mRNA_F-distichus_contig100371.40.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Match: D8LAY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY1_ECTSI) HSP 1 Score: 235 bits (599), Expect = 9.010e-74 Identity = 133/195 (68.21%), Postives = 147/195 (75.38%), Query Frame = 1
Query: 142 PPGQMDEAPPIPP-LNTGVSQMIVTRPGGTXXXXXXDGAQRR--------FYNPQLQSFSDGGAGGGQAPG--------LARGPSLPAGVTDPTEVGVSYILAKGYLSHELGMLGFPAYDRSQMLLGFYKEVQSSAGQTQVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYESCNGSLEKMREDAFMW 675
P QM+EAPP+PP LNTG+SQMIVTRPG +GA RR F + SF++ G GG PG LA SLP GVTDP EV V +ILAKGYLSHELGMLGFPAYDRSQ+LLGFYKEVQS+AGQTQV+FIPA RI NLD+RDTAATTEILREEMRKGSQSIISYE+CNGSL KMREDAFM+
Sbjct: 103 PSQQMEEAPPMPPALNTGMSQMIVTRPG-----TGGEGAPRRGLGDRGPSFGFGAMPSFAEAGGPGGGVPGGAAPSAVRLAHERSLPTGVTDPAEVSVYFILAKGYLSHELGMLGFPAYDRSQLLLGFYKEVQSTAGQTQVVFIPAQRIPNLDDRDTAATTEILREEMRKGSQSIISYENCNGSLPKMREDAFMY 292
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Match: A0A6H5JP05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP05_9PHAE) HSP 1 Score: 222 bits (566), Expect = 4.090e-64 Identity = 125/195 (64.10%), Postives = 145/195 (74.36%), Query Frame = 1
Query: 142 PPGQMDEAPPIPP-LNTGVSQMIVTRPGGTXXXXXXDGAQRRFYNPQ--------LQSFSDGGAGGG--------QAPGLARGPSLPAGVTDPTEVGVSYILAKGYLSHELGMLGFPAYDRSQMLLGFYKEVQSSAGQTQVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYESCNGSLEKMREDAFMW 675
P QMDE PP+PP LN+G+SQMIVTRPG +GA RR + + + SF++GG G A LA SLP GVTDP EV V +ILAKGYLSHELGMLGFPAYDRSQ+LLGFYKE+Q++AGQTQV+F+PA RI NLD+RDTAATTEILREEMRKGSQSIISYESCNGSL +MR+DAF +
Sbjct: 629 PSQQMDEVPPMPPSLNSGMSQMIVTRPG-----TGGEGAPRRGLSDRGPSFGFGAMPSFAEGGGPGXXXXXXXXXSAVRLAHERSLPTGVTDPAEVNVFFILAKGYLSHELGMLGFPAYDRSQLLLGFYKEMQNTAGQTQVVFLPAQRIPNLDDRDTAATTEILREEMRKGSQSIISYESCNGSLSQMRDDAFTY 818
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Match: A0A8K1FGD9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGD9_PYTOL) HSP 1 Score: 72.8 bits (177), Expect = 3.090e-11 Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 358 VTDPTEVGVSYILAKGYLSHELGMLGFPAYDRSQMLLGFYKEV-QSSAGQTQVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYESCNGSLEKMREDAFMW 675
V + E+ V Y+LA+ + +GFPA+D S LLGFY+E +SS+ T+VIF+P I + + + + T +LR E++ S ++ + CN L K++ED ++
Sbjct: 563 VAEAIEMQVFYVLARMITLNTTNAIGFPAFDASMNLLGFYQETRESSSATTEVIFVPVSDIPAITQVEISQTQRLLRTELKDNSSAVHTLARCNNDLVKLKEDVILF 669
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Match: A0A5D6XJB3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJB3_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 5.750e-11 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 358 VTDPTEVGVSYILAKGYLSHELGMLGFPAYDRSQMLLGFYKEVQSSAGQTQVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYESCNGSLEKMREDAFMW 675
VTD E+ V Y+LA+ +GFPA+D S LLGFY+E + A T+V+F+P I + + A T +LR E+++ S ++ + CN L K++ED ++
Sbjct: 601 VTDAIELQVYYVLARMITLDSSSAIGFPAFDGSMNLLGFYQEGRE-ATTTEVVFVPVSDIPAISPLEIAQTQRLLRSELKENSAAVYTLLRCNNDLVKLKEDVILF 705
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Match: A0A3M6VI80_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VI80_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 4.760e-10 Identity = 34/106 (32.08%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 358 VTDPTEVGVSYILAKGYLSHELGMLGFPAYDRSQMLLGFYKEVQSSAGQTQVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYESCNGSLEKMREDAFMW 675
+ D E+ V Y++A+ + +GFPA+D S LLGFY+E + +A T+V+F+P I + + + T +L+ EM+ S ++ + CN L K++ED ++
Sbjct: 597 IADAIEMQVFYVVARMITLNASNAIGFPAFDVSMNLLGFYQEGRENA-TTEVVFVPVSNISAISQGEILETQRLLQAEMKSNSSAVHTLARCNNDLVKLKEDVILF 701
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Match: A0A484DWH7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWH7_BRELC) HSP 1 Score: 68.2 bits (165), Expect = 1.180e-9 Identity = 34/106 (32.08%), Postives = 62/106 (58.49%), Query Frame = 1
Query: 358 VTDPTEVGVSYILAKGYLSHELGMLGFPAYDRSQMLLGFYKEVQSSAGQTQVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYESCNGSLEKMREDAFMW 675
+ D E+ + Y++A+ + +GFPA+D S LLGFY+E + +A T+V+F+PA I + + + T +L+ EM+ S ++ + CN L K++ED ++
Sbjct: 595 LADAIEMQIFYVVARMVTLNASNAIGFPAFDVSMNLLGFYQEGRENA-TTEVVFVPASDIPAISQGEVLETQRLLQAEMKGNSSAVHTLARCNNDLVKLKEDVILF 699
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Match: A0A0P1A660_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A660_PLAHL) HSP 1 Score: 68.2 bits (165), Expect = 1.180e-9 Identity = 34/106 (32.08%), Postives = 62/106 (58.49%), Query Frame = 1
Query: 358 VTDPTEVGVSYILAKGYLSHELGMLGFPAYDRSQMLLGFYKEVQSSAGQTQVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYESCNGSLEKMREDAFMW 675
+ D E+ V Y++A+ + +GFPA+D S LLGFY+E + +A T+V+F+PA I + + + T +L+ E++ S ++ + CN L K++ED ++
Sbjct: 597 IADAIEMQVFYVVARMVTLNSSNAIGFPAFDVSMHLLGFYQEGRENA-TTEVVFVPASDIPAISQGEVMETQRLLQAEIKGNSSAVHTLARCNNDLVKLKEDVILF 701
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Match: K3WML1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WML1_GLOUD) HSP 1 Score: 67.8 bits (164), Expect = 1.590e-9 Identity = 35/106 (33.02%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 358 VTDPTEVGVSYILAKGYLSHELGMLGFPAYDRSQMLLGFYKEVQSSAGQTQVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYESCNGSLEKMREDAFMW 675
V + E+ V Y+LA+ + +GFPA+D S LLGFY+E + +A T+V+F+P I + + + T +LR E++ S ++ + CN L K++ED ++
Sbjct: 599 VANAIEMQVFYVLARMITLNSSNAIGFPAFDASTNLLGFYQEGREAA-TTEVVFVPVSDIPAITQMEITQTQRLLRTELKDNSIAVHTLARCNNDLVKLKEDVILF 703
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Match: A0A6U3SMX2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SMX2_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 5.830e-8 Identity = 33/98 (33.67%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 382 VSYILAKGYLSHELGMLGFPAYDRSQMLLGFYKEVQSSAGQTQVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYESCNGSLEKMREDAFMW 675
+++++AK Y S + LGFP +D S+ LLGFY+E +S+ T++ FIP NL +D + ++IL ++ + S S+ + +G+LEK++E+ ++
Sbjct: 95 ITHVVAKIYTSQDQSPLGFPVFDSSKNLLGFYREHDNSS-VTEIKFIPLAHCDNLTSQDRFSASKILDAQIAQESGSVFQVK--DGNLEKVKENVMVY 189
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Match: A0A6G0WPZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPZ0_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 4.050e-5 Identity = 31/103 (30.10%), Postives = 57/103 (55.34%), Query Frame = 1
Query: 382 VSYILAKGYLSHELGMLGFPAYDRSQMLLGFYKEVQS--SAGQTQVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYE-SCNGSLEKMREDA--FMW 675
V +++A+ + + GFPA+D S LLGFY+E Q S TQ+ F+P + + L + + +++R E++ S ++ + N L+K++E+A F W
Sbjct: 475 VFFVVARMFPVGQSAYAGFPAFDHSLTLLGFYQEGQGNGSGSATQINFVPINDVHGLTQYEVMQCQQLVRRELKDNSDAVKRIDRDGNNDLDKLKENALIFYW 577 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100371.40.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig100371.40.1 >prot_F-distichus_contig100371.40.1 ID=prot_F-distichus_contig100371.40.1|Name=mRNA_F-distichus_contig100371.40.1|organism=Fucus distichus monoicous|type=polypeptide|length=225bp GGAGTGAGGPSGSTGNGPAGSSASVVGNGGGPGAGGVGGGGNVERSPPPGback to top mRNA from alignment at F-distichus_contig100371:696..2093- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig100371.40.1 ID=mRNA_F-distichus_contig100371.40.1|Name=mRNA_F-distichus_contig100371.40.1|organism=Fucus distichus monoicous|type=mRNA|length=1398bp|location=Sequence derived from alignment at F-distichus_contig100371:696..2093- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig100371:696..2093- >mRNA_F-distichus_contig100371.40.1 ID=mRNA_F-distichus_contig100371.40.1|Name=mRNA_F-distichus_contig100371.40.1|organism=Fucus distichus monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at F-distichus_contig100371:696..2093- (Fucus distichus monoicous)back to top |