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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft1205_5 |
| Protein domains | PF14223 |
| Protein domains | IPR001878 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 309 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0003676 |
| GO | 0008270 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1205_5a-0001 ID=EsuBft1205_5a-0001|Name=EsuBft1205_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3092bp|location=Sequence derived from alignment at Scaffold_210:132942..136033- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
AGCTACCGCACCCAAACACAATATATTATAAGGCCTGGTGTTGGTGGTGG GTATTGGCGTCTGAGCGGTGGGAGCTGGGCCATCGGGGCAGCGGACACCA TTTTCATAGCTGGGATCGCGGCCGAAGGGGGCGAGGACAGCAGTGCATAG CTGGTGCGGTGGCCATTGCGGGGACCGGGACAGCAGGGTTTATAGCTGGG ACAGCACTTCGAGGCTGGGACAGCAGGGAGGGTTTAGAGTTTTAGTTTGA TATGTCTGGAACGGAGGAGGACGCAACTCTGAGCGCGAGGTTGGATGAGG CGCTACGAGCTATAGAGGAGGCCAAGGCTGAGACGGAGGAGCTTAGGGCA GACAGCGGCGGTCTGCGGGTGCACCTGCCGGCAGTAGCTCAGGAGGCAAC GGTCTAGTTGCTCCTGGAGGGGCTTCATCTGCACCGGTGAGGCCAATGTG GCCAGGCGGGGTGAGTCATGATGGCGGTACTGGGGTGCCGGGCTTGCCTC TGGGAGGTACAATTGTCAGAACTCCTGTGCCTAGAATCCCGCCTAATTGC ACCGCCGACACCTTACTCAGTTGGCGGAGACGCTTTCTGGCCTACATGGA CAACCATGATCTCCAGCACACAATCTTCGGCAGTGCTGAGGTTCCCGTTG TCAGTTGTCAGGATGAAGGATACTTGACACGCCAGTATGGTGCACAGCTG GTTGTTGAGCACAAGAGGACATGGAGTTTTATCTTGGAGGCAGCGGTGGG GGCCCCATTTGAGAACAACCTGTACTCTTGCCATTCCGTGGCAGAGGCGT GGAGGATGATGGAGGATTGGTATTTGCCGAACCACCCAGCTGATTGTCAG CTCCTCGTCGCCGAGCTAGATAATATAACCATGAGTGATGATGAGGACCC CAAGCTTTTCTTCTCGCGCGTCGCACAACTGGAGACCAAGTTACGGGCTG TGGGCATTGCTAAGAGTGACCAGGAAGTTGTGCAGATCCTTGTGCGCCAA CTCCCCGCACGCTACGATGTCGAGAAGCGCACTAGTCTTTCCAAGCGTGA TTTAACCCGCGCTGAGTTGCAGGACGTCGTGCGTGGTCGATATGCCACGC TCAAGGCCAGCGAGATGAGGGAGCGAGGGTCGGCAGCTTTGACGCCGGCG GTTTCTGTCAACCCCCATGCTCTTGTTGTGGGCCGTGGTTTTGGACACGG CGGCAACGGGGGGAGCGGGGGGGGCGGAGGCCAACGGCGGAATGGCAACA ACTGCGACGGCCGCGGGCAACACTGGTCCTCTGGGGGCGGTGTTGTCCAA CAGCAACAGCCGCAGTTGCAGGTGCAGCAATACCGGCAGCCGCAACAGCC GCAGCGACACATGCAACAGCCGAACCAACAGCCGCAGCGGCAGGTGCAAC AGTCGTACCCACAGCCGCAGCAGCAGATGCGACAGCAGCAGCCGTATCAA CAGCAGTCGCAGATGCAGCCGTACCGGCAGTCGCAGCAGCAGCCGCAGCA GCAGCGGCAGCTGCAACAGCCCGCTTTGAACGGTGTTGGTGGCATCTACG ATTGCGGTAGTAATGCCGTGTATCATCAGCCGGAATCACTACCTCCACCT GGAGCGCCGATGGGCACAGTGCACAGATGCGGCCGCTGTGGAAGGAACGA TCACCACGCCATAGATTGCGCCGCCCCCCGCAGGTTCGAGGGCACGTGCG GTGCATGCGGCCAGTACGGTCACATGTGGCGCAACTGTGCCAAGAGCAAC CGGCACCCCCACCTCAACGTCGTCACTTCTGCTGGTGCCCTCGGTCCGGA GTACGCGTACACCACCGCGGATACATCGGCCGTCCAATTTCGTGATATCC CGGCGGCCGATGGCGTATACTACAGTGACACCATGCTGACCAGCACTGGT GGCAAAGGCAACGGTGGTACTGGTGCTGGCGGTGGCGGCAGCGGCGGTGA CAATGGCGGTGGTGGCGGTGGAGCGATCGTACAGCAGCAGGTAGTGACAC CGGGCGAGCCCTACTTTGGTTTTGTCGACATTTTCCACGGCAGCGGTGGC GTGGAAGGTGAAAATGGCGGCGGCAGCGGTGGTAGTGACGCGGCGGGAGC GGGCCCTGAGGCGCTTGGCAACGGCGAGGGTACCTTCGGTGGCGGTCTCT TCGCGATGCACCTTGTCTGTTCCGTTACCCCATCCCCCCCCGTGCGCGAA CCATCCGACCTTTTCCCACATCGCCCGGGTTCGACGGTCTTCCTTGGAGA CACCGGCGCCGTAGTCCACGTGGTCGCTTCTGGGGAAAAGGTGTACAACA GGCGCCCGCCGCTCCCGGAGGAGCGACTACTCATGCTTGGCGACGGTAAG CACATCCCGGTAGAGTTTTTCGGTGACTTGGATGTGATCTTCCACTGCCC TGAGGACGTGCGCGTCACCCTGCAGAATGTTGGTGTGGTACCGGGTTTGG CGCTAGATATTCTGTCGCTGAACAAGATCCAGGATCGCCATGAGATCAAG CTTAACCGGCATGGAGCATCGATCTTGGGGGGGCGAGTGCGCATGACAAA ATTCCCTCACGGGAATTACATCCAGGGGACTCGCGTTGATCCACTGCCTC AACGCGACTCACCTCCTCAGCCCCCCGCGATGGTTGCGGCGATGCTACGG TCTGGCACGCAATCCAGCGTCGACTACGATGCTCTTCACTGGTCCCTCAG TCATGCCAATTCCAAAACGCTGTATGAGACTGCCAAGTAGATGGGTATCA AGGTGACCGGTACTCCGGAGTACTGCGATGGATGTGCGGAGTCGAAGGCG ATCCAGCGCTCGGTCCCCAAGGTCATTCCCCCCTCCCGCCGGACGACGCG GCTTCTTGAGCGTGTCGCCATGGACCTAGCCGGTCCGTTCGGCCAATCCA GCGGCGGTGCCAAGTACGTGATGCAGATCCTGTACCACCATACCATCTAC GGATGGATTTGCTTTCTGCGGGAGCACAGCGGTACAAACGTGGTGGCGGA CTTTCGTGCGTGGCATGCCTCCATCAAATTGCTCTTGGCTACTCACGGGG GGCTGGGCTGCGTTCTGACCGACAGCGGCACCGAGTGGGTCA back to topprotein sequence of EsuBft1205_5a-0001 >EsuBft1205_5 ID=EsuBft1205_5|Name=EsuBft1205_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=764bp
MWPGGVSHDGGTGVPGLPLGGTIVRTPVPRIPPNCTADTLLSWRRRFLAY MDNHDLQHTIFGSAEVPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAA VGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDE DPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSK RDLTRAELQDVVRGRYATLKASEMRERGSAALTPAVSVNPHALVVGRGFG HGGNGGSGGGGGQRRNGNNCDGRGQHWSSGGGVVQQQQPQLQVQQYRQPQ QPQRHMQQPNQQPQRQVQQSYPQPQQQMRQQQPYQQQSQMQPYRQSQQQP QQQRQLQQPALNGVGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCGR NDHHAIDCAAPRRFEGTCGACGQYGHMWRNCAKSNRHPHLNVVTSAGALG PEYAYTTADTSAVQFRDIPAADGVYYSDTMLTSTGGKGNGGTGAGGGGSG GDNGGGGGGAIVQQQVVTPGEPYFGFVDIFHGSGGVEGENGGGSGGSDAA GAGPEALGNGEGTFGGGLFAMHLVCSVTPSPPVREPSDLFPHRPGSTVFL GDTGAVVHVVASGEKVYNRRPPLPEERLLMLGDGKHIPVEFFGDLDVIFH CPEDVRVTLQNVGVVPGLALDILSLNKIQDRHEIKLNRHGASILGGRVRM TKFPHGNYIQGTRVDPLPQRDSPPQPPAMVAAMLRSGTQSSVDYDALHWS LSHANSKTLYETAK back to topmRNA from alignment at Scaffold_210:132942..136033- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1205_5a-0001 ID=EsuBft1205_5a-0001|Name=EsuBft1205_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3092bp|location=Sequence derived from alignment at Scaffold_210:132942..136033- (Ectocarpus subulatus male Bft15b) AGCTACCGCACCCAAACACAATATATTATAAGGCCTGGTGTTGGTGGTGG
GTATTGGCGTCTGAGCGGTGGGAGCTGGGCCATCGGGGCAGCGGACACCA
TTTTCATAGCTGGGATCGCGGCCGAAGGGGGCGAGGACAGCAGTGCATAG
CTGGTGCGGTGGCCATTGCGGGGACCGGGACAGCAGGGTTTATAGCTGGG
ACAGCACTTCGAGGCTGGGACAGCAGGGAGGGTTTAGAGTTTTAGTTTGA
TATGTCTGGAACGGAGGAGGACGCAACTCTGAGCGCGAGGTTGGATGAGG
CGCTACGAGCTATAGAGGAGGCCAAGGCTGAGACGGAGGAGCTTAGGGCA
GACAGCGGCGGTCTGCGGGTGCACCTGCCGGCAGTAGCTCAGGAGGCAAC
GGTCTAGTTGCTCCTGGAGGGGCTTCATCTGCACCGGTGAGGCCAATGTG
GCCAGGCGGGGTGAGTCATGATGGCGGTACTGGGGTGCCGGGCTTGCCTC
TGGGAGGTACAATTGTCAGAACTCCTGTGCCTAGAATCCCGCCTAATTGC
ACCGCCGACACCTTACTCAGTTGGCGGAGACGCTTTCTGGCCTACATGGA
CAACCATGATCTCCAGCACACAATCTTCGGCAGTGCTGAGGTTCCCGTTG
TCAGTTGTCAGGATGAAGGATACTTGACACGCCAGTATGGTGCACAGCTG
GTTGTTGAGCACAAGAGGACATGGAGTTTTATCTTGGAGGCAGCGGTGGG
GGCCCCATTTGAGAACAACCTGTACTCTTGCCATTCCGTGGCAGAGGCGT
GGAGGATGATGGAGGATTGGTATTTGCCGAACCACCCAGCTGATTGTCAG
CTCCTCGTCGCCGAGCTAGATAATATAACCATGAGTGATGATGAGGACCC
CAAGCTTTTCTTCTCGCGCGTCGCACAACTGGAGACCAAGTTACGGGCTG
TGGGCATTGCTAAGAGTGACCAGGAAGTTGTGCAGATCCTTGTGCGCCAA
CTCCCCGCACGCTACGATGTCGAGAAGCGCACTAGTCTTTCCAAGCGTGA
TTTAACCCGCGCTGAGTTGCAGGACGTCGTGCGTGGTCGATATGCCACGC
TCAAGGCCAGCGAGATGAGGGAGCGAGGGTCGGCAGCTTTGACGCCGGCG
GTTTCTGTCAACCCCCATGCTCTTGTTGTGGGCCGTGGTTTTGGACACGG
CGGCAACGGGGGGAGCGGGGGGGGCGGAGGCCAACGGCGGAATGGCAACA
ACTGCGACGGCCGCGGGCAACACTGGTCCTCTGGGGGCGGTGTTGTCCAA
CAGCAACAGCCGCAGTTGCAGGTGCAGCAATACCGGCAGCCGCAACAGCC
GCAGCGACACATGCAACAGCCGAACCAACAGCCGCAGCGGCAGGTGCAAC
AGTCGTACCCACAGCCGCAGCAGCAGATGCGACAGCAGCAGCCGTATCAA
CAGCAGTCGCAGATGCAGCCGTACCGGCAGTCGCAGCAGCAGCCGCAGCA
GCAGCGGCAGCTGCAACAGCCCGCTTTGAACGGTGTTGGTGGCATCTACG
ATTGCGGTAGTAATGCCGTGTATCATCAGCCGGAATCACTACCTCCACCT
GGAGCGCCGATGGGCACAGTGCACAGATGCGGCCGCTGTGGAAGGAACGA
TCACCACGCCATAGATTGCGCCGCCCCCCGCAGGTTCGAGGGCACGTGCG
GTGCATGCGGCCAGTACGGTCACATGTGGCGCAACTGTGCCAAGAGCAAC
CGGCACCCCCACCTCAACGTCGTCACTTCTGCTGGTGCCCTCGGTCCGGA
GTACGCGTACACCACCGCGGATACATCGGCCGTCCAATTTCGTGATATCC
CGGCGGCCGATGGCGTATACTACAGTGACACCATGCTGACCAGCACTGGT
GGCAAAGGCAACGGTGGTACTGGTGCTGGCGGTGGCGGCAGCGGCGGTGA
CAATGGCGGTGGTGGCGGTGGAGCGATCGTACAGCAGCAGGTAGTGACAC
CGGGCGAGCCCTACTTTGGTTTTGTCGACATTTTCCACGGCAGCGGTGGC
GTGGAAGGTGAAAATGGCGGCGGCAGCGGTGGTAGTGACGCGGCGGGAGC
GGGCCCTGAGGCGCTTGGCAACGGCGAGGGTACCTTCGGTGGCGGTCTCT
TCGCGATGCACCTTGTCTGTTCCGTTACCCCATCCCCCCCCGTGCGCGAA
CCATCCGACCTTTTCCCACATCGCCCGGGTTCGACGGTCTTCCTTGGAGA
CACCGGCGCCGTAGTCCACGTGGTCGCTTCTGGGGAAAAGGTGTACAACA
GGCGCCCGCCGCTCCCGGAGGAGCGACTACTCATGCTTGGCGACGGTAAG
CACATCCCGGTAGAGTTTTTCGGTGACTTGGATGTGATCTTCCACTGCCC
TGAGGACGTGCGCGTCACCCTGCAGAATGTTGGTGTGGTACCGGGTTTGG
CGCTAGATATTCTGTCGCTGAACAAGATCCAGGATCGCCATGAGATCAAG
CTTAACCGGCATGGAGCATCGATCTTGGGGGGGCGAGTGCGCATGACAAA
ATTCCCTCACGGGAATTACATCCAGGGGACTCGCGTTGATCCACTGCCTC
AACGCGACTCACCTCCTCAGCCCCCCGCGATGGTTGCGGCGATGCTACGG
TCTGGCACGCAATCCAGCGTCGACTACGATGCTCTTCACTGGTCCCTCAG
TCATGCCAATTCCAAAACGCTGTATGAGACTGCCAAGTAGATGGGTATCA
AGGTGACCGGTACTCCGGAGTACTGCGATGGATGTGCGGAGTCGAAGGCG
ATCCAGCGCTCGGTCCCCAAGGTCATTCCCCCCTCCCGCCGGACGACGCG
GCTTCTTGAGCGTGTCGCCATGGACCTAGCCGGTCCGTTCGGCCAATCCA
GCGGCGGTGCCAAGTACGTGATGCAGATCCTGTACCACCATACCATCTAC
GGATGGATTTGCTTTCTGCGGGAGCACAGCGGTACAAACGTGGTGGCGGA
CTTTCGTGCGTGGCATGCCTCCATCAAATTGCTCTTGGCTACTCACGGGG
GGCTGGGCTGCGTTCTGACCGACAGCGGCACCGAGTGGGTCA back to topCoding sequence (CDS) from alignment at Scaffold_210:132942..136033- >EsuBft1205_5a-0001 ID=EsuBft1205_5a-0001|Name=EsuBft1205_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2295bp|location=Sequence derived from alignment at Scaffold_210:132942..136033- (Ectocarpus subulatus male Bft15b) ATGTGGCCAGGCGGGGTGAGTCATGATGGCGGTACTGGGGTGCCGGGCTT GCCTCTGGGAGGTACAATTGTCAGAACTCCTGTGCCTAGAATCCCGCCTA ATTGCACCGCCGACACCTTACTCAGTTGGCGGAGACGCTTTCTGGCCTAC ATGGACAACCATGATCTCCAGCACACAATCTTCGGCAGTGCTGAGGTTCC CGTTGTCAGTTGTCAGGATGAAGGATACTTGACACGCCAGTATGGTGCAC AGCTGGTTGTTGAGCACAAGAGGACATGGAGTTTTATCTTGGAGGCAGCG GTGGGGGCCCCATTTGAGAACAACCTGTACTCTTGCCATTCCGTGGCAGA GGCGTGGAGGATGATGGAGGATTGGTATTTGCCGAACCACCCAGCTGATT GTCAGCTCCTCGTCGCCGAGCTAGATAATATAACCATGAGTGATGATGAG GACCCCAAGCTTTTCTTCTCGCGCGTCGCACAACTGGAGACCAAGTTACG GGCTGTGGGCATTGCTAAGAGTGACCAGGAAGTTGTGCAGATCCTTGTGC GCCAACTCCCCGCACGCTACGATGTCGAGAAGCGCACTAGTCTTTCCAAG CGTGATTTAACCCGCGCTGAGTTGCAGGACGTCGTGCGTGGTCGATATGC CACGCTCAAGGCCAGCGAGATGAGGGAGCGAGGGTCGGCAGCTTTGACGC CGGCGGTTTCTGTCAACCCCCATGCTCTTGTTGTGGGCCGTGGTTTTGGA CACGGCGGCAACGGGGGGAGCGGGGGGGGCGGAGGCCAACGGCGGAATGG CAACAACTGCGACGGCCGCGGGCAACACTGGTCCTCTGGGGGCGGTGTTG TCCAACAGCAACAGCCGCAGTTGCAGGTGCAGCAATACCGGCAGCCGCAA CAGCCGCAGCGACACATGCAACAGCCGAACCAACAGCCGCAGCGGCAGGT GCAACAGTCGTACCCACAGCCGCAGCAGCAGATGCGACAGCAGCAGCCGT ATCAACAGCAGTCGCAGATGCAGCCGTACCGGCAGTCGCAGCAGCAGCCG CAGCAGCAGCGGCAGCTGCAACAGCCCGCTTTGAACGGTGTTGGTGGCAT CTACGATTGCGGTAGTAATGCCGTGTATCATCAGCCGGAATCACTACCTC CACCTGGAGCGCCGATGGGCACAGTGCACAGATGCGGCCGCTGTGGAAGG AACGATCACCACGCCATAGATTGCGCCGCCCCCCGCAGGTTCGAGGGCAC GTGCGGTGCATGCGGCCAGTACGGTCACATGTGGCGCAACTGTGCCAAGA GCAACCGGCACCCCCACCTCAACGTCGTCACTTCTGCTGGTGCCCTCGGT CCGGAGTACGCGTACACCACCGCGGATACATCGGCCGTCCAATTTCGTGA TATCCCGGCGGCCGATGGCGTATACTACAGTGACACCATGCTGACCAGCA CTGGTGGCAAAGGCAACGGTGGTACTGGTGCTGGCGGTGGCGGCAGCGGC GGTGACAATGGCGGTGGTGGCGGTGGAGCGATCGTACAGCAGCAGGTAGT GACACCGGGCGAGCCCTACTTTGGTTTTGTCGACATTTTCCACGGCAGCG GTGGCGTGGAAGGTGAAAATGGCGGCGGCAGCGGTGGTAGTGACGCGGCG GGAGCGGGCCCTGAGGCGCTTGGCAACGGCGAGGGTACCTTCGGTGGCGG TCTCTTCGCGATGCACCTTGTCTGTTCCGTTACCCCATCCCCCCCCGTGC GCGAACCATCCGACCTTTTCCCACATCGCCCGGGTTCGACGGTCTTCCTT GGAGACACCGGCGCCGTAGTCCACGTGGTCGCTTCTGGGGAAAAGGTGTA CAACAGGCGCCCGCCGCTCCCGGAGGAGCGACTACTCATGCTTGGCGACG GTAAGCACATCCCGGTAGAGTTTTTCGGTGACTTGGATGTGATCTTCCAC TGCCCTGAGGACGTGCGCGTCACCCTGCAGAATGTTGGTGTGGTACCGGG TTTGGCGCTAGATATTCTGTCGCTGAACAAGATCCAGGATCGCCATGAGA TCAAGCTTAACCGGCATGGAGCATCGATCTTGGGGGGGCGAGTGCGCATG ACAAAATTCCCTCACGGGAATTACATCCAGGGGACTCGCGTTGATCCACT GCCTCAACGCGACTCACCTCCTCAGCCCCCCGCGATGGTTGCGGCGATGC TACGGTCTGGCACGCAATCCAGCGTCGACTACGATGCTCTTCACTGGTCC CTCAGTCATGCCAATTCCAAAACGCTGTATGAGACTGCCAAGTAG back to top
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