Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G105 |
| ProteomeId | EsuBft2871_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 2759|Eukaryota |
| Length | 22 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.59e-36 |
| EggNOG OGs | 2AWDH@1|root,2RZYI@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Description | DDE superfamily endonuclease |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2871_4a-0001 ID=EsuBft2871_4a-0001|Name=EsuBft2871_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=228bp|location=Sequence derived from alignment at Scaffold_189:618578..618805- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGCCACTGCCGCGTAACGGTGGAGTGGGGATTCAAAGAGATGACCGG
CAAGTGGGCCTTTGTGAACATGAAGCCGCAGCAGAAATTCTTGCTAAGCC
CTGTCGCCAAGCAGTACCTGGTAGCCACTCTGCTTTCTAACTGGCACTCA
TGCATGAACGGGGGCAACGAGATTTCGCAATACTTTGGCGTGGTGCCACC
CACTTTCGAGGAGTACGTAGCGGTGTAA back to topprotein sequence of EsuBft2871_4a-0001 >EsuBft2871_4 ID=EsuBft2871_4|Name=EsuBft2871_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=75bp
MSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVAKQYLVATLLSNWHS
CMNGGNEISQYFGVVPPTFEEYVAV back to topmRNA from alignment at Scaffold_189:618578..618805- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2871_4a-0001 ID=EsuBft2871_4a-0001|Name=EsuBft2871_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=228bp|location=Sequence derived from alignment at Scaffold_189:618578..618805- (Ectocarpus subulatus male Bft15b)
ATGAGCCACTGCCGCGTAACGGTGGAGTGGGGATTCAAAGAGATGACCGG
CAAGTGGGCCTTTGTGAACATGAAGCCGCAGCAGAAATTCTTGCTAAGCC
CTGTCGCCAAGCAGTACCTGGTAGCCACTCTGCTTTCTAACTGGCACTCA
TGCATGAACGGGGGCAACGAGATTTCGCAATACTTTGGCGTGGTGCCACC
CACTTTCGAGGAGTACGTAGCGGTGTAA back to topCoding sequence (CDS) from alignment at Scaffold_189:618578..618805- >EsuBft2871_4a-0001 ID=EsuBft2871_4a-0001|Name=EsuBft2871_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=228bp|location=Sequence derived from alignment at Scaffold_189:618578..618805- (Ectocarpus subulatus male Bft15b)
ATGAGCCACTGCCGCGTAACGGTGGAGTGGGGATTCAAAGAGATGACCGG
CAAGTGGGCCTTTGTGAACATGAAGCCGCAGCAGAAATTCTTGCTAAGCC
CTGTCGCCAAGCAGTACCTGGTAGCCACTCTGCTTTCTAACTGGCACTCA
TGCATGAACGGGGGCAACGAGATTTCGCAATACTTTGGCGTGGTGCCACC
CACTTTCGAGGAGTACGTAGCGGTGTAA back to top
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