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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft652_11 |
| Protein domains | G3DSA |
| Protein domains | SSF52047 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 371 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft652_11a-0001 ID=EsuBft652_11a-0001|Name=EsuBft652_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3717bp|location=Sequence derived from alignment at Scaffold_614:152915..157651- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGCAGTGGATTGTCGAGCCCTATCGGTGATGCTGCGGAGAGGTTTTGGCA AACTGGAGGAGTCGAGCACTGCTGACGGTGGCGACGGCGCAGAGACTAAC GATCACTCGGGTGCATCCGCGACCAGTGGGAAGAAGTGCATCTTGAGGGG GCTAGCTGTGTGCAGCGCTGCGGTGCAGGACCAGGCAATAGCTCGGGCTC TCGAGATGCACGGGGAAGGCCTCCAAGTCCTTGACCTCGCCGGCTGCCGC GGTCTGGACACGTCATTGACGATGGAGGCGGTGCGGTCGCGGTGCAAACG CCTCGTCGCCTTGGACCTGTCCGGAGGGAGATCTTTCGAGGGCAAGGGGC GCGGAGAGATAGGATGCAACCCTTCCGTGGCGACGCCGAGGTGTGCGGTA GGCGGGACGTCATTTGAGGGGGAAGTTGGATTGGGTCTCAACCGGCGTCA CCCGAGTTGCAGCCCATCGGTGGCCAGTCTTTCGATTCCGGAGAACAACC ACCACCGACTGCGTGACTACCATCTGGTTTCGCTGCTGACCGGGCTTGGC GGCACACTTTTGTCCCTGCAGCTACGGGATCGGCCGTTCATAACTGACCA CGGAATCTGGGCCATCGCAGTCGCTTGCACGCAGCTGCAGGAGTTGGACA TCGGGTGAGCAACCGAGCGTTGATGCAACAATCGACCGGGCTATGTTGTT ATTGGTGAACACACACAAAGTGGTCAGAATGGTTGTTTGATTCGATACTA GGGGGAACGATTGGCCCCCCACCCCCCAGTGGGGCGGGCGGCCAGTATGC GTGGGATGGGTGCGGCGGTTTGAAAGTTAGAGCGACTAGAGGCAATGACG ACACCCGTACGAAAGAAGGGCCAAGAGCGACCAATCTCGTCGTACGTACG AAGCGTTGGGAGCGATTCTTGAAACCAATTGTCCTCTGCTAGCAGTTGCT AGCAGCATACAAGCGAGGGAAGCAAGATGTCCACGTCCACACGGCAGCAC CAGCAGCAGCAAGTACAGCAGCCGTAGCTGATTGATGATGAATGAGAGTT GTTTTTCGTTCACGCCAATCAACAGTCAAAGTCGTTCCCGCGCTGCTACG CAGCAGAGAGGTCTGCATACACGTGTACAGCAGTGGCAATGGTGACCTCT GTGTGATTGTTTAGGCCCCAACCACATCTATGTACCGTATGTAATTGGGC CCTCTCGGGGGGGTACCTAGGCTTGGCTACCACATAGAGGCTCAGGCGCA CCGTGCACGGCGAGCTGCCCGCATCGCCACGGAGTCGTTCGCAACTGTGT ATGTCTGTCTGTCTCTGCTGTTGTTCTGATAAGATCAAGATTACGAATCG CGACGGTGATTGGATGAGACACTACGTTGTTCCGCTCGGAACCAACATAT TTTGTGTTGCGTAGAGAGCGTTTCTGTTTTTTGGTGCGTGTCTTCCATCA AGCCTACATGCACCCCGTCAGCCACTGCTAAGTGTAGTGTTTCTTGCACC CACATCGATCTTCATATCTATCTCGGACACGCAGCGCGATTGATGCGAAT CTGTGGGTCCTTCAATGCGTGAGAAGCTTTGTCTACCCATCACCAGTCAA TGCTGTCAAGTTGTTGGATGTTTCAGGATTGTTTTTTGAGCGAAGAAATG GTATTTGCTTTGAGGGTCGGCGAGTACCTTCCTGTTCACTCTTCGTTCCA TCATCGGTGTTTTTTTTGTGAGGAACGCGTCAAACACATCATCGCATCAT TTTTCGGGATAGATAACAGCTCCATCTGCTACGTCTGTCTGCGGCAGATA TTCACATCTTTCCAGTACCGACCGGTCGCCCCGGTGGTCTAGTGGTATCC TCGTATTCCCCTAGTCGCAGAGGTCGTCAGTTCGAATCCCCACGTGGTGA AAAATTTACGACATATGCGGGTGAAAGCGAAATATAGCTAGAAAGCTCTC GTGAGTACCAAACTTCGACGTTAGCACCTTTGCCTAGGGAAAGATCGTCC CTGGACCCTTCTCGCGATAAAGAAAAAAAACAGCACGCACCGCAGGAGGA AGGTGGGGCATGAAAAGAAATAAAAAGAAGAAAAAAGCCCTGGTATTTAC CCCCTCCTGTGTGACCCTGGAAGGCTGTAGTAAGAAAAAATACACTGAAA GTGTAGCACTCTACATACGCTGACAAGTATAGTACATCTCACCACGAAAA ATGGGGGGATTGTCGCCATACTAAATAGGACGAAAACACACACACGCACA CAACCAGGAAGGAGCAGTCACTTGGTATGCATGTGATACTTCTCATCAAC GTTCGTGTTCACCTTACACGGAGAGCGGCGGAGCAAACGAAGGACGTGGG GGGCGGTAGCCCCGCGTCCTGAGCTCTTGTACTGGTATACTACCTTCCCT ATAAGACATGCATCACGACCACCGAAGAAAAGGACGAAAATGCTTGGGGT GGACATGGACAGCTAGACAACTGGAAGGGAGACTTGGGCGAATCAAAGTC GTTCGCGTAGTTTTCAGCAGCAGCAACAAACCCATGGCACATGTTGACGC AAGGTCGCGCGTCATGGATGGTGGGGCCCGCACCGATGGTCCGGCACGCT CTTTTGGACGCTGCTCATTGTCGTGTATGTACCGGTCTCGCCTTGGTGGA ATTGCTTGCTAAGATGAATACAGCGGTAGACTGTCGTATGAAACGTATGG ATGATGTTGTTCAGATGATGTTGCTGCTGTAGAAACACGTATACTTTCGA AGGGCCGGAAACAGTTCAGAGAAGCAGGAGTAGTTAGATATACTACTATG TGGTTGGGGCCTAAACCATCACACGGAGGTCACCATTGCCACGGTACATG TGTATGCAGGACTCCCTGCTGTGCAGCAACGCGGGAGGAACGAGTTCGAC TGTTGTTTGATGGTGTGAACAAAAAATGGCTCTAACCCATCATCAATCAG CTACTACTGCTGTACTTGTTGCTGCTGGTGCTGCCGTGCGGACGTGCATT TCTACTTCTCTCGCGTATATGCTGCTAGCAGAAGGCATTTAGTTCCAAGA ATCGTTTCCGACGCCTCGTACGTATGATGCATTTGGGCGCACTTGGTATA CAGCATGTATATCCGTCGTCAATTGTTCGTCTCTGTTTCAGGAGTGGGTG CATCAACCGAATGTATCGGAAACAGTGCAGCTACGAAACACAATCATGAC TGCGGGTGCCTGTGCTAAGACTTGTCTGCAGCAGCAGCGTTTCACTTGGC CCGGTGGCGTCGCATTGAAGTGCCCTTCGTTCGGTCGCAAGAGGGATTCC ATGAAGATAGTCTAGTTTTCCGTCGATCCACGACCCACCAAAAACCAAGT TGAGCACCCATGAATTTTCCCAAACTAGAACTTCGAAACGTATGACGACA CGACCGCAATCCTGTGAGTATAAATATAACATGATAAGAATCGTACAATA TGCGGGAGAAGCGTAGAGAGACACAACGCGCCTCTCACACCCGGGTGAAA AAGGTAGTTGAACACGGCGCCATGTATCCAGGGTTGGCTCTATGTTGACA AGGACACCCCATCGCTTCGATTTGCTGCGTCTTCGAAAGTACGATTGTTG GTGAGATTGTTGCCAACGTTTCCAGGAACGCCGGCATGCGCTTGAGTGAC GTTAAAATGCTGGCAAGTATTGTGTCGATCTTTTATCTTCCCCCGCTCGC CTCCGTCAACGTCTGGT back to topprotein sequence of EsuBft652_11a-0001 >EsuBft652_11 ID=EsuBft652_11|Name=EsuBft652_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=209bp
MLRRGFGKLEESSTADGGDGAETNDHSGASATSGKKCILRGLAVCSAAVQ DQAIARALEMHGEGLQVLDLAGCRGLDTSLTMEAVRSRCKRLVALDLSGG RSFEGKGRGEIGCNPSVATPRCAVGGTSFEGEVGLGLNRRHPSCSPSVAS LSIPENNHHRLRDYHLVSLLTGLGGTLLSLQLRDRPFITDHGIWAIAVAC TQLQELDIG back to topmRNA from alignment at Scaffold_614:152915..157651- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft652_11a-0001 ID=EsuBft652_11a-0001|Name=EsuBft652_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4737bp|location=Sequence derived from alignment at Scaffold_614:152915..157651- (Ectocarpus subulatus male Bft15b) TGCAGTGGATTGTCGAGCCCTATCGGTGATGCTGCGGAGAGGTTTTGGCA
AACTGGAGGAGTCGAGCACTGCTGACGGTGGCGACGGCGCAGAGACTAAC
GATCACTCGGGTGCATCCGCGACCAGTGGGAAGAAGTGCATCTTGAGGGG
GCTAGCTGTGTGCAGCGCTGCGGTGCAGGACCAGGTACGATATTGTGTCA
GCGGTGTTGGGCGCGTTGTTGGTGATGAGCACTTGAGTGGTGTGTCCTCA
AGCAGCTTCTGCCCGGCGGAGGAATCCGATTTTTCAAATAGGAACCAATC
TGAACAGTGGAAACAGCTGGTGGGAAACACCAAGTTGATGGTAACGTCGT
AACGTCTACATAAAAATCTGCTCTCAAACACACAAATCAGCCATCTGCTA
TGTCTCTTCACGCTGTAGTCTTTGAGTCCCGGGACGAAACCTGTACTTCA
GCGCTTGTGCATGCTACTTGTCATCTCAGGCAATAGCTCGGGCTCTCGAG
ATGCACGGGGAAGGCCTCCAAGTCCTTGACCTCGCCGGCTGCCGCGGTCT
GGACACGTCATTGACGATGGAGGCGGTGCGGTCGCGGTGCAAACGCCTCG
TCGCCTTGGACCTGTCCGGAGGGAGATCTTTCGAGGGCAAGGGGCGCGGA
GAGATAGGATGCAACCCTTCCGTGGCGACGCCGAGGTGTGCGGTAGGCGG
GACGTCATTTGAGGGGGAAGTTGGATTGGGTCTCAACCGGCGTCACCCGA
GTTGCAGCCCATCGGTGGCCAGTCTTTCGATTCCGGTGAGTCCAGCGCGC
GAGTCCTATATCGGTGAATAGAATAGCAGCGGAATCAAGAGAGAGAGAGA
GAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAAGAGAGAAGAGAGAAAGA
GCGGGAGAGCACAAATTGTCTTGACGCGCTTGAGCTGAGGATACAGACTA
GACCTGCCTGACCGCGTTGTTGGCCCCCTTCGTACGACAGCACACCGACC
CACATCGCACAGAGCGTAGTACAGCGGGTTGGGGCTAATGCTTTGCTTTG
CCCCCCTCTCGCCGCTGTGGCGATGCTGGCGGACTGCTCCCGCCGAAAAT
GACCAGTCTATGCGTGCATCAACACTAACAATGACAGCAACGTCCTTTGA
TGCTGTCAGGAGAACAACCACCACCGACTGCGTGACTACCATCTGGTTTC
GCTGCTGACCGGGCTTGGCGGCACACTTTTGTCCCTGCAGCTACGGGATC
GGCCGTTCATAACTGACCACGGAATCTGGGCCATCGCAGTCGCTTGCACG
CAGCTGCAGGAGTTGGACATCGGGTGAGCAACCGAGCGTTGATGCAACAA
TCGACCGGGCTATGTTGTTATTGGTGAACACACACAAAGTGGTCAGAATG
GTTGTTTGATTCGATACTAGGGGGAACGATTGGCCCCCCACCCCCCAGTG
GGGCGGGCGGCCAGTATGCGTGGGATGGGTGCGGCGGTTTGAAAGTTAGA
GCGACTAGAGGCAATGACGACACCCGTACGAAAGAAGGGTAAGTTTTGGA
TCCGACGTGGGTCCACACTATTGACTATTGTACGTCCGTTGTGTAGATAG
TCGTATGTTCTTAGTGGTACTGTTTCGAATGTACATTCGGTCGATGCACC
CACCCCTGAATCAGCGACAGACAACGATGCGTACACATTGCTGCAGGCCA
AGAGCGACCAATCTCGTCGTACGTACGAAGCGTTGGGAGCGATTCTTGAA
ACCAATTGTCCTCTGCTAGCAGTTGCTAGCAGCATACAAGCGAGGGAAGC
AAGATGTCCACGTCCACACGGCAGCACCAGCAGCAGCAAGTACAGCAGCC
GTAGCTGATTGATGATGAATGAGAGTTGTTTTTCGTTCACGCCAATCAAC
AGTCAAAGTCGTTCCCGCGCTGCTACGCAGCAGAGAGGTCTGCATACACG
TGTACAGCAGTGGCAATGGTGACCTCTGTGTGATTGTTTAGGCCCCAACC
ACATCTATGTACCGTATGTAATTGGGCCCTCTCGGGGGGGTACCTAGGCT
TGGCTACCACATAGAGGTACATGTAGCATCCACTCAAGCTCCAGCTCGAC
GCCTCACAGCGCAGCAGCAGGGGAATTACAGCAGCCCTGCTCTACGTATC
GAGACGAAAAACTTAGCGGGCCCGGCCGGCCTCCCACCGGACCCCGTTCG
CCCTCCCACTCCGCGGAGCCCGGGTGACGCCCTCTCTCCGCAAGACCCTG
CCGTCGCAGGCTCAGGCGCACCGTGCACGGCGAGCTGCCCGCATCGCCAC
GGAGTCGTTCGCAACTGTGTATGTCTGTCTGTCTCTGCTGTTGTTCTGAT
AAGATCAAGATTACGAATCGCGACGGTGATTGGATGAGACACTACGTTGT
TCCGCTCGGAACCAACATATTTTGTGTTGCGTAGAGAGCGTTTCTGTTTT
TTGGTGCGTGTCTTCCATCAAGCCTACATGCACCCCGTCAGCCACTGCTA
AGTGTAGTGTTTCTTGCACCCACATCGATCTTCATATCTATCTCGGACAC
GCAGCGCGATTGATGCGAATCTGTGGGTCCTTCAATGCGTGAGAAGCTTT
GTCTACCCATCACCAGTCAATGCTGTCAAGTTGTTGGATGTTTCAGGATT
GTTTTTTGAGCGAAGAAATGGTATTTGCTTTGAGGGTCGGCGAGTACCTT
CCTGTTCACTCTTCGTTCCATCATCGGTGTTTTTTTTGTGAGGAACGCGT
CAAACACATCATCGCATCATTTTTCGGGATAGATAACAGCTCCATCTGCT
ACGTCTGTCTGCGGCAGATATTCACATCTTTCCAGTACCGACCGGTCGCC
CCGGTGGTCTAGTGGTATCCTCGTATTCCCCTAGTCGCAGAGGTCGTCAG
TTCGAATCCCCACGTGGTGAAAAATTTACGACATATGCGGGTGAAAGCGA
AATATAGCTAGAAAGCTCTCGTGAGTACCAAACTTCGACGTTAGCACCTT
TGCCTAGGGAAAGATCGTCCCTGGACCCTTCTCGCGATAAAGAAAAAAAA
CAGCACGCACCGCAGGAGGAAGGTGGGGCATGAAAAGAAATAAAAAGAAG
AAAAAAGCCCTGGTATTTACCCCCTCCTGTGTGACCCTGGAAGGCTGTAG
TAAGAAAAAATACACTGAAAGTGTAGCACTCTACATACGCTGACAAGTAT
AGTACATCTCACCACGAAAAATGGGGGGATTGTCGCCATACTAAATAGGA
CGAAAACACACACACGCACACAACCAGGAAGGAGCAGTCACTTGGTATGC
ATGTGATACTTCTCATCAACGTTCGTGTTCACCTTACACGGAGAGCGGCG
GAGCAAACGAAGGACGTGGGGGGCGGTAGCCCCGCGTCCTGAGCTCTTGT
ACTGGTATACTACCTTCCCTATAAGACATGCATCACGACCACCGAAGAAA
AGGACGAAAATGCTTGGGGTGGACATGGACAGCTAGACAACTGGAAGGGA
GACTTGGGCGAATCAAAGTCGTTCGCGTAGTTTTCAGCAGCAGCAACAAA
CCCATGGCACATGTTGACGCAAGGTCGCGCGTCATGGATGGTGGGGCCCG
CACCGATGGTCCGGCACGCTCTTTTGGACGCTGCTCATTGTCGTGTATGT
ACCGGTCTCGCCTTGGTGGAATTGCTTGCTAAGATGAATACAGCGGTAGA
CTGTCGTATGAAACGTATGGATGATGTTGTTCAGATGATGTTGCTGCTGT
AGAAACACGTATACTTTCGAAGGGCCGGAAACAGTTCAGAGAAGCAGGAG
TAGTTAGATATACTACTATGTGGTTGGGGCCTAAACCATCACACGGAGGT
CACCATTGCCACGGTACATGTGTATGCAGGACTCCCTGCTGTGCAGCAAC
GCGGGAGGAACGAGTTCGACTGTTGTTTGATGGTGTGAACAAAAAATGGC
TCTAACCCATCATCAATCAGCTACTACTGCTGTACTTGTTGCTGCTGGTG
CTGCCGTGCGGACGTGCATTTCTACTTCTCTCGCGTATATGCTGCTAGCA
GAAGGCATTTAGTTCCAAGAATCGTTTCCGACGCCTCGTACGTATGATGC
ATTTGGGCGCACTTGGTATACAGCATGTATATCCGTCGTCAATTGTTCGT
CTCTGTTTCAGGAGTGGGTGCATCAACCGAATGTATCGGAAACAGTGCAG
CTACGAAACACAATCATGACTGCGGGTGCCTGTGCTAAGACTTGTCTGCA
GCAGCAGCGTTTCACTTGGCCCGGTGGCGTCGCATTGAAGTGCCCTTCGT
TCGGTCGCAAGAGGGATTCCATGAAGATAGTCTAGTTTTCCGTCGATCCA
CGACCCACCAAAAACCAAGTTGAGCACCCATGAATTTTCCCAAACTAGAA
CTTCGAAACGTATGACGACACGACCGCAATCCTGTGAGTATAAATATAAC
ATGATAAGAATCGTACAATATGCGGGAGAAGCGTAGAGAGACACAACGCG
CCTCTCACACCCGGGTGAAAAAGGTAGTTGAACACGGCGCCATGTATCCA
GGGTTGGCTCTATGTTGACAAGGACACCCCATCGCTTCGATTTGCTGCGT
CTTCGAAAGTACGATTGTTGGTGAGATTGTTGCCAACGTTTCCAGGAACG
CCGGCATGCGCTTGAGTGACGTTAAAATGCTGGCAAGTATTGTGTCGATC
TTTTATCTTCCCCCGCTCGCCTCCGTCAACGTCTGGT back to topCoding sequence (CDS) from alignment at Scaffold_614:152915..157651- >EsuBft652_11a-0001 ID=EsuBft652_11a-0001|Name=EsuBft652_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=630bp|location=Sequence derived from alignment at Scaffold_614:152915..157651- (Ectocarpus subulatus male Bft15b) ATGCTGCGGAGAGGTTTTGGCAAACTGGAGGAGTCGAGCACTGCTGACGG TGGCGACGGCGCAGAGACTAACGATCACTCGGGTGCATCCGCGACCAGTG GGAAGAAGTGCATCTTGAGGGGGCTAGCTGTGTGCAGCGCTGCGGTGCAG GACCAGGCAATAGCTCGGGCTCTCGAGATGCACGGGGAAGGCCTCCAAGT CCTTGACCTCGCCGGCTGCCGCGGTCTGGACACGTCATTGACGATGGAGG CGGTGCGGTCGCGGTGCAAACGCCTCGTCGCCTTGGACCTGTCCGGAGGG AGATCTTTCGAGGGCAAGGGGCGCGGAGAGATAGGATGCAACCCTTCCGT GGCGACGCCGAGGTGTGCGGTAGGCGGGACGTCATTTGAGGGGGAAGTTG GATTGGGTCTCAACCGGCGTCACCCGAGTTGCAGCCCATCGGTGGCCAGT CTTTCGATTCCGGAGAACAACCACCACCGACTGCGTGACTACCATCTGGT TTCGCTGCTGACCGGGCTTGGCGGCACACTTTTGTCCCTGCAGCTACGGG ATCGGCCGTTCATAACTGACCACGGAATCTGGGCCATCGCAGTCGCTTGC ACGCAGCTGCAGGAGTTGGACATCGGGTGA back to top
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