mRNA_F-distichus_contig100345.38.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig100345.38.1
Unique NamemRNA_F-distichus_contig100345.38.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Match: UPI000C75FE92 (protein neuralized-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75FE92)

HSP 1 Score: 335 bits (860), Expect = 1.610e-110
Identity = 161/198 (81.31%), Postives = 179/198 (90.40%), Query Frame = 1
Query:    1 MGQGQSNPNGSTFYAF-GGTGPHHSSQPPLKFNNKHGDNCQILRDGSQAKRGESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQNLPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDKGLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMRRSLNNFA-GESSQQE 588
            MGQ QS  N STFYAF GG   ++SSQPPLKF++K G+NCQI R+GSQAKR ESFCKG++FSDRPV+ GERVCIRLTELSIRWSGVLR GF+SHNP+SIQ LPKYACPDLTGKPGYWAKALTERYAESNALIHYY+T NGDVHFGVNG DKG+FFSGVDTRQPLWC+IDLYGNCTA+E+VDMRRSLNNFA GE + +E
Sbjct:    1 MGQIQSASNNSTFYAFNGGAISNNSSQPPLKFSSKFGENCQIFREGSQAKRTESFCKGILFSDRPVDCGERVCIRLTELSIRWSGVLRFGFTSHNPLSIQTLPKYACPDLTGKPGYWAKALTERYAESNALIHYYYTPNGDVHFGVNGRDKGVFFSGVDTRQPLWCLIDLYGNCTALELVDMRRSLNNFARGEDTPEE 198          
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Match: A0A553PA75_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PA75_TIGCA)

HSP 1 Score: 248 bits (634), Expect = 1.750e-76
Identity = 109/174 (62.64%), Postives = 140/174 (80.46%), Query Frame = 1
Query:   61 PHHSSQPPLKFNNKHGDNCQILRDGSQAKRGESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQNLPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDKGLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMRRSLNNFAGESSQ 582
            P +   PPLKF+ K GDN  +   G +A+R ESFCKG+VFSDRPV +GE VC+RLT+LS RW+GV+R+GF++ NP  +  LPKYACP LT +PGYWAKAL+ERY +S+++IHY+   NGDVHFG  G+++G+FFSGVDTRQPLW MIDLYGNCT +E+VD+R +LNN+AG S Q
Sbjct:   41 PINMDAPPLKFHRKRGDNITLEAGGYKARRRESFCKGIVFSDRPVALGEWVCLRLTDLSDRWNGVVRVGFTNRNPALLGALPKYACPTLTSQPGYWAKALSERYTDSDSVIHYFVAGNGDVHFGAGGMNRGVFFSGVDTRQPLWAMIDLYGNCTGLELVDLRSNLNNYAGISPQ 214          
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Match: UPI001E2753A7 (protein neuralized isoform X1 n=2 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2753A7)

HSP 1 Score: 235 bits (599), Expect = 1.970e-70
Identity = 103/162 (63.58%), Postives = 130/162 (80.25%), Query Frame = 1
Query:   79 PPLKFNNKHGDNCQILRDGSQAKRGESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQN-LPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDKGLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMRRSLNN 561
            PPL F+N HGDN +I RDG+ AKR ESFCKG+ FS RPV++ E++CI+  E+SI WSGV+R GF+ ++P  +++ LPKYACPDLT KPGYWAKAL ER+   N ++ YY TS GDVHFG+NG +KG+FFSGVDTR PLW +ID+YGN TAIE VD+R +LNN
Sbjct:   58 PPLLFHNVHGDNIRISRDGTVAKRAESFCKGIAFSSRPVKVNEKICIKFLEISINWSGVIRFGFTYNDPSGLRSGLPKYACPDLTNKPGYWAKALPERFCSRNTVLFYYVTSAGDVHFGINGEEKGIFFSGVDTRGPLWALIDVYGNSTAIEFVDVRHNLNN 219          
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Match: A0A6J2XM07_SITOR (protein neuralized isoform X1 n=2 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2XM07_SITOR)

HSP 1 Score: 234 bits (598), Expect = 3.020e-70
Identity = 103/171 (60.23%), Postives = 135/171 (78.95%), Query Frame = 1
Query:   70 SSQPPLKFNNKHGDNCQILRDGSQAKRGESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQ-NLPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDKGLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMRRSLNNFAGESS 579
            ++ PPL F++ HGDN +I+RDG+ AKR ESFCKG+ FS RPV++ E+VCI+ +E+SI WSGVLR GF+S++P S++ +LPKYACPDLT KPGYWAKAL ER+   N+++ YY TS G VHFG+NG +KG+FF GV+TR PLW +ID+YGN TA+E VD R+ LNN     S
Sbjct:   48 NNSPPLLFHSVHGDNVRIMRDGTVAKRVESFCKGIAFSSRPVKVNEKVCIKFSEISINWSGVLRFGFTSNDPASLRYSLPKYACPDLTNKPGYWAKALAERFCTPNSVLFYYVTSTGAVHFGINGEEKGVFFGGVETRGPLWALIDVYGNSTAVEFVDYRQQLNNSRSNMS 218          
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Match: UPI001D0637AD (protein neuralized isoform X1 n=3 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D0637AD)

HSP 1 Score: 233 bits (595), Expect = 1.160e-69
Identity = 103/162 (63.58%), Postives = 131/162 (80.86%), Query Frame = 1
Query:   79 PPLKFNNKHGDNCQILRDGSQAKRGESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQN-LPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDKGLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMRRSLNN 561
            PPL F++ HGDN +ILRDG+ AKR ESFCKG+ FS RPV++ E++CI+  E+SI WSGV+R GF+ ++P S+++ LPKY CPDLT KPGYWAKAL ER+   N ++ YY TS GDVHFG+NG +KG+FFSGVDTR PLW +ID+YGN TAIE VD+R +LNN
Sbjct:   79 PPLLFHHVHGDNIRILRDGTVAKRVESFCKGISFSSRPVKVNEKICIKFLEISINWSGVIRFGFTYNDPSSLRSGLPKYTCPDLTNKPGYWAKALPERFCSRNTVLFYYVTSAGDVHFGINGEEKGIFFSGVDTRGPLWALIDVYGNSTAIEFVDVRHNLNN 240          
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Match: A0A2Z5U759_PIEBR (Uncharacterized protein (Fragment) n=11 Tax=Pieris TaxID=7115 RepID=A0A2Z5U759_PIEBR)

HSP 1 Score: 230 bits (587), Expect = 1.310e-69
Identity = 103/165 (62.42%), Postives = 129/165 (78.18%), Query Frame = 1
Query:   55 TGPHHSSQPPLKFNNKHGDNCQILRDGSQAKRGESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQN-LPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDKGLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMR 546
            TG   ++ PPL FN+ HG+N +I RDGS A+R ESFCKGV FS RPV + E++CIR  E+S  WSGV+R GF+SHNP ++ + +PKYACPDLT KPG WAKAL ER+ + + L+HYY TSNGDVHFG+NG DKG FFS VDTR PLW ++D+YGNCTA++ VD R
Sbjct:    6 TGGTPNNLPPLTFNSVHGENIRISRDGSIARRVESFCKGVAFSARPVRVNEKICIRFIEVSDSWSGVIRFGFTSHNPETLPHPIPKYACPDLTNKPGSWAKALGERFYDKDNLLHYYVTSNGDVHFGINGEDKGCFFSNVDTRSPLWALVDVYGNCTAVQFVDPR 170          
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Match: A0A8K0GER3_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0GER3_9COLE)

HSP 1 Score: 230 bits (587), Expect = 5.590e-69
Identity = 101/162 (62.35%), Postives = 128/162 (79.01%), Query Frame = 1
Query:   79 PPLKFNNKHGDNCQILRDGSQAKRGESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQN-LPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDKGLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMRRSLNN 561
            PPL F+N HGDN +I RDG+ A+R ESFCKG+ FS RPV++ E+VCI+  E+S  WSGV+R GF+ ++P +++N LPKYACPDLT KPGYWAKAL ER+   N ++ YY TS GDVHFG+NG +KG+FF GV+TR PLW +ID+YGN TAIE VD+R  LNN
Sbjct:   56 PPLLFHNVHGDNIRISRDGTVARRVESFCKGIAFSSRPVKVNEKVCIKFLEISNNWSGVIRFGFTYNDPSTLRNGLPKYACPDLTNKPGYWAKALAERFCSQNTILFYYVTSAGDVHFGINGEEKGIFFGGVETRGPLWALIDVYGNSTAIEFVDIRHQLNN 217          
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Match: UPI000874CA45 (protein neuralized isoform X1 n=2 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000874CA45)

HSP 1 Score: 231 bits (588), Expect = 7.240e-69
Identity = 102/162 (62.96%), Postives = 127/162 (78.40%), Query Frame = 1
Query:   79 PPLKFNNKHGDNCQILRDGSQAKRGESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQ-NLPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDKGLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMRRSLNN 561
            PPL F+N HG+N +I RDG+ AKR ESFCKG+ FS RPV+I E+VCI+  E+S  WSGV+R GF+ ++P S++  LPKYACPDLT KPGYWAKAL ER+     ++ YY TS GDVHFG+NG +KG+FFS V+TR PLWC+ID+YGN TAIE VD+R  LNN
Sbjct:   56 PPLLFHNVHGENIRISRDGTVAKRVESFCKGIAFSSRPVKINEKVCIKFLEISNNWSGVIRFGFTYNDPTSLRYGLPKYACPDLTNKPGYWAKALPERFCSQGTILFYYVTSTGDVHFGINGEEKGIFFSSVETRGPLWCLIDVYGNSTAIEFVDIRHQLNN 217          
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Match: A0A834IK69_RHYFE (Uncharacterized protein n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834IK69_RHYFE)

HSP 1 Score: 231 bits (588), Expect = 8.980e-69
Identity = 101/162 (62.35%), Postives = 133/162 (82.10%), Query Frame = 1
Query:   79 PPLKFNNKHGDNCQILRDGSQAKRGESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQ-NLPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDKGLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMRRSLNN 561
            PPL F++ HGDN +I+RDG+ AKR ESFCKG+ FS RPV++ E+VCI+  E+S  WSGVLRLGF++++P +++ +LPKYACPDLT KPGYWAKAL ER+   N+++ YY TS+G VHFG+NG +KG+FF+GV+TR PLW +ID+YGN TAIE VD R+ LNN
Sbjct:   52 PPLLFHSVHGDNVRIMRDGTVAKRVESFCKGIAFSSRPVKVNEKVCIKFVEISNNWSGVLRLGFTANDPANLRYSLPKYACPDLTNKPGYWAKALPERFCSPNSVLFYYVTSSGVVHFGINGEEKGVFFAGVETRGPLWALIDVYGNSTAIEFVDFRQQLNN 213          
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Match: A0A6J3C5X2_GALME (protein neuralized isoform X1 n=3 Tax=Pyralidae TaxID=7135 RepID=A0A6J3C5X2_GALME)

HSP 1 Score: 228 bits (580), Expect = 2.130e-68
Identity = 99/165 (60.00%), Postives = 128/165 (77.58%), Query Frame = 1
Query:   55 TGPHHSSQPPLKFNNKHGDNCQILRDGSQAKRGESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQN-LPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDKGLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMR 546
            TG   ++ PPL F++ HG+N ++ RDGS A+R ESFCKGV FS RPV + E+VC+R  E+S  WSGV+R GF++H+P ++ + LPKYACPDLT KPG WAKAL ER+ E + ++HYY  S GDVHFG+NG DKGLFFSGVDTR PLW ++D+YGNCTA++  D R
Sbjct:   16 TGGTPNNLPPLSFHSVHGENIRVSRDGSMARRVESFCKGVAFSARPVRVNEKVCVRFVEISNSWSGVIRFGFTTHDPATLAHALPKYACPDLTNKPGNWAKALGERFCEKDNILHYYVNSAGDVHFGINGEDKGLFFSGVDTRNPLWALVDVYGNCTAVQFADPR 180          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100345.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C75FE921.610e-11081.31protein neuralized-like n=1 Tax=Eurytemora affinis... [more]
A0A553PA75_TIGCA1.750e-7662.64Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
UPI001E2753A71.970e-7063.58protein neuralized isoform X1 n=2 Tax=Harmonia axy... [more]
A0A6J2XM07_SITOR3.020e-7060.23protein neuralized isoform X1 n=2 Tax=Sitophilus o... [more]
UPI001D0637AD1.160e-6963.58protein neuralized isoform X1 n=3 Tax=Coccinella s... [more]
A0A2Z5U759_PIEBR1.310e-6962.42Uncharacterized protein (Fragment) n=11 Tax=Pieris... [more]
A0A8K0GER3_9COLE5.590e-6962.35Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
UPI000874CA457.240e-6962.96protein neuralized isoform X1 n=2 Tax=Anoplophora ... [more]
A0A834IK69_RHYFE8.980e-6962.35Uncharacterized protein n=1 Tax=Rhynchophorus ferr... [more]
A0A6J3C5X2_GALME2.130e-6860.00protein neuralized isoform X1 n=3 Tax=Pyralidae Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig100345contigF-distichus_contig100345:24..663 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score225.7
Seed ortholog evalue1.9e-56
Seed eggNOG ortholog7070.TC000216-PA
Preferred nameneur
KEGG koko:K01931
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000209,GO:0001654,GO:0001709,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0002682,GO:0002683,GO:0003002,GO:0003006,GO:0003008,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006464,GO:0006807,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007398,GO:0007399,GO:0007422,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007498,GO:0007552,GO:0007560,GO:0007610,GO:0007611,GO:0007613,GO:0007616,GO:0008052,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008289,GO:0008356,GO:0008593,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010160,GO:0010646,GO:0010647,GO:0016020,GO:0016043,GO:0016360,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019827,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023051,GO:0023056,GO:0030154,GO:0030707,GO:0030718,GO:0030855,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0033036,GO:0035091,GO:0035107,GO:0035114,GO:0035120,GO:0035203,GO:0035204,GO:0035220,GO:0035239,GO:0035295,GO:0036211,GO:0042478,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045165,GO:0045314,GO:0045595,GO:0045596,GO:0045610,GO:0045611,GO:0045613,GO:0045614,GO:0045664,GO:0045747,GO:0046532,GO:0046872,GO:0046914,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048609,GO:0048645,GO:0048646,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048859,GO:0048869,GO:0050767,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0051093,GO:0051179,GO:0051239,GO:0051241,GO:0051259,GO:0051260,GO:0051301,GO:0051704,GO:0051960,GO:0060284,GO:0060429,GO:0060562,GO:0060581,GO:0060582,GO:0061630,GO:0061659,GO:0065003,GO:0065007,GO:0070647,GO:0071704,GO:0071840,GO:0071944,GO:0098727,GO:0140096,GO:1901564,GO:1901981,GO:1903706,GO:1903707,GO:2000026,GO:2000027
EggNOG free text desc.Zinc ion binding
EggNOG OGs38I58@33154,3BCD8@33208,3CWYJ@33213,3SJGI@50557,41TST@6656,KOG4172@1,KOG4172@2759,KOG4625@1,KOG4625@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Exons2
Model size588
Cds size588
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928923.8753948-CDS-F-distichus_contig100345:23..5401622928923.8753948-CDS-F-distichus_contig100345:23..540Fucus distichus monoicousCDSF-distichus_contig100345 24..540 -
1690885062.5364537-CDS-F-distichus_contig100345:23..5401690885062.5364537-CDS-F-distichus_contig100345:23..540Fucus distichus monoicousCDSF-distichus_contig100345 24..540 -
1622928923.8921332-CDS-F-distichus_contig100345:592..6631622928923.8921332-CDS-F-distichus_contig100345:592..663Fucus distichus monoicousCDSF-distichus_contig100345 593..663 -
1690885062.6521041-CDS-F-distichus_contig100345:592..6631690885062.6521041-CDS-F-distichus_contig100345:592..663Fucus distichus monoicousCDSF-distichus_contig100345 593..663 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig100345.38.1prot_F-distichus_contig100345.38.1Fucus distichus monoicouspolypeptideF-distichus_contig100345 24..663 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig100345.38.1

>prot_F-distichus_contig100345.38.1 ID=prot_F-distichus_contig100345.38.1|Name=mRNA_F-distichus_contig100345.38.1|organism=Fucus distichus monoicous|type=polypeptide|length=196bp
MGQGQSNPNGSTFYAFGGTGPHHSSQPPLKFNNKHGDNCQILRDGSQAKR
GESFCKGVVFSDRPVEIGERVCIRLTELSIRWSGVLRLGFSSHNPVSIQN
LPKYACPDLTGKPGYWAKALTERYAESNALIHYYFTSNGDVHFGVNGVDK
GLFFSGVDTRQPLWCMIDLYGNCTAIEMVDMRRSLNNFAGESSQQE
back to top

mRNA from alignment at F-distichus_contig100345:24..663-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig100345.38.1 ID=mRNA_F-distichus_contig100345.38.1|Name=mRNA_F-distichus_contig100345.38.1|organism=Fucus distichus monoicous|type=mRNA|length=640bp|location=Sequence derived from alignment at F-distichus_contig100345:24..663- (Fucus distichus monoicous)
ATGGGGCAGGGGCAAAGCAACCCTAATGGATCAACCTTCTATGCTTTTGG AGGAACTGGTCCTCACCACAGGTACAGGGTTAATAATAACACCTGGGATT TTTCTTTATGAAACTTGTTATAGTAGTCAACCACCTTTGAAGTTCAACAA CAAGCATGGTGACAACTGCCAGATTTTGAGAGATGGGAGCCAAGCAAAGA GGGGAGAAAGCTTCTGTAAGGGAGTTGTGTTCAGTGATCGGCCAGTTGAG ATTGGGGAGAGGGTTTGCATCAGGTTGACCGAGCTGTCAATAAGATGGTC TGGTGTACTCAGACTTGGGTTCAGCTCGCACAACCCCGTCTCCATACAAA ATTTGCCCAAATATGCCTGTCCTGATCTTACAGGCAAACCTGGCTATTGG GCCAAGGCTTTGACTGAGAGGTATGCAGAGTCAAATGCTCTGATTCACTA CTACTTCACCTCCAATGGAGATGTTCACTTTGGGGTGAATGGAGTTGACA AGGGGTTGTTCTTCAGTGGAGTTGACACCAGGCAACCCCTCTGGTGTATG ATAGATCTCTATGGTAACTGCACTGCTATTGAAATGGTGGATATGCGAAG GAGCCTCAACAACTTTGCAGGAGAGTCCTCACAACAAGAA
back to top

Coding sequence (CDS) from alignment at F-distichus_contig100345:24..663-

>mRNA_F-distichus_contig100345.38.1 ID=mRNA_F-distichus_contig100345.38.1|Name=mRNA_F-distichus_contig100345.38.1|organism=Fucus distichus monoicous|type=CDS|length=1176bp|location=Sequence derived from alignment at F-distichus_contig100345:24..663- (Fucus distichus monoicous)
ATGGGGCAGGGGCAAAGCAACCCTAATGGATCAACCTTCTATGCTTTTGG
AGGAACTGGTCCTCACCACAGATGGGGCAGGGGCAAAGCAACCCTAATGG
ATCAACCTTCTATGCTTTTGGAGGAACTGGTCCTCACCACAGTAGTCAAC
CACCTTTGAAGTTCAACAACAAGCATGGTGACAACTGCCAGATTTTGAGA
GATGGGAGCCAAGCAAAGAGGGGAGAAAGCTTCTGTAAGGGAGTTGTGTT
CAGTGATCGGCCAGTTGAGATTGGGGAGAGGGTTTGCATCAGGTTGACCG
AGCTGTCAATAAGATGGTCTGGTGTACTCAGACTTGGGTTCAGCTCGCAC
AACCCCGTCTCCATACAAAATTTGCCCAAATATGCCTGTCCTGATCTTAC
AGGCAAACCTGGCTATTGGGCCAAGGCTTTGACTGAGAGGTATGCAGAGT
CAAATGCTCTGATTCACTACTACTTCACCTCCAATGGAGATGTTCACTTT
GGGGTGAATGGAGTTGACAAGGGGTTGTTCTTCAGTGGAGTTGACACCAG
GCAACCCCTCTGGTGTATGATAGATCTCTATGGTAACTGCACTGCTATTG
AAATGGTGGATATGCGAAGGAGCCTCAACAACTTTGCAGGAGAGTCCTCA
CAACAAGAATAGTCAACCACCTTTGAAGTTCAACAACAAGCATGGTGACA
ACTGCCAGATTTTGAGAGATGGGAGCCAAGCAAAGAGGGGAGAAAGCTTC
TGTAAGGGAGTTGTGTTCAGTGATCGGCCAGTTGAGATTGGGGAGAGGGT
TTGCATCAGGTTGACCGAGCTGTCAATAAGATGGTCTGGTGTACTCAGAC
TTGGGTTCAGCTCGCACAACCCCGTCTCCATACAAAATTTGCCCAAATAT
GCCTGTCCTGATCTTACAGGCAAACCTGGCTATTGGGCCAAGGCTTTGAC
TGAGAGGTATGCAGAGTCAAATGCTCTGATTCACTACTACTTCACCTCCA
ATGGAGATGTTCACTTTGGGGTGAATGGAGTTGACAAGGGGTTGTTCTTC
AGTGGAGTTGACACCAGGCAACCCCTCTGGTGTATGATAGATCTCTATGG
TAACTGCACTGCTATTGAAATGGTGGATATGCGAAGGAGCCTCAACAACT
TTGCAGGAGAGTCCTCACAACAAGAA
back to top