mRNA_F-distichus_contig100254.30.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 5.420e-18 Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 4 EADRDALIALYRATGGDAWVEKQGWRTNAPLSEWYGVSVNE-GRVVKLRLTGNNLRGE 174
+ DRDAL+ALYRATGG+ W E Q W T+A L W+GV VN+ GRVVKL+L NNL GE
Sbjct: 3 QTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGE 60
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 2.500e-16 Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 4 EADRDALIALYRATGGDAWVEKQGWRTNAPLSEWYGVSVNE-GRVVKLRLTGNNLRGE 174
+ DRDAL+ LYRATGG+ W E+Q W T+A L W+GV VN+ GRVVKL+L NNL GE
Sbjct: 3 QTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGE 60
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Match: A0A6H5K3C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C2_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 3.210e-16 Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 4 EADRDALIALYRATGGDAWVEKQGWRTNAPLSEWYGVSVNE-GRVVKLRLTGNNLRG 171
+ DRDAL+A+YRATGG+ W Q W T++ L W+GV+VN+ GRVVKL L NNL G
Sbjct: 3 QTDRDALVAMYRATGGEKWSTSQNWDTDSDLKTWHGVNVNDQGRVVKLELGFNNLEG 59
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 5.610e-16 Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 1 MEADRDALIALYRATGGDAWVEKQGWRTNAPLSEWYGVSVNE-GRVVKLRLTGNNLRG 171
M DR AL+AL+ ATGG W + W T+APL +WYGV VN+ GRVVKL L NNL+G
Sbjct: 9 MSTDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKG 66
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Match: A0A6L7VX36_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7VX36_9GAMM) HSP 1 Score: 79.0 bits (193), Expect = 1.180e-15 Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 10 DRDALIALYRATGGDAWVEKQGWRTNAPLSEWYGVSVNEGRVVKLRLTGNNLRGE 174
DR+AL A+Y ATGGD W +GW T APL +WYG+ +N GRV+ L L NNL GE
Sbjct: 66 DREALEAIYHATGGDEWKHNEGWLTKAPLEDWYGLRLNNGRVIYLELNDNNLTGE 120
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 2.960e-15 Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 4 EADRDALIALYRATGGDAWVEKQGWRTNAPLSEWYGVSVN-EGRVVKLRLTGNNLRG 171
+ DR+AL+ALY ATGG W K+ W T A LS+WYGV V+ +GRVV L L GNNL+G
Sbjct: 98 QPDREALVALYNATGGAKWENKRNWNTRAALSQWYGVEVDSQGRVVTLSLAGNNLQG 154
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Match: A0A6L7VUL4_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7VUL4_9GAMM) HSP 1 Score: 76.3 bits (186), Expect = 9.110e-15 Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 10 DRDALIALYRATGGDAWVEKQGWRTNAPLSEWYGVSVNEGRVVKLRLTGNNLRGE 174
DR+AL A Y ATGGD W GW T+APL +WYG+ V+ GRV L L NNL+GE
Sbjct: 53 DREALEAFYHATGGDEWKNNDGWLTDAPLKDWYGIGVSRGRVFFLGLEDNNLKGE 107
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Match: A0A6H5KCH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCH6_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.170e-14 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 10 DRDALIALYRATGGDAWVEKQGWRTNAPLSEWYGVSVNE-GRVVKLRLTGNNLRG 171
DR+ALI L+R+ GG W + W T+ L+ WYGV VN+ GRVVKLR+ NNLRG
Sbjct: 5 DREALITLFRSAGGARWFRRNNWLTSDGLATWYGVEVNDQGRVVKLRVDANNLRG 59
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Match: A0A352FEI0_9BACT (Uncharacterized protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A352FEI0_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 1.200e-14 Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 4 EADRDALIALYRATGGDAWVEKQGWR-TNAPLSEWYGVSVNEGRVVKLRLTGNNLRG 171
+ADRDAL+ALY ATGG AW W T A + WYGV+V G+V K++LT NNL G
Sbjct: 36 QADRDALMALYNATGGPAWTNHTNWGGTAATVGTWYGVTVTSGKVTKVKLTANNLTG 92
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 1.230e-14 Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 4 EADRDALIALYRATGGDAWVEKQGWRTNAPLSEWYGVSVN-EGRVVKLRLTGNNLRG 171
+ DR AL+ALY ATGG W Q W T+A LS+W+GV VN +GRVVKL L NNLRG
Sbjct: 73 QTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRG 129 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100254.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig100254.30.1 >prot_F-distichus_contig100254.30.1 ID=prot_F-distichus_contig100254.30.1|Name=mRNA_F-distichus_contig100254.30.1|organism=Fucus distichus monoicous|type=polypeptide|length=63bp MEADRDALIALYRATGGDAWVEKQGWRTNAPLSEWYGVSVNEGRVVKLRLback to top mRNA from alignment at F-distichus_contig100254:358..546+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig100254.30.1 ID=mRNA_F-distichus_contig100254.30.1|Name=mRNA_F-distichus_contig100254.30.1|organism=Fucus distichus monoicous|type=mRNA|length=189bp|location=Sequence derived from alignment at F-distichus_contig100254:358..546+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig100254:358..546+ >mRNA_F-distichus_contig100254.30.1 ID=mRNA_F-distichus_contig100254.30.1|Name=mRNA_F-distichus_contig100254.30.1|organism=Fucus distichus monoicous|type=CDS|length=378bp|location=Sequence derived from alignment at F-distichus_contig100254:358..546+ (Fucus distichus monoicous)back to top |