mRNA_F-distichus_contig100087.13.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Match: H8GL66_METAL (Methionyl-tRNA formyltransferase n=1 Tax=Methylomicrobium album BG8 TaxID=686340 RepID=H8GL66_METAL) HSP 1 Score: 55.8 bits (133), Expect = 8.150e-8 Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 1 HLLVGSSPEWGVTVLQADKEMDAGDVWESINFSVPLSRTLSKSAFYN 141
H+++ + EWGVT+LQAD EMDAGD+W S NF +R +KS+ YN
Sbjct: 89 HMIMRNDAEWGVTLLQADDEMDAGDIWTSHNFQ---TRWTTKSSIYN 132
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Match: A0A8J9ZBU4_BRALA (ALDH1L2 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZBU4_BRALA) HSP 1 Score: 55.1 bits (131), Expect = 1.520e-7 Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 7 LVGSSPEWGVTVLQADKEMDAGDVWESINFSVPLSRTLSKSAFYN 141
L G + EWGVTVLQAD EMDAGD+W + F P++R +KS+ Y+
Sbjct: 188 LKGGATEWGVTVLQADDEMDAGDIWATCKF--PVNRKAAKSSLYS 230
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Match: UPI0018F4B4D5 (hydrogenase maturation protein n=1 Tax=Paenibacillus sp. YIM B00362 TaxID=2799335 RepID=UPI0018F4B4D5) HSP 1 Score: 54.3 bits (129), Expect = 2.850e-7 Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 1
Query: 7 LVGSSPEWGVTVLQADKEMDAGDVWESINFSVPLSRTLSKSAFY 138
++ + EWGVTVLQA +EMDAGD+W S+NFS+ R SKS Y
Sbjct: 90 ILNGAEEWGVTVLQASEEMDAGDIWASVNFSM---RNASKSNLY 130
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Match: A0A2G2K3H6_9FLAO (Hydrogenase maturation protein n=1 Tax=Kordia sp. TaxID=1965332 RepID=A0A2G2K3H6_9FLAO) HSP 1 Score: 53.9 bits (128), Expect = 3.900e-7 Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 1
Query: 7 LVGSSPEWGVTVLQADKEMDAGDVWESINFSVPLSRTLSKSAFY 138
++ EWGVTVLQAD+EMDAGD+W S NF + R++SKS Y
Sbjct: 90 VMSQKTEWGVTVLQADEEMDAGDIWSSNNFEM---RSISKSNLY 130
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Match: A0A8H3WWJ3_GIGMA (Methylenetetrahydrofolate dehydrogenase NADP+/methenyltetrahydrofolate cyclohydrolase (Fragment) n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H3WWJ3_GIGMA) HSP 1 Score: 53.5 bits (127), Expect = 5.330e-7 Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 7 LVGSSPEWGVTVLQADKEMDAGDVWESINFSVPLSRTLSKSAFYN 141
++ EWGVT+L+ADKEMDAG +W S NF VP + ++K+ YN
Sbjct: 428 IIDKKDEWGVTILEADKEMDAGAIWASENFXVP--KAITKTHLYN 470
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Match: A0A2E3SNW9_9BACT (Hydrogenase maturation protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2E3SNW9_9BACT) HSP 1 Score: 53.5 bits (127), Expect = 5.330e-7 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 1
Query: 25 EWGVTVLQADKEMDAGDVWESINFSVPLSRTLSKSAFY 138
EWGVTVLQAD+EMDAGD+W S NF + R +SKS Y
Sbjct: 96 EWGVTVLQADEEMDAGDIWSSHNFQM---RPISKSCLY 130
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Match: UPI001CFDD686 (enoyl-CoA hydratase-related protein n=1 Tax=Microseira wollei TaxID=467598 RepID=UPI001CFDD686) HSP 1 Score: 53.5 bits (127), Expect = 5.330e-7 Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 25 EWGVTVLQADKEMDAGDVWESINFSVPLSRTLSKSAFYN 141
EWGVT+LQAD+EMDAGD+W S F + RT SKS+ YN
Sbjct: 97 EWGVTLLQADEEMDAGDIWSSKTFPM---RTASKSSIYN 132
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Match: A0A0F7JUS0_9GAMM (Hydrogenase maturation protein n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A0F7JUS0_9GAMM) HSP 1 Score: 53.5 bits (127), Expect = 5.330e-7 Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 7 LVGSSPEWGVTVLQADKEMDAGDVWESINFSVPLSRTLSKSAFY 138
++ PEWGVTVLQA+ EMDAGD+W ++NF + R +SK++ Y
Sbjct: 90 ILRGEPEWGVTVLQANAEMDAGDIWATVNFPM---RAVSKASLY 130
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Match: UPI001F03DE96 (hydrogenase maturation protein n=1 Tax=Streptomyces sp. MUM 203J TaxID=2791990 RepID=UPI001F03DE96) HSP 1 Score: 53.5 bits (127), Expect = 5.330e-7 Identity = 24/35 (68.57%), Postives = 26/35 (74.29%), Query Frame = 1
Query: 1 HLLVGSSPEWGVTVLQADKEMDAGDVWESINFSVP 105
H L + EWGVTVLQAD+EMDAGDVW S F VP
Sbjct: 88 HALHEGADEWGVTVLQADEEMDAGDVWASAGFRVP 122
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Match: A0A397URI6_9GLOM (Tetrahydrofolate dehydrogenase/cyclohydrolase n=4 Tax=Gigaspora TaxID=4873 RepID=A0A397URI6_9GLOM) HSP 1 Score: 53.5 bits (127), Expect = 5.340e-7 Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 7 LVGSSPEWGVTVLQADKEMDAGDVWESINFSVPLSRTLSKSAFYN 141
++ EWGVTVL+ADKEMDAG +W S NF VP + ++K+ YN
Sbjct: 435 IIDKKDEWGVTVLEADKEMDAGAIWASENFLVP--KAITKTHLYN 477 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100087.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig100087.13.1 >prot_F-distichus_contig100087.13.1 ID=prot_F-distichus_contig100087.13.1|Name=mRNA_F-distichus_contig100087.13.1|organism=Fucus distichus monoicous|type=polypeptide|length=47bp HLLVGSSPEWGVTVLQADKEMDAGDVWESINFSVPLSRTLSKSAFYNback to top mRNA from alignment at F-distichus_contig100087:1736..1876- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig100087.13.1 ID=mRNA_F-distichus_contig100087.13.1|Name=mRNA_F-distichus_contig100087.13.1|organism=Fucus distichus monoicous|type=mRNA|length=141bp|location=Sequence derived from alignment at F-distichus_contig100087:1736..1876- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig100087:1736..1876- >mRNA_F-distichus_contig100087.13.1 ID=mRNA_F-distichus_contig100087.13.1|Name=mRNA_F-distichus_contig100087.13.1|organism=Fucus distichus monoicous|type=CDS|length=282bp|location=Sequence derived from alignment at F-distichus_contig100087:1736..1876- (Fucus distichus monoicous)back to top |