|length=1275bp|location=Sequence derived from alignment at F-distichus_contig100406:552..1826- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig100406:552..1826- >mRNA_F-distichus_contig100406.44.1 ID=mRNA_F-distichus_contig100406.44.1|Name=mRNA_F-distichus_contig100406.44.1|organism=Fucus distichus monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at F-distichus_contig100406:552..1826- (Fucus distichus monoicous)back to top |