Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft468_18 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 81 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft468_18a-0001 ID=EsuBft468_18a-0001|Name=EsuBft468_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=810bp|location=Sequence derived from alignment at Scaffold_189:473251..475135- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAAGGCCACCGAAGAAGTAGACGTGGACCTTCTTCGCTCCCTCGCGGA
GGTAGCGATGATCAAGGGCTTCCGCAGCGGGAAGCTGGAGGAGGCCATCG
CGGCGTTGGCGAAGTACGACAGCCAGCAGGCGGGCATTGCGCTCATGAGG
AGACTTCTCCGACGACTAATGTCTACGGCGGCCGAGGTTGCTCGCGTCAC
GAGGGCCGTCCTTCTGCTGTCCACCACCGTGAAGGGGCTGCAGCATGTCG
CTGTGGTCGACGCCGCCCGACTAGCGTCCGAGAGGACCGCCGCCACGACC
GCCAGCGACGATGCTGCTGCGCTTGCGAAAGCCCTGCGCGACACCACCGA
GGGGTTGGAAGGCACGGTGGCCACCCTCGAGACCGCGGCCGCTGCTGACG
CCGAAAGTTGTCGCACGATGGAGAGCGACCTTCGGGCCGACTTCGTCGCC
GCTCACGGCACCAACGACGCTCTGCAGGCCACCGTGGACGAGCAGCAGCG
GGCTCCCGAGGTCGCGGCGGAACGCTCCGGGCTGGCTGTCCGTCGGCTCG
AGGACCAGCTGCAGAGTTCTCGACGCGACGCTTCCCAGGGGCGAGCTTCC
ACGCTCGCCGTTCGCCAAGAGCTAGCGGCGTGCGAGGACGACGTGGCTGA
GGTGGACGAGGCGTCGGTCGCACTCTCCCTCGTGGCCGCGGAGAGCACTA
TCCTCCTCGGAGGGGGTCTCCAGCCGGCCACCTCCAGGCCTGCGGAGGTC
ACCACACGGGAAGGGTCCGACCTGTCGGCAGCTAACGAGGCGCGCCAACG
GACATGGTGA back to topprotein sequence of EsuBft468_18a-0001 >EsuBft468_18 ID=EsuBft468_18|Name=EsuBft468_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=269bp
MKATEEVDVDLLRSLAEVAMIKGFRSGKLEEAIAALAKYDSQQAGIALMR
RLLRRLMSTAAEVARVTRAVLLLSTTVKGLQHVAVVDAARLASERTAATT
ASDDAAALAKALRDTTEGLEGTVATLETAAAADAESCRTMESDLRADFVA
AHGTNDALQATVDEQQRAPEVAAERSGLAVRRLEDQLQSSRRDASQGRAS
TLAVRQELAACEDDVAEVDEASVALSLVAAESTILLGGGLQPATSRPAEV
TTREGSDLSAANEARQRTW back to topmRNA from alignment at Scaffold_189:473251..475135- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft468_18a-0001 ID=EsuBft468_18a-0001|Name=EsuBft468_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1885bp|location=Sequence derived from alignment at Scaffold_189:473251..475135- (Ectocarpus subulatus male Bft15b)
ATGAAGGCCACCGAAGAAGTAGACGTGGACCTTCTTCGCTCCCTCGCGGA
GGTAGCGATGATCAAGGGCTTCCGCAGCGGGAAGCTGGAGGAGGCCATCG
CGGCGTTGGCGAAGTACGACAGCCAGCAGGCGGGCATTGCGCTCATGAGG
TGAGAGGAACGTGTGTCATATTGTTATTTGCTGTATGCATACCTGTTCGA
AAGGAAGCGATCGTAGAATTTAACCCTTCCTTCTGTTTGGTCACTCCTCC
GACTATCAAAGTCCATGATTGAATATTAAATCGTGCTGTTTTCCAAGGTC
GGACGGGGGGGGCTACAGTACATCATCCCCCCCTCCCGCCATCGGAGTCA
ACGTCAGGAGCAATAGCTGCATAGCTCGGTGGGATTGTGATATACCGTGA
GTCTATGTGCTCGGTGCCATGTGCAGTAGATGGAGCATGCGTGACTGAGG
AACTTGCTGCTGTGAACACTACATGTACCTGGAGTATTAGATTTCCCGGT
ACGGCATTACCGGGTTGCACCGGGCTGCACGTTCGTGGTGTGCCGTTTGT
CCATCATTTCCATCATGGCGGAGGTTACGTAGATCGAGCTGTTTCGTACA
ACACGATGTGCATTCCTACTTAGCCGCCATGTATGAAGGACGCGCTGTTG
TTTCTGGAATTTGTTTTCAGGAGACTTCTCCGACGACTAATGTCTACGGC
GGCCGAGGTTGCTCGCGTCACGAGGGTAAGTCCTATGTTGTCCATCCACT
AGAGTGATGGATTGTTGAGTGCGCTATAGATGTCTCCGGCAGTTCTCGTG
AACTGCTATTATTTTACAAAGGCAACACAAAAATAGCCTAAGACAACATT
TCGCTTTACGGTACACCCCATCGTGGTTATGTGTGTTACAATGTCACCGC
TCGCTGTAGTGCACACTCGGAGTAACGAACATGGTACCGTGAAACCGTCG
TGATGTGTACGTGTCCTTCCTTCAGTAAACGCCCCACCCCCCCCCAATAG
ACAAACCAACAATCAACCCCAACCCGTGACGCATGGCAACCGTCAAGAAC
ATCGCAGGCTTTACTTTTTCGCCAAGCAGTGTGTCGCTCCGTGGAATCAC
AGGAATATCCATCGCTCGCATTCCGGCTGCGTAGTTGTTGTCGGTGTCTT
CACAGTTGTTCCGAAGTTTTCCCCCACACTCACAAGCCCCTTCTTCCCTT
CCACCCGCCATGATATGTGGTAACGTGCCGCCAGATGTGCTCCGACATCC
ATCTCGACCGGGTCGCTGGGCTGAAGCAGGCCGTCCTTCTGCTGTCCACC
ACCGTGAAGGGGCTGCAGCATGTCGCTGTGGTCGACGCCGCCCGACTAGC
GTCCGAGAGGACCGCCGCCACGACCGCCAGCGACGATGCTGCTGCGCTTG
CGAAAGCCCTGCGCGACACCACCGAGGGGTTGGAAGGCACGGTGGCCACC
CTCGAGACCGCGGCCGCTGCTGACGCCGAAAGTTGTCGCACGATGGAGAG
CGACCTTCGGGCCGACTTCGTCGCCGCTCACGGCACCAACGACGCTCTGC
AGGCCACCGTGGACGAGCAGCAGCGGGCTCCCGAGGTCGCGGCGGAACGC
TCCGGGCTGGCTGTCCGTCGGCTCGAGGACCAGCTGCAGAGTTCTCGACG
CGACGCTTCCCAGGGGCGAGCTTCCACGCTCGCCGTTCGCCAAGAGCTAG
CGGCGTGCGAGGACGACGTGGCTGAGGTGGACGAGGCGTCGGTCGCACTC
TCCCTCGTGGCCGCGGAGAGCACTATCCTCCTCGGAGGGGGTCTCCAGCC
GGCCACCTCCAGGCCTGCGGAGGTCACCACACGGGAAGGGTCCGACCTGT
CGGCAGCTAACGAGGCGCGCCAACGGACATGGTGA back to topCoding sequence (CDS) from alignment at Scaffold_189:473251..475135- >EsuBft468_18a-0001 ID=EsuBft468_18a-0001|Name=EsuBft468_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=810bp|location=Sequence derived from alignment at Scaffold_189:473251..475135- (Ectocarpus subulatus male Bft15b)
ATGAAGGCCACCGAAGAAGTAGACGTGGACCTTCTTCGCTCCCTCGCGGA
GGTAGCGATGATCAAGGGCTTCCGCAGCGGGAAGCTGGAGGAGGCCATCG
CGGCGTTGGCGAAGTACGACAGCCAGCAGGCGGGCATTGCGCTCATGAGG
AGACTTCTCCGACGACTAATGTCTACGGCGGCCGAGGTTGCTCGCGTCAC
GAGGGCCGTCCTTCTGCTGTCCACCACCGTGAAGGGGCTGCAGCATGTCG
CTGTGGTCGACGCCGCCCGACTAGCGTCCGAGAGGACCGCCGCCACGACC
GCCAGCGACGATGCTGCTGCGCTTGCGAAAGCCCTGCGCGACACCACCGA
GGGGTTGGAAGGCACGGTGGCCACCCTCGAGACCGCGGCCGCTGCTGACG
CCGAAAGTTGTCGCACGATGGAGAGCGACCTTCGGGCCGACTTCGTCGCC
GCTCACGGCACCAACGACGCTCTGCAGGCCACCGTGGACGAGCAGCAGCG
GGCTCCCGAGGTCGCGGCGGAACGCTCCGGGCTGGCTGTCCGTCGGCTCG
AGGACCAGCTGCAGAGTTCTCGACGCGACGCTTCCCAGGGGCGAGCTTCC
ACGCTCGCCGTTCGCCAAGAGCTAGCGGCGTGCGAGGACGACGTGGCTGA
GGTGGACGAGGCGTCGGTCGCACTCTCCCTCGTGGCCGCGGAGAGCACTA
TCCTCCTCGGAGGGGGTCTCCAGCCGGCCACCTCCAGGCCTGCGGAGGTC
ACCACACGGGAAGGGTCCGACCTGTCGGCAGCTAACGAGGCGCGCCAACG
GACATGGTGA back to top
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