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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LPZ1 |
| ProteomeId | EsuBft1254_7 |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Protein domains | TMhelix |
| Protein domains | Coil |
| Protein domains | TRANSMEMBRANE |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 195 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.99e-99 |
| EggNOG OGs | KOG3676@1|root,KOG3676@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | calcium ion transmembrane transport |
| COG category | U |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1254_7a-0001 ID=EsuBft1254_7a-0001|Name=EsuBft1254_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1950bp|location=Sequence derived from alignment at Scaffold_195:652100..656506+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACCAGCGCTCAATTTTCAATATGGGCTAGTGCTGGACTTGGCAAGTG GGACGGTATCGCACTGCTTCTGAAGAATTATGCATGTCCGTCTCCTGAAG ACCTCATTGATCTCTCTCGCAAGCACCCTTCTGACGAGCGGCTGCACGAC TGCTGTTTGAGAGTTGTAGCCGCGTCAGACAACCTGTTCATTTCCGGCAT GACTTTGTCTGTGGCACGCGTGGATGTGACGAAGAAAGCTCCAGAGGGAG AGAGGGGTACCCTTGAGGCCATCCAGGGCCATGTACATGCCTTACTGCTT GAAATTCTCGAACGCTTGCCTCAAACAGTCAATGGTTTCAACGGAGGAAT GGCCGACTGCTCAGCCGTGTTAGGGCCAGAGTTCGACAGCAAAACGGGAG AATCTACGGGCTTCAAGCCACCGCTGGCCCTGCTCCTCCTGGCGAACAGT ATTCAGACGGAAACGTTTTGCTCGACGCCCTTAATCATGGACTACTTGTC ACGGAAATTCACGCATGGTCTGCCCGACGTGGGCGACAAGGACGGCGTGC TTCGGAATGGCACAGAACATGATGTGCTGAGCGGCAGTGGGCCAGGCATG ATGTCCCTGGTCATTGGTGGTGGCGATGACGAAGAACTGGACGAAAGAGG TTATCACGAATTCCGACACAAGGATCTTCTGGTCAAGAATGGCCTAAAGG CCAGCTTTGAATCCCCTCGTGCGTTGCTTCAGGGAGCGAATGATAGGCTT GCCAGCCTGACGTTTCTTCCTGGGGCTCAATTTGCGATCGCAGGATTTCT GGCGAAGCCTAACAACTACTATCGAATCCCCGCTGTGAGGATGGTGCTAG ACGTTGTGGTGTACCTCTTGGTGATCATTGCGTTGAGCATCCTGGTCTTC CGCGACAGCGGGTCGCTGACACGGGGAGAGGGCATCGCCGCGGCTGTTAT TTTCGCGATGACGGCTCAGCTCGTGAGGTTCGGGATTGTGATGTTGGTTG TCATGGTCGGATTCGCCATGTCCCTGCACGTGCTGATTCGCGACTCCAAA AGCTTTGGTGAAACGTTTGTCGCACTATTCAAAGCGACGCTTGGTGACGT GGACTACTTCACGGCGTCCTCTGTGCTCAACCTGCTGGTTGCGATATTGA CCGTATCGCACTCCAAGGTACAGGAGAACGTTCAACGGGAGTTCAAGGTT TCGAAGGCGCGCATGATCCAGCGATGCCGATGGACTGTAGAAAACGACTG GCTTCCTGCCCCGTTCAACGTGGCACAGCTACTTTTCTCGGGGCAATACG CGTTGGTGATGCCCAGCTTTCGGCGGAAACGGTATGATGAAGCAAAGCAA GCCATTGGTCAGGCAGTGTCCTGGTTTGTGCTCGGTCTAATGGCTTTTGT GGGGGGATCGATTCTCTGGATATTGTCGGTTGTGTACGCACTCTTTGTGT GGCATGAGCACTACTACGTAGGGCTAGACACGCATACTGCTCACGTTATA ATACTTCAAACTGAGCCTGGGAGCAACGATACTGCGGTATATCCTTATCC CTGTGTGGTGCGTCTTGGATGCTCCGTTGTGTCGTTTCCTGCTCGGGGTC AAGACGCTTCTACTCGGGCAAGTAGCGGGGGAGATGGCATGCTTAAGAGT GCCGATCAGGGAGTAGGAATGGCAAAATTGCGCGAATTCCTCGCCGACCC AATGAACAACAGAGATGTTCGTAAGGCCGGGACGACAAGGAGCACCACCG TGGAACACCTTAAACTTCTTAGGGACCGCCTAGTGAAAGACATTGTAGGT AGGCTCTGCAGACTTTTGAGAAAAGGGAAGGCATGGCCCAAACACTTGAT TGAGGCTTTCGATCAGCGCTTGCAACAACTCGAAGCAAAGGTTGCCGAGA CCAATGATTACCTAATTGAAATTTTGAAGTTCGTCAAGAACCCACGGTGA back to topprotein sequence of EsuBft1254_7a-0001 >EsuBft1254_7 ID=EsuBft1254_7|Name=EsuBft1254_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=649bp
MTSAQFSIWASAGLGKWDGIALLLKNYACPSPEDLIDLSRKHPSDERLHD CCLRVVAASDNLFISGMTLSVARVDVTKKAPEGERGTLEAIQGHVHALLL EILERLPQTVNGFNGGMADCSAVLGPEFDSKTGESTGFKPPLALLLLANS IQTETFCSTPLIMDYLSRKFTHGLPDVGDKDGVLRNGTEHDVLSGSGPGM MSLVIGGGDDEELDERGYHEFRHKDLLVKNGLKASFESPRALLQGANDRL ASLTFLPGAQFAIAGFLAKPNNYYRIPAVRMVLDVVVYLLVIIALSILVF RDSGSLTRGEGIAAAVIFAMTAQLVRFGIVMLVVMVGFAMSLHVLIRDSK SFGETFVALFKATLGDVDYFTASSVLNLLVAILTVSHSKVQENVQREFKV SKARMIQRCRWTVENDWLPAPFNVAQLLFSGQYALVMPSFRRKRYDEAKQ AIGQAVSWFVLGLMAFVGGSILWILSVVYALFVWHEHYYVGLDTHTAHVI ILQTEPGSNDTAVYPYPCVVRLGCSVVSFPARGQDASTRASSGGDGMLKS ADQGVGMAKLREFLADPMNNRDVRKAGTTRSTTVEHLKLLRDRLVKDIVG RLCRLLRKGKAWPKHLIEAFDQRLQQLEAKVAETNDYLIEILKFVKNPR back to topmRNA from alignment at Scaffold_195:652100..656506+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1254_7a-0001 ID=EsuBft1254_7a-0001|Name=EsuBft1254_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4407bp|location=Sequence derived from alignment at Scaffold_195:652100..656506+ (Ectocarpus subulatus male Bft15b) ATGACCAGGTAAGTGGTCGTGTAGGTCATCACGTGTGCTATGGTCAACTA
TCGTAATGAATGAGCGCCCGCAACTCGTGCGGATGGGTGCGGGCTCGTAG
CTCGCGTCGTTCATCATCTTATGACCAGGACACATCTAATGAGTTTGCCA
TGACCCTGGTGATCTCACCTCCGAGCACCTTGTGTTCCCGACCCAAGAGA
CTACCTTGTCTGGTTTTCGATAGGTGAGCCAGTCCATCGTGATACTCTGT
ATTCGCGTCGGCAAATGATCTTGAGCCAATCGACCTGGTTGGCGCAGCTT
GTGGTTGTTTCGAAAGTGCTCGGTCCAAAACACCCTCGCTCCGTCGATCG
CTCATGGGCACGTTTCATATCTCGTCGCCTTGGGTGAGCTTTTTTTGTCC
CTCCCGATTTGCTTGGTTCTGGCCGGTCTAGTTTACCAGTAGGTCAGTTT
CCTCCACAAGAGGTTTCTCAATCACCGGCCCGTACTGTAGTTGTTCGTCA
TAGTTTGAATGTATCGAAGGAGCCCCACAAGCGCTGGCTACAATCGTCCC
GTCGCGTGACACGTGCACTGAAGTTTGTTCCCGCTCGCCATGAGCTCCAA
GTGGTGAATGTATCCGTCAACGTTGAATGATGTGAGGGACCATTCGAGGG
TCGGAATAACCGAAAGGCAGCGTTTGCACATCGATGGAGGCCCTTCGCTA
TCCCCCGTACGCCATGCAGCTCATTGAACTGATCATGGCAAGGGAGGGTT
TCGGCATGTCACTCCTGGGTTGCACCGTCGTTACAAGACGCCGTCACTAT
GGATATTCCAAGGATACTTTATGTAAGACTGTTTTTTCTTTCTTTTTTCC
ATGATAGTCGACAGAGAGGTATCTCTACTGGCAACGTCACCGTCAGGCGG
GTGCGAAATGGTTTGCCAGATTGTTGAAACCTAACAAAGTGAAGGAGAGT
CCTCCGGTGTGGTAGGAGCGTCGGGAACATCCTTTGGACAAAGGTTTCTC
TTGTGGATACGAGTGCTTTGTTTCGTCTATGATGTTTGTGGAAAACTTGA
ATCAACGCGTCCCGGATTCTTGAACGTGTGAAAGTTACTTCGAGCACGGT
GGTTCCGCTTTATTTCTTTCAGACTTGCTGCGCCATGCGCCTTACCTTGT
ATTGTAGGATCTTCCGACTATGTCCTGGTGGACGCAGATTTGATTCAGTT
TCCTATCTATTTTGGATGGTATGAAGGTCATGTCTCAAGGTGAACAAAAA
TACAATGAACTGATGGTGACAAAAATCGTCTGCTCGCGCAATCGGGCGAA
ATATTGACTACATCGTAGTGAGGCTTTTGCTCTCGCTTTCGCATCTTCTT
ATTGTGGGGTATTGTGAATCAAGTCGCTCCATTTGGTGGCTGCGCCTTCT
CACGGAGATCGGCACGGTGCCAGGTTTTTGCTCATGACCAAGATACCATT
CCCGCACGGAGTGTCGGTCCCCTTTTCCACCTTTAGTTGTGCAACTGCAA
GTGGCAGACGAACTCAGCGCTCAATTTTCAATATGGGCTAGTGCTGGACT
TGGCAAGTGGGACGGTATCGCACTGCTTCTGAAGAATTATGCATGTCCGT
CTCCTGAAGACCTCATTGATCTCTCTCGCAAGCACCCTTCTGACGAGCGG
CTGCACGACTGCTGTTTGAGAGTTGTAGCCGCGTCAGACAACCTGTTCAT
TTCCGGCATGACTTTGTCTGTGGCACGCGTGGATGTGACGAAGAAAGCTC
CAGAGGGAGAGAGGGGTACCCTTGAGGCCATCCAGGGCCATGTACATGCC
TTACTGCTTGAAATTCTCGAACGCTTGCCTCAAACAGTCAATGGTTTCAA
CGGAGGAATGGCCGACTGCTCAGCCGTGTTAGGGCCAGAGTTCGACAGCA
AAACGGGAGAATCTACGGGCTTCAAGCCACCGCTGGCCCTGCTCCTCCTG
GCGAACAGTATTCAGACGGAAACGTTTTGCTCGACGCCCTTAATCATGGA
CTACTTGTCACGGAAATTCACGCATGGTCTGCCCGACGTGGGCGACAAGG
ACGGCGTGCTTCGGAATGGCACAGAACATGATGTGCTGAGCGGCAGTGGG
CCAGGCATGATGTCCCTGGTCATTGGTGGTGGCGATGACGAAGAACTGGA
CGAAAGAGGTTATCACGAATTCCGACACAAGGATCTTCTGGTCAAGAATG
GCCTAAAGGCCAGCTTTGAATCCCCTCGTGCGTTGCTTCAGGGAGCGAAT
GATAGGCTTGCCAGCCTGACGTTTCTTCCTGGGGCTCAATTTGCGATCGC
AGGATTTCTGGCGAAGCCTAACAACTACTATCGAATCCCCGCTGTGAGGA
TGGTGCTAGACGTTGTGGTGTACCTCTTGGTGATCATTGCGTTGAGCATC
CTGGTCTTCCGCGACAGCGGGTCGCTGACACGGGGAGAGGGCATCGCCGC
GGCTGTTTCATAGCGGTGAGTTGAGGTCGCGGGCGGGCGGTCAACCACTG
TTGTTGCCAGCGCACTCTCCAGGTTCGATGTGTGGGCACTTCGCCGACTC
CTTTATTCGCGAAACCCGTTGAGGTCGGTTTTTGTTTCGATTCTTTTTTG
ACTGCAGCCAAATATTCGTGCGGCTGCGTCCGAGCCTCGGTCATGGCCTC
GTTGTGCTTGGGAAATTAAACCGCAAACTACCAGATTGTTTGTTTCGCGG
CTCATCGGCTTATTCTCGCTTCCGTGCGTACCTCTCCAAAAATCTTGCCG
GGTCGGCCGTTTCAGACAAGAACTTTGAGAGAGAAGCGCGAGCTTCACAA
CTGCGTCAAGGAACCTGGTGCCTTGTGGACCGGTGTAGGGGTATTCTTCC
AAGACCCATGGAACGCTGTTGACGTGATGGGGTGGCAGCTCCAAGTGCCG
GCTTGGTCGTCCGCGGCTTAGATGGTGCCAGTTCAATGGGGCAAGGGTTG
TACGCCCTAAGTGCTCCGCTGTTCGTTGCACGCGTCCTCTTTTTCGCGCA
GATCCTCCCTTCCCAAAGACCAATGATTCAGGCAAGCGGCTATCGTATAC
CTGTCTGTGTTTCTCTCGGACCGCCTTCGTTGTTGATGTTGTTCAAAGTG
GATCAGACCTGAAATTCCGTCGCCTTTATGCGTTTGGAGGACGTGCGGCC
TCCGATCACTTCCCATGGCGGCAAAGGCAGCAAGGGGAAAAGGCACAACG
GTCCATTGGTTTTCGTAGCAGTAGCAGTTATGATGTCTTGGAATGTATGA
GCATCTCGCAATCCAATGGCCACCACGATGTCCCCTTCGCACTCTTGGCG
CAGGTTATTTTCGCGATGACGGCTCAGCTCGTGAGGTTCGGGATTGTGAT
GTTGGTTGTCATGGTCGGATTCGCCATGTCCCTGCACGTGCTGATTCGCG
ACTCCAAAAGCTTTGGTGAAACGTTTGTCGCACTATTCAAAGCGACGCTT
GGTGACGTGGACTACTTCACGGCGTCCTCTGGTGGCCGGCACGAACGGTG
GGGACAATTCTTATCGTGACATCTGGTGGTGGTCACAGTGCTCAACCTGC
TGGTTGCGATATTGACCGTATCGCACTCCAAGGTACAGGAGAACGTTCAA
CGGGAGTTCAAGGTTTCGAAGGCGCGCATGATCCAGCGATGCCGATGGAC
TGTAGAAAACGACTGGCTTCCTGCCCCGTTCAACGTGGCACAGCTACTTT
TCTCGGGGCAATACGCGTTGGTGATGCCCAGCTTTCGGCGGAAACGGTAT
GATGAAGCAAAGCAAGCCATTGGTCAGGCAGTGTCCTGGTTTGTGCTCGG
TCTAATGGCTTTTGTGGGGGGATCGATTCTCTGGATATTGTCGGTTGTGT
ACGCACTCTTTGTGTGGCATGAGCACTACTACGTAGGGCTAGACACGCAT
ACTGCTCACGTTATAATACTTCAAACTGAGCCTGGGAGCAACGATACTGC
GGTATATCCTTATCCCTGTGTGGTGCGTCTTGGATGCTCCGTTGTGTCGT
TTCCTGCTCGGGGTCAAGACGCTTCTACTCGGGCAAGTAGCGGGGGAGGT
ACACCCTGCCGAACCGGGTAGTCTATACCGGTAACAGTAGATGGCATGCT
TAAGAGTGCCGATCAGGGAGTAGGAATGGCAAAATTGCGCGAATTCCTCG
CCGACCCAATGAACAACAGAGATGTTCGTAAGGCCGGGACGACAAGGAGC
ACCACCGTGGAACACCTTAAACTTCTTAGGGACCGCCTAGTGAAAGACAT
TGTAGGTAGGCTCTGCAGACTTTTGAGAAAAGGGAAGGCATGGCCCAAAC
ACTTGATTGAGGCTTTCGATCAGCGCTTGCAACAACTCGAAGCAAAGGTT
GCCGAGACCAATGATTACCTAATTGAAATTTTGAAGTTCGTCAAGAACCC
ACGGTGA back to topCoding sequence (CDS) from alignment at Scaffold_195:652100..656506+ >EsuBft1254_7a-0001 ID=EsuBft1254_7a-0001|Name=EsuBft1254_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1950bp|location=Sequence derived from alignment at Scaffold_195:652100..656506+ (Ectocarpus subulatus male Bft15b) ATGACCAGCGCTCAATTTTCAATATGGGCTAGTGCTGGACTTGGCAAGTG GGACGGTATCGCACTGCTTCTGAAGAATTATGCATGTCCGTCTCCTGAAG ACCTCATTGATCTCTCTCGCAAGCACCCTTCTGACGAGCGGCTGCACGAC TGCTGTTTGAGAGTTGTAGCCGCGTCAGACAACCTGTTCATTTCCGGCAT GACTTTGTCTGTGGCACGCGTGGATGTGACGAAGAAAGCTCCAGAGGGAG AGAGGGGTACCCTTGAGGCCATCCAGGGCCATGTACATGCCTTACTGCTT GAAATTCTCGAACGCTTGCCTCAAACAGTCAATGGTTTCAACGGAGGAAT GGCCGACTGCTCAGCCGTGTTAGGGCCAGAGTTCGACAGCAAAACGGGAG AATCTACGGGCTTCAAGCCACCGCTGGCCCTGCTCCTCCTGGCGAACAGT ATTCAGACGGAAACGTTTTGCTCGACGCCCTTAATCATGGACTACTTGTC ACGGAAATTCACGCATGGTCTGCCCGACGTGGGCGACAAGGACGGCGTGC TTCGGAATGGCACAGAACATGATGTGCTGAGCGGCAGTGGGCCAGGCATG ATGTCCCTGGTCATTGGTGGTGGCGATGACGAAGAACTGGACGAAAGAGG TTATCACGAATTCCGACACAAGGATCTTCTGGTCAAGAATGGCCTAAAGG CCAGCTTTGAATCCCCTCGTGCGTTGCTTCAGGGAGCGAATGATAGGCTT GCCAGCCTGACGTTTCTTCCTGGGGCTCAATTTGCGATCGCAGGATTTCT GGCGAAGCCTAACAACTACTATCGAATCCCCGCTGTGAGGATGGTGCTAG ACGTTGTGGTGTACCTCTTGGTGATCATTGCGTTGAGCATCCTGGTCTTC CGCGACAGCGGGTCGCTGACACGGGGAGAGGGCATCGCCGCGGCTGTTAT TTTCGCGATGACGGCTCAGCTCGTGAGGTTCGGGATTGTGATGTTGGTTG TCATGGTCGGATTCGCCATGTCCCTGCACGTGCTGATTCGCGACTCCAAA AGCTTTGGTGAAACGTTTGTCGCACTATTCAAAGCGACGCTTGGTGACGT GGACTACTTCACGGCGTCCTCTGTGCTCAACCTGCTGGTTGCGATATTGA CCGTATCGCACTCCAAGGTACAGGAGAACGTTCAACGGGAGTTCAAGGTT TCGAAGGCGCGCATGATCCAGCGATGCCGATGGACTGTAGAAAACGACTG GCTTCCTGCCCCGTTCAACGTGGCACAGCTACTTTTCTCGGGGCAATACG CGTTGGTGATGCCCAGCTTTCGGCGGAAACGGTATGATGAAGCAAAGCAA GCCATTGGTCAGGCAGTGTCCTGGTTTGTGCTCGGTCTAATGGCTTTTGT GGGGGGATCGATTCTCTGGATATTGTCGGTTGTGTACGCACTCTTTGTGT GGCATGAGCACTACTACGTAGGGCTAGACACGCATACTGCTCACGTTATA ATACTTCAAACTGAGCCTGGGAGCAACGATACTGCGGTATATCCTTATCC CTGTGTGGTGCGTCTTGGATGCTCCGTTGTGTCGTTTCCTGCTCGGGGTC AAGACGCTTCTACTCGGGCAAGTAGCGGGGGAGATGGCATGCTTAAGAGT GCCGATCAGGGAGTAGGAATGGCAAAATTGCGCGAATTCCTCGCCGACCC AATGAACAACAGAGATGTTCGTAAGGCCGGGACGACAAGGAGCACCACCG TGGAACACCTTAAACTTCTTAGGGACCGCCTAGTGAAAGACATTGTAGGT AGGCTCTGCAGACTTTTGAGAAAAGGGAAGGCATGGCCCAAACACTTGAT TGAGGCTTTCGATCAGCGCTTGCAACAACTCGAAGCAAAGGTTGCCGAGA CCAATGATTACCTAATTGAAATTTTGAAGTTCGTCAAGAACCCACGGTGA back to top
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