|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7FWV2 |
| ProteomeId | EsuBft741_8 |
| Protein domains | IPR002035 |
| Protein domains | PTHR14187 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | alpha-protein kinase vwka os:dictyostelium discoideum gn:vwka pe:1 sv:1 [Automatic annotation] |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 2893 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.43e-212 |
| EggNOG OGs | 2DNG0@1|root,2S673@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | von Willebrand factor (vWF) type A domain |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft741_8a-0001 ID=EsuBft741_8a-0001|Name=EsuBft741_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2893bp|location=Sequence derived from alignment at Scaffold_195:769600..774239+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCGTCGGGTTGCTTTGACCGTCACGGCTGTTGATGACTGGGGGGGCGA CACACGGGAGGCGATGATTGAGCTCGGGCACGAACTATTGACTAAATACG TGGTGTCCGTATCTGAGTGTTCTTTGGCGGTCGGCGATCGCTTCCACAAA TTCATGCGAGCAGAACACTCCGCCAAAGGCGCTGCTACCCCAGCAGTGAG TCCAAGTCATTTGATAACGGTGTCAATTCTCTCGCACGCCTTTATTTTCG CGCGTGTATGCGTGGTGCAGGCGCCAGGGACTTGGATGGTCAACGACGTG TCCTCCCGCGAGGTTGAGGAGCTGATGGATGCCTTCGAGCAAATGACCAC GGTCGTAAAGTTCGCCAACACGACCCTGGCCACAGAGAACATCGCCGAGG CGCAGCGCATCTACGCGGGGGCTATGGCCCTATTCAGGAAGCTGGGGAAC GACCGCGGCGTCAGCATCATGAACAACAACCTGGGCAACGTGTACGCTCT GCAGGCCGGACAGTTCGTCGCCAAGGCAAGGGACGATGTAAATCCGGCCC AAACCAAGGCCCTCATGGAGGCGGCGCAGGACAGTGTCGCCGACGCCGTC ACAAACCACGAGCTCGCCATTAACGACGCCGAGGTGCTTTGCGCAGCCAC CAACCAGCAACCGAACCACGCTTCACCGCTGCTCCGCAGCGCTCACCGCG GCGGTCGTGAGGGTGTGGATGAGACCGAGTGCGAGGAAGGCGTCAAGAGT GAAGGTGCCGCACTCGCGGATGCCGACGTAAACGACGACGACGACGAGGA GGACGACAACAAGTCACACGCCGCCCTTTGCCAGCAGCTCGTTAACCGCA AGTTTATTCTCGCTCTGTGCCTCACAGCTAAGGGCAACAGCACCGTCGCC ACCGGGGGACAACCAGACCTGAAAACCATCGACGAGGCCAGGAACCTGAT GCAGCAGTGCATCCTGCTGACCCACGTCGGGCAACACAACGGCGGAAAGC GGAACAACGGCGACGCGAAGACCGACCTGCGGCGTATCGGGTACCTCCTC CAATTGTCCGCCCTGGAGCGAGAGCAGCAAGATAGATCTAGGGAGGCAGG AGAAGCACTTGATGCGGCCGAGCTGGTGATTGCGCCCTATGAGAGCTTTC ACTTTGCCGGGGGGCTGGGGGCGGCGATGGCGACGCCGCTGGAAACACCA GTGCGGATCCTCCGCCAGAGGCTGTTGGAAGCGCGCGCCGCCCACTGCGT AGCAAGCGGCTTCCACGCGGCGGCAATCGATCACTACACTCAAGCCATCA TTGGGACGGGAGACCTGATTGACCCCAGCGTTGCCCGGGCATCGCTCTTG GGGCTCCGCAGTCTGGCCTCTGACGGCAACTACGGCCGCCTCTCCCGAGC TATTGGTAGCGTTGGGCTTGCATCCTGGCGCGGGCGCGGACCCCGAGGGC ATATCCTCGGCGATCGACCACGGTATCGTGATTTCGGAGACAGCGTGCAG TACGAGTCGTTCGACTTCCACAAGGAATATGATCTTCACAAGCTTACCAA AAAGCTCGAGAAAATCAAGGCCTACGGAGGCCAAGACTTCCCGGAGGACG TTGCTGGAGGGTTGAAGCTCGCGACGGAGCTTGTCTGGAGGGGCAACATC CGCCTTTGCATCCTCCTCGCCGACGCGCCGTGTCACGGTAACGTGCACCA CACCGGGGCTGGGGATATGTTCCCGAACTGCTGTCCCATGGGAAACGATC CAGCCAAGCTGCTCTACAAGTTGCAGGTGTGAGCGTGTTTGACGGTGCGA AGGGGTGGTGGATCCCACCGCAGTATGGAGAGAATCTGCGTAAAAGCAGT CGCCAGATTTGACGCTGCCTCTGTGAGCGCCGCCTCGTTGGTACGAGCAC GTGCACACTCGGTTGCACGTCTCTCGAGATCCAGGTGTGTGCATGCAGCC ATGTACAGAGCTGAATCCGTTAGGTACCGCTCACTCCGATTCACCGCCGG CCATACATGCAAGCAACGACGACAGAGGTCAGGAAAACCAGTTTTCATCA AAGCTATCAAAGCACTGCTGTACCCCACGATATCACAGTCTGCCCTCACT TTTTCTCGTGACCAACGCCGTGCCAACTGTGACCAACCATTTCCCTTCCC CGTCCCCCCCGGTGTTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGAAGC GACGTTGTAAAACAAGCCAATTCGCTTCGTGAACTCGGCAACCAGGTTAC CGTTGTTTTTTTTACATTTTTTTTTTTCGGCGGTAACCATAATGGTGGTC GAGTAGGTCATGTTGTNAAGCGACGTTGTAAAACAAGCCAATTCGCTTCG TGAACTCGGCAACCAGGTTACCGTTTTTTTTTTTATATTTTTTTTTTTCG GCGGTAACCATAATGGTGGTCGAGTAGGTCATGTTGTGCGGGGTGGACAA TCCTCACTCCGCGCAAAGGGGACAATCGCACCACGTTGTGTAAAAATGGT CACGCATCCTCGAGGCAGTTACACAGTGCTCTCAACTGTCTCTGGAAGTG AAAGCACCAGAAAATAAATTAGAAATATACATGCGAAGGTGTACCGATTC AGGAAAAAGTCAATCGACGGATACCCTGCGAATCGGGTCCTCCTTAACAC TCTCCACCCACAGAATTTACCCTCAACTGGGAACCTCTTGTGGCCAGGAT GGGTAATTCGATGGAAGTGTCACAAGGTTCTTTGTAGGATCGATCGACTC CAAGAGGAGTTCTCAGGACTGACACACATTGTGTCCATGGGAAAATATCC AAGTCAGGAGAAAAAGTGTGCACCCAAGACGATTCGAACCAGTATCCAGC TGACGCCATATGCGAAGGTGTACCGATTCAGGTAAAAGTCAAT back to topprotein sequence of EsuBft741_8a-0001 >EsuBft741_8 ID=EsuBft741_8|Name=EsuBft741_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=593bp
MRRVALTVTAVDDWGGDTREAMIELGHELLTKYVVSVSECSLAVGDRFHK FMRAEHSAKGAATPAVSPSHLITVSILSHAFIFARVCVVQAPGTWMVNDV SSREVEELMDAFEQMTTVVKFANTTLATENIAEAQRIYAGAMALFRKLGN DRGVSIMNNNLGNVYALQAGQFVAKARDDVNPAQTKALMEAAQDSVADAV TNHELAINDAEVLCAATNQQPNHASPLLRSAHRGGREGVDETECEEGVKS EGAALADADVNDDDDEEDDNKSHAALCQQLVNRKFILALCLTAKGNSTVA TGGQPDLKTIDEARNLMQQCILLTHVGQHNGGKRNNGDAKTDLRRIGYLL QLSALEREQQDRSREAGEALDAAELVIAPYESFHFAGGLGAAMATPLETP VRILRQRLLEARAAHCVASGFHAAAIDHYTQAIIGTGDLIDPSVARASLL GLRSLASDGNYGRLSRAIGSVGLASWRGRGPRGHILGDRPRYRDFGDSVQ YESFDFHKEYDLHKLTKKLEKIKAYGGQDFPEDVAGGLKLATELVWRGNI RLCILLADAPCHGNVHHTGAGDMFPNCCPMGNDPAKLLYKLQV back to topmRNA from alignment at Scaffold_195:769600..774239+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft741_8a-0001 ID=EsuBft741_8a-0001|Name=EsuBft741_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4640bp|location=Sequence derived from alignment at Scaffold_195:769600..774239+ (Ectocarpus subulatus male Bft15b) ATGCGTCGGGTATAACCCACCATATCGTATCCCGCAATATCCAGTGGTAT
CACATCTTGGCGGGCTTTGCTTGAACGACTTGCCCCCCCCTCCGCTGCTC
CCCCACTCTTTTCTCTTTTTTCTCCAGTCGCGGCGGGCACGGTGCTCAAC
CTCATCCTTCAGGTTGCTTTGACCGTCACGGCTGTTGATGACTGGGGGGG
CGACACACGGGAGGCGATGATTGAGCTCGGGCACGAACTATTGACTAAAT
ACGTGGTGTCCGTATCTGAGTGTTCTTTGGCGGTCGGCGATCGCTTCCAC
AAATTCATGCGAGCAGAACACTCCGCCAAAGGTTGTCTAGTCTCACCGCG
ATGTTCTGAACTTGCCTGCCACTTCTCTCTCTCTCTATCTCTCTTTCTCT
TTATCCTCTCTGTCCTCTCTCTTTTTTCTCCCCTCTTTTCTCATGGGGCA
CCAGGCGAATCTACTCAAGCTTGTGGCAGCGAAAGCCGGGTTTGTGTCTA
AGCACTTCGGCAGGATCGAGGAGAGTCTTTTGCAGCTGCAAGCGTCACAT
GCATGACGCAAGGGTTTCAGAAAGTGTTGCTCCAACACCTACTCACCAGG
ATACACGGTCCCCCAGTTGAGGAACACCATGCACCAGAGACTCACAACTT
GCTGCGACTTGACCTTGAGCAGGCACAGAATATCAATTTTCTCCAGAGAA
CCCCCGTCGCGGTCGGCCGAGGGGCCCCGTTGTATCGTCGCCAATTGCAT
TTGTGCATACACACACCTACTAGTGATGCACGTGCCCACACTATTCTCCC
GGCTCTTACAGGCGCTGCTACCCCAGCAGTGAGTCCAAGTCATTTGATAA
CGGTGTCAATTCTCTCGCACGCCTTTATTTTCGCGCGTGTATGCGTGGTG
CAGGCGCCAGGGACTTGGATGGTCAACGACGTGTCCTCCCGCGAGGTTGA
GGAGCTGATGGATGCCTTCGAGCAAATGACCACGGTCGTAAAGTTCGCCA
ACACGACCCTGGCCACAGAGAACATCGCCGAGGCGCAGCGCATCTACGCG
GGGGCTATGGCCCTATTCAGGAAGCTGGGGAACGACCGCGGCGTCAGCAT
CATGAACAACAACCTGGGCAACGTGTACGCTCTGCAGGCCGGACAGTTCG
TCGCCAAGGCAAGGGACGATGTAAATCCGGCCCAAACCAAGGCCCTCATG
GAGGCGGCGCAGGACAGTGTCGCCGACGCCGTCACAAACCACGAGCTCGC
CATTAACGACGCCGAGGTGCTTTGCGCAGCCACCAACCAGCAACCGAACC
ACGCTTCACCGCTGCTCCGCAGCGCTCACCGCGGCGGTCGTGAGGGTGTG
GATGAGACCGAGTGCGAGGAAGGCGTCAAGAGTGAAGGTGCCGCACTCGC
GGATGCCGACGTAAACGACGACGACGACGAGGAGGACGACAACAAGTCAC
ACGCCGCCCTTTGCCAGCAGCTCGTTAACCGCAAGTTTATTCTCGCTCTG
TGCCTCACAGCTAAGGGCAACAGCACCGTCGCCACCGGGGGACAACCAGA
CCTGAAAACCATCGACGAGGCCAGGAACCTGATGCAGCAGTGCATCCTGC
TGACCCACGTCGGGCAACACAACGGCGGAAAGCGGAACAACGGCGACGCG
AAGACCGACCTGCGGCGTATCGGGTACCTCCTCCAATTGTCCGCCCTGGA
GCGAGAGCAGCAAGATAGATCTAGGGAGGCAGGAGAAGCACTTGATGCGG
CCGAGCTGGTGATTGCGCCCTATGAGAGCTTTCACTTTGCCGGGGGGCTG
GGGGCGGCGATGGCGACGCCGCTGGAAACACCAGTGCGGATCCTCCGCCA
GAGGCTGTTGGAAGCGCGCGCCGCCCACTGCGTAGCAAGCGGCTTCCACG
CGGCGGCAATCGATCACTACACTCAAGCCATCATTGGGACGGGAGACCTG
ATTGACCCCAGCGTTGCCCGGGCATCGCTCTTGGGGCTCCGCAGTCTGGC
CTCTGACGGCAACTACGGCCGCCTCTCCCGAGCTATTGGTAGCGTTGGGC
TTGCATCCTGGCGCGGGCGCGGACCCCGAGGGCATATCCTCGGCGATCGA
CCACGGTCTGGAGAGGAAGAAGCCACCGCGACACCAAAACGCTGTCGTGC
TCGCCGTTGAGGACCGGCAGATCAGATCATAGCGTTGTGGCTGACTGCTG
TACGTTTTTGACCTTGACGGGTGCCCCTCCCCCTCGATGATGCAGCTCTG
GTATCCCGCTGGGGGATAAACGAAACTACGGCGAGCGTTCGCGTGAGTTA
CTCAAAGCTGATCACTACAGAAAAACGACAGAACACGAACCACACCACGT
GCGTCGAACTCAAAACGCCCCAACACCGAGTCGTTTCTTTGACTTGATGT
ACCACGTTGTCCTCCGTGGTGGCTATGCTTCTCAGATGCAAAGATGAATC
GTCCAGGCCAAAACCAAGGTGCTGGGCATCATCGACCAGGCAAGAAAGGA
TGTCACCAATTTCAGCCTGCGAGTTGCCTTCGTTGGGTACATTGTCGATA
CCAACGTGGTTGCGATCATTCAGCACTGTAGCCACGCTGGCCAGCGTGCT
CCTTCTTTCATTCGCTTGTACCTCTGCACCAAGTCGTGTTGATTGTGGCA
GGTAGCTGTTGCGTCGATATTTATGCGCGCATTGATCGACCGACGTCTAC
GGAACATCGTAGAACATCGTCGCGAAACATGAGTGAGTGAACGCCAGAAA
CCGATCCAAGCCGATGAAAACTTCCCGCACCACGTTCCCGTAGTAGCAAG
TTGTGCGTGACCCTGGTTATCTTCCGAAAACTCACCCTCCTCCCCGCAGG
TATCGTGATTTCGGAGACAGCGTGCAGTACGAGTCGTTCGACTTCCACAA
GGAATATGATCTTCACAAGCTTACCAAAAAGCTCGAGAAAATCAAGGCCT
ACGGAGGTGCATGCATGCATTCGCACCACGACTTGTTCGTGCTGAAACAC
ATGTCGTACATGTAGGCTATTCACGTGGTTTTCTTTTTCACACCTAGCCT
GTCCATGGCGGCAGCCACGGCTGCTCCCTTCAGGGATGTTAGGAACACGA
CAGCGTACCATCGTCTTGAGTAAATCGAAGGTCCAACCCCTGTGAGGTCT
TCATTGTATACCAGTGCACGCAATCGCCTTCACCCCGGCCACTGCAATGC
TCCTCGTCTCCGTCGCCTCCCCATTCTTCCCCTCTCCGCCCCGCTTCTTT
CTCTGAACACCTCTCTTGAATGATAATACTTTCCCTGGTTCTAACCCGTC
CCCTCATGTACCGCCGCAATGTCCAGGCCAAGACTTCCCGGAGGACGTTG
CTGGAGGGTTGAAGCTCGCGACGGAGCTTGTCTGGAGGGGCAACATCCGC
CTTTGCATCCTCCTCGCCGACGCGCCGTGTCACGGTAACGTGCACCACAC
CGGGGCTGGGGATATGTTCCCGAACTGCTGTCCCATGGGAAACGATCCAG
CCAAGCTGCTCTACAAGTTGCAGGTGTGAGCGTGTTTGACGGTGCGAAGG
GGTGGTGGATCCCACCGCAGTATGGAGAGAATCTGCGTAAAAGCAGTCGC
CAGATTTGACGCTGCCTCTGTGAGCGCCGCCTCGTTGGTACGAGCACGTG
CACACTCGGTTGCACGTCTCTCGAGATCCAGGTGTGTGCATGCAGCCATG
TACAGAGCTGAATCCGTTAGGTACCGCTCACTCCGATTCACCGCCGGCCA
TACATGCAAGCAACGACGACAGAGGTCAGGAAAACCAGTTTTCATCAAAG
CTATCAAAGCACTGCTGTACCCCACGATATCACAGTCTGCCCTCACTTTT
TCTCGTGACCAACGCCGTGCCAACTGTGACCAACCATTTCCCTTCCCCGT
CCCCCCCGGTGTTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGAAGCGAC
GTTGTAAAACAAGCCAATTCGCTTCGTGAACTCGGCAACCAGGTTACCGT
TGTTTTTTTTACATTTTTTTTTTTCGGCGGTAACCATAATGGTGGTCGAG
TAGGTCATGTTGTNAAGCGACGTTGTAAAACAAGCCAATTCGCTTCGTGA
ACTCGGCAACCAGGTTACCGTTTTTTTTTTTATATTTTTTTTTTTCGGCG
GTAACCATAATGGTGGTCGAGTAGGTCATGTTGTGCGGGGTGGACAATCC
TCACTCCGCGCAAAGGGGACAATCGCACCACGTTGTGTAAAAATGGTCAC
GCATCCTCGAGGCAGTTACACAGTGCTCTCAACTGTCTCTGGAAGTGAAA
GCACCAGAAAATAAATTAGAAATATACATGCGAAGGTGTACCGATTCAGG
AAAAAGTCAATCGACGGATACCCTGCGAATCGGGTCCTCCTTAACACTCT
CCACCCACAGAATTTACCCTCAACTGGGAACCTCTTGTGGCCAGGATGGG
TAATTCGATGGAAGTGTCACAAGGTTCTTTGTAGGATCGATCGACTCCAA
GAGGAGTTCTCAGGACTGACACACATTGTGTCCATGGGAAAATATCCAAG
TCAGGAGAAAAAGTGTGCACCCAAGACGATTCGAACCAGTATCCAGCTGA
CGCCATATGCGAAGGTGTACCGATTCAGGTAAAAGTCAAT back to topCoding sequence (CDS) from alignment at Scaffold_195:769600..774239+ >EsuBft741_8a-0001 ID=EsuBft741_8a-0001|Name=EsuBft741_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1782bp|location=Sequence derived from alignment at Scaffold_195:769600..774239+ (Ectocarpus subulatus male Bft15b) ATGCGTCGGGTTGCTTTGACCGTCACGGCTGTTGATGACTGGGGGGGCGA CACACGGGAGGCGATGATTGAGCTCGGGCACGAACTATTGACTAAATACG TGGTGTCCGTATCTGAGTGTTCTTTGGCGGTCGGCGATCGCTTCCACAAA TTCATGCGAGCAGAACACTCCGCCAAAGGCGCTGCTACCCCAGCAGTGAG TCCAAGTCATTTGATAACGGTGTCAATTCTCTCGCACGCCTTTATTTTCG CGCGTGTATGCGTGGTGCAGGCGCCAGGGACTTGGATGGTCAACGACGTG TCCTCCCGCGAGGTTGAGGAGCTGATGGATGCCTTCGAGCAAATGACCAC GGTCGTAAAGTTCGCCAACACGACCCTGGCCACAGAGAACATCGCCGAGG CGCAGCGCATCTACGCGGGGGCTATGGCCCTATTCAGGAAGCTGGGGAAC GACCGCGGCGTCAGCATCATGAACAACAACCTGGGCAACGTGTACGCTCT GCAGGCCGGACAGTTCGTCGCCAAGGCAAGGGACGATGTAAATCCGGCCC AAACCAAGGCCCTCATGGAGGCGGCGCAGGACAGTGTCGCCGACGCCGTC ACAAACCACGAGCTCGCCATTAACGACGCCGAGGTGCTTTGCGCAGCCAC CAACCAGCAACCGAACCACGCTTCACCGCTGCTCCGCAGCGCTCACCGCG GCGGTCGTGAGGGTGTGGATGAGACCGAGTGCGAGGAAGGCGTCAAGAGT GAAGGTGCCGCACTCGCGGATGCCGACGTAAACGACGACGACGACGAGGA GGACGACAACAAGTCACACGCCGCCCTTTGCCAGCAGCTCGTTAACCGCA AGTTTATTCTCGCTCTGTGCCTCACAGCTAAGGGCAACAGCACCGTCGCC ACCGGGGGACAACCAGACCTGAAAACCATCGACGAGGCCAGGAACCTGAT GCAGCAGTGCATCCTGCTGACCCACGTCGGGCAACACAACGGCGGAAAGC GGAACAACGGCGACGCGAAGACCGACCTGCGGCGTATCGGGTACCTCCTC CAATTGTCCGCCCTGGAGCGAGAGCAGCAAGATAGATCTAGGGAGGCAGG AGAAGCACTTGATGCGGCCGAGCTGGTGATTGCGCCCTATGAGAGCTTTC ACTTTGCCGGGGGGCTGGGGGCGGCGATGGCGACGCCGCTGGAAACACCA GTGCGGATCCTCCGCCAGAGGCTGTTGGAAGCGCGCGCCGCCCACTGCGT AGCAAGCGGCTTCCACGCGGCGGCAATCGATCACTACACTCAAGCCATCA TTGGGACGGGAGACCTGATTGACCCCAGCGTTGCCCGGGCATCGCTCTTG GGGCTCCGCAGTCTGGCCTCTGACGGCAACTACGGCCGCCTCTCCCGAGC TATTGGTAGCGTTGGGCTTGCATCCTGGCGCGGGCGCGGACCCCGAGGGC ATATCCTCGGCGATCGACCACGGTATCGTGATTTCGGAGACAGCGTGCAG TACGAGTCGTTCGACTTCCACAAGGAATATGATCTTCACAAGCTTACCAA AAAGCTCGAGAAAATCAAGGCCTACGGAGGCCAAGACTTCCCGGAGGACG TTGCTGGAGGGTTGAAGCTCGCGACGGAGCTTGTCTGGAGGGGCAACATC CGCCTTTGCATCCTCCTCGCCGACGCGCCGTGTCACGGTAACGTGCACCA CACCGGGGCTGGGGATATGTTCCCGAACTGCTGTCCCATGGGAAACGATC CAGCCAAGCTGCTCTACAAGTTGCAGGTGTGA back to top
|