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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft928_5 |
| Protein domains | IPR011993 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Length | 305 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-02_002830.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft928_5a-0001 ID=EsuBft928_5a-0001|Name=EsuBft928_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3058bp|location=Sequence derived from alignment at Scaffold_611:72626..77723+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CGTCGTACGTCTCGTGCCTAGGTTCATAACACACACACACGCAACAGCAG CAATTGGCGTCGTTCGACGCACATTATGTCCGCCCACTTCGACGGGGGTG CGGAGATCGCCGGACGGAGGCTCCGAGAGGTGGAGGTCTCGTACGTGGAT GACCCGACGCTCGACATGGGCGCCGAGGACTCGGACGATTGCCCGGCCTC ACCGCCGCCGACCTACTACCTCCGCGTCCGCGAGGAGAACACGAGGAGGT CTACGGGAGGCGGCAGCGGTGGGAATCGTGATGATGATGCCGAGAGCAAT GGTGGACGGGCGGAGCAGGAGCAGGGCGAAGGGGGGGCTAAGGGCGAAGA CGACACCGACAAGGACGCAAACAACAACAACAACAACAACAACAACAATA GTTTAGACAGAGGGGCGAGGAAGAAGAAAAGAGCGAAGGACAAGGGTGGT AAGAAGGCGTGGGCTTGGCGGTACGTGAACGTGGAAAAGAAGAAACTCCT GGTTTGGGACAGGCGGGGTGGGCGACTGCTGAGGTCGATCTCTCTCAGGG ATATCGAGTCCCTCCTGGTGATTCCGGACGAGGGCGCGCCGGCCAGCATT CTCGAGGTGTACATTTCTTCCCCTTCCAACAGTGGTGGCGCAAGCAACGG TACTGTCACCGGCGACGGCAGCGAGAACAGTCCCATCGAAGGCGCCGGGG ATGAAGGGGAAGAGGAAGCGCAGCGCGCACGACGCCGGCGGCAACAAGAG AGCGGGGAGGGGGAAAGTGCTGGCGGGGGCGTTCTTGTCCTTCAGGCGCG GTCGAGGAGGGAGACGTTGCTGTGGGCCAAAGTGCTCCAGGAGAACGTCG AGCTCATGACGAAGCGCCAGGTACCGTTGGAGAACAGGGACGAGGAGACA AGTCTCAGCGATGTCCAACAGCTCGCAAAGCTCTTGACGCACCAGCTGTC AGAACTCCAGGACAGCGGTATCAACAACAGCAAGAACGACAACAACAAGC AGAGTAACAACAACCAGAGCGACAGCAAAGTCAACACCAGCAGTCCCGAA GCGCCCAAGCACCGCTTGGGCTTGTTCGGAGCGGACTCCTCGATTCCCGA AGGCGCAGATTACGGCACCACGCCGGAGAGCTAGCTCGATCAGAGCGAGT GGAAGTGGAGGAGGAGATCAAAGGAGGTGTGTGCGGTAAGGTAGCTGGCT CCAGGCGGACGGGCACCTTGTCCCACGCCCGCTCGCTGTGGTCGCAACGT ATCGGTGGAGACAGGGGAGAGCAGTGGATGTATTGTGTAAAGGGTTTTGT ATTGGTATGAGGCGTGTGCCGAGGGGGCCGGACGGAGCACGAACTAATGA TGTAACTTTTACGGGATTTTATTGGTGTTTTCTACATTGGAAATGTTTTT TTGGCCGGGAAAACACACTCGTCTCCAGGGAGCGATGTGCGTTGTTTCTT ATGGGTGCACACGCACGCCCTGCCTGCCCATGGGATTACATAGTCACTCT ACGGCACAACACTTAAGCATTCACCGGTGGTTGGGGGGGGAGACCCTCCA CTCCGCGCCGCAAGTCCATCTAGATGCTATTGTGTGGTGGCGGCAAATAT AGAAATGTCAATGGGCTGAATCCTTGCCGTTCGCAGAGAATACCCGGGGC GACCAAGCGCCGCCGCAGAGAGATGCTCGAGTTTTTGAGGGCAGGAGGAG TGTGAGGAGTGGAGTGGTTTGGAAACCACTGGGAGAGGAAGCAGTCCTTC TCTTCCGTGCGACCGACCCCGGTTGTGACCGTGTTATTTTTTTTTTCAGT TGCCGGCGACGAAAGACCGCAGCGTTGGTTGCAGAGGCGGGGGGGCGTAT GGGGGAGGTAACGAAAGTAACCGCGTGTTTTTGTTCAGTGTCAGGGACAC GAGAATGCAGCGTTGGTTGGAGAGACGCGAGGGGGGGGGGGCTTGTTGGG GGCGTGGTGGAAGTTGCCGCAGCGCTATACAATGCCCCCCCGACCCTGTG TCGTCCGAGGAGACCCTCTGTTCTCCGAGGAGCCAGCCACTCTGTTGTTC GGAAAGCCTTACCACAGTGGTCCGTGGGAAAGTCGTCGTTTCGTGGGGAC AAATCGACAGCAGTTGGTGGCCACGAGAGCAGCAGTCCCTCCGGTTGTCA ACATGTGTTGCGGAACACGGAGCGTTCTCTCGTTGTGTTACAGAGCGCGA CGCATTCTGCCAAAGTGTGTTGAGTCTTGTGAGAAAGGAACGGAACGCTA CCCTTGGGACCTGGACGACCAAGATGCGGGGTTGCGTGTACGTGTATACC GTTCACACGATGTAAGACGGCACACACCCTGGACCGATTTTTCAAGCTCG ATCACTCGGCAGAAAAGCGGTGACTGTGCTGGCAATGGTGGTCTGTGTTC CCCCCCCCTCTCGCCGAAAAGGGGATATGGCTCGCACCTTGTACGCAAGA CTCGAGAGTGGAATCAAGGTAGCGTGGCACACGGCCTCACCCCCTTCCTA TACGTGTTTTTTGGGACGAATACTTGTGTGTCTCGCCCAAGGGTCATCGC AGCATGGCCCTGAGCCAGGCGGCGGAATATACGTAGTAGCTGTCTGCGGC AATAGAAGAGTTTCTTGATCGCTATGAACAAGATGTGGACAGAACCCATC GCAAACTCTATCGGCGCAGCAAAGCGGTTCTTTGCACTCTCAGGCGAAGA TTGAAACCATTTCTTGATGGGCTTTCTGACAGTACGCCTCTTGAATGGGC TATTTTCCCGTCACCTCTCTTGAAAGTTTACTGCTATAGCAAGTGGCGGT AATTAGCAATAAATAGCGACTACTGTAGGGAGGAGTTCCTCTCGCTCCTT CGTGGTGGCAATCCAAGAGTCTCCACCTCGGCAGCCGCGGAAATGTTGGC CGCATGCATGGTCAGCAAAAAATCAAAACATTCTTACATACTTCTCCAGC CTATCGCTCTATCAATATGGCTCTCTCCTCCTTTTCGGCGTTGTTACGAT GCCCGGGAGCTCTGCAGCCTTGCCGTTGTTGTCAACATCTCCGACTGCCG GCGGTCGC back to topprotein sequence of EsuBft928_5a-0001 >EsuBft928_5 ID=EsuBft928_5|Name=EsuBft928_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=352bp
MSAHFDGGAEIAGRRLREVEVSYVDDPTLDMGAEDSDDCPASPPPTYYLR VREENTRRSTGGGSGGNRDDDAESNGGRAEQEQGEGGAKGEDDTDKDANN NNNNNNNNSLDRGARKKKRAKDKGGKKAWAWRYVNVEKKKLLVWDRRGGR LLRSISLRDIESLLVIPDEGAPASILEVYISSPSNSGGASNGTVTGDGSE NSPIEGAGDEGEEEAQRARRRRQQESGEGESAGGGVLVLQARSRRETLLW AKVLQENVELMTKRQVPLENRDEETSLSDVQQLAKLLTHQLSELQDSGIN NSKNDNNKQSNNNQSDSKVNTSSPEAPKHRLGLFGADSSIPEGADYGTTP ES back to topmRNA from alignment at Scaffold_611:72626..77723+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft928_5a-0001 ID=EsuBft928_5a-0001|Name=EsuBft928_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5098bp|location=Sequence derived from alignment at Scaffold_611:72626..77723+ (Ectocarpus subulatus male Bft15b) CGTCGTACGTCTCGTGCCTAGGTTCATAACACACACACACGCAACAGCAG
CAATTGGCGTCGTTCGACGCACATTATGTCCGCCCACTTCGACGGGGGTG
CGGAGATCGCCGGACGGAGGCTCCGAGAGGTGGAGGTCTCGTACGTGGAT
GACCCGACGCTCGACATGGGCGCCGAGGACTCGGACGATTGCCCGGCCTC
ACCGCCGCCGACCTACTACCTCCGCGTCCGCGAGGAGAACACGAGGAGGT
CTACGGGAGGCGGCAGCGGTGGGAATCGTGATGATGATGCCGAGGTGAAG
TCAAATGCCTGCTCGCTATTGTATTGAGCCCTGCTGCGTACATTCCTTGA
GAAAAAGTTCAGATACTTTTCAGCCCGTTACGCGCCCCGCTCGCATGTTT
TTCAAACCTCACCGCTAGGGTGTGGTATGTATGTAGTCTACACTGGAGTA
CCTCTCTTGGTACCTTATATCTGTGAGGTAGGGTCTGCTTTTCTGCTCTC
CAGCTCCTACTCCGGCGGGCCTTGATTCCATCGCAGGCTGCGTACTCCTG
CTCACTCTGTTGTAGCCTGATTCAGGCTCGTTTGTGGACCGACTGCTGCG
GATCTTTGGGTCGCGTATTCGACAGCAGCACTCAGCAGGAAACTCCCCCT
CCGGACGAGATGGTGTTGGGGCGAATGGCAACATTTCAGGCATTTGGAAG
AACTCTTCCGCCGCCTGCGTAGAAGTGGAGTACTGCATCCACAATGCGTC
TTTTTTGTTTCTCGTTATACATAGCTATTGTTTCTTGGTCCACCTCTCGA
CAGAGCAATGGTGGACGGGCGGAGCAGGAGCAGGGCGAAGGGGGGGCTAA
GGGCGAAGACGACACCGACAAGGACGCAAACAACAACAACAACAACAACA
ACAACAATAGTTTAGACAGAGGGGCGAGGAAGAAGAAAAGAGCGAAGGAC
AAGGGTGGTAAGAAGGCGTGGGCTTGGCGGTACGTGAACGTGGAAAAGAA
GAAACTCCTGGTTTGGGACAGGCGGGGTGGGCGACTGCTGAGGTCGATCT
CTCTCAGGGATATCGAGTCCCTCCTGGTGATTCCGGACGAGGTGGGAAAA
TGAAGAGAGGTTGGGTTAGCAGGAGTAGGAGAGAGAAAGAGGGGCGCGGG
GGGAGAGGAGCGTGTTAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAAAGAAAGAGAGAGAACGTTTGAGATTAAAGTGGTAGTTCGAAGACC
GAGGTTGGTTCGACACCCTGAATCGAGTTTGGCTTCTTAAAGGGGAAGTT
ACGAGACGTGTGTGAGCGAGAAACCAGGGTAGATAGGCGAGCAGAGACAG
ACGAGAGGAGAGAAATATGGAGAGAACGAAGAGAGAATATGTGGAAAGAA
GTCTCCACCATGTGCAATTACACCGAAACCACCCTAATCGTCGGAGCATC
GCGTGCTCGGGTGATGTGCGTCGCTGATCGGTGTCCAAGAGACCGGCATG
CCACTGCTCTCGTACCTACGGGGCTCAGCAGACCGCCCCCCCCACTCCCC
GACTCTCGCTCCTTTCATCACGACGGTGTCCTCCGATTCTATCCCGCTTG
CTCAAGTGCTGTCGTCGTCACAACAGTACGATTCCGCGGTGCCCCCGATC
CTTCCATATACAACCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGTTTTTTTTTTGGCGGTAACCATAATGGTG
GTCGAGTAGATCATGTTGTGCTGGGTCGAGAACCCTCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCC
CCCCCCTGTGTCCTCTCCCACCCTTGGTGAACTACGAACCGGAAAAACGG
TCAGGGCGCGCCGGCCAGCATTCTCGAGGTGTACATTTCTTCCCCTTCCA
ACAGTGGTGGCGCAAGCAACGGTACTGTCACCGGCGACGGCAGCGAGAAC
AGTCCCATCGAAGGCGCCGGGGATGAAGGGGAAGAGGAAGCGCAGCGCGC
ACGACGCCGGCGGCAACAAGAGAGCGGGGAGGGGGAAAGTGCTGGCGGGG
GCGTTCTTGTCCTTCAGGCGCGGTCGAGGAGGGAGACGTTGCTGTGGGCC
AAAGTGCTCCAGGTACAGTAGGTTTTTGTTGCTAATTCTGCTGTTATCAG
ATTTTGAATATTCGGAGATGAATCACCATCGTTCTCATTTGTCTTTTATC
ATTTTTTTTTTGCCGTTTTGCATTGTCTATTGTTGTCGATTCCTTGTCGC
GCGCATGTGTGCAATGCTGTTGACTTTTCGTGTGGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCC
CCCCTTCTTTCCCCGACTGCGCTCCCCGTCTTGTTCCTGCACCGGCGTTC
GTCTGTGAACACCGCTCGATCGCTGTGTTCTGCACAGGAGAACGTCGAGC
TCATGACGAAGCGCCAGGTACCGTTGGAGAACAGGGACGAGGAGACAAGT
CTCAGCGATGTCCAACAGGTGTGTGGGAGACCAGTACGCCAATAGACCGT
CGAGAACCCCGTGCCTTTCCCCCTTCCCCTCCCGTATACCACCTTCAATA
ATACGTTGTGCTGCCAGAGATGAATAAATATGTACAGAGAGGTAATAGAG
GTAGATATAATAGAGAAGCGATAGAAAGAGGGAGACAGCGAGATGTTTTC
TTACTCGTCACTTACGCGCGTGGATTTCTTGTTTTTGCGCCCGGTGGTGG
TTGATTGCTTCGTGCCCTCCGTTGTCTCTTTGCCGCTGCACTTCCTTCTC
GGTTTCCGCAGCTCGCAAAGCTCTTGACGCACCAGCTGTCAGAACTCCAG
GACAGCGGTATCAACAACAGCAAGAACGACAACAACAAGCAGAGTAACAA
CAACCAGAGCGACAGCAAAGTCAACACCAGCAGTCCCGAAGCGCCCAAGC
ACCGCTTGGGCTTGTTCGGAGCGGACTCCTCGATTCCCGAAGGCGCAGAT
TACGGCACCACGCCGGAGAGCTAGCTCGATCAGAGCGAGTGGAAGTGGAG
GAGGAGATCAAAGGAGGTGTGTGCGGTAAGGTAGCTGGCTCCAGGCGGAC
GGGCACCTTGTCCCACGCCCGCTCGCTGTGGTCGCAACGTATCGGTGGAG
ACAGGGGAGAGCAGTGGATGTATTGTGTAAAGGGTTTTGTATTGGTATGA
GGCGTGTGCCGAGGGGGCCGGACGGAGCACGAACTAATGATGTAACTTTT
ACGGGATTTTATTGGTGTTTTCTACATTGGAAATGTTTTTTTGGCCGGGA
AAACACACTCGTCTCCAGGGAGCGATGTGCGTTGTTTCTTATGGGTGCAC
ACGCACGCCCTGCCTGCCCATGGGATTACATAGTCACTCTACGGCACAAC
ACTTAAGCATTCACCGGTGGTTGGGGGGGGAGACCCTCCACTCCGCGCCG
CAAGTCCATCTAGATGCTATTGTGTGGTGGCGGCAAATATAGAAATGTCA
ATGGGCTGAATCCTTGCCGTTCGCAGAGAATACCCGGGGCGACCAAGCGC
CGCCGCAGAGAGATGCTCGAGTTTTTGAGGGCAGGAGGAGTGTGAGGAGT
GGAGTGGTTTGGAAACCACTGGGAGAGGAAGCAGTCCTTCTCTTCCGTGC
GACCGACCCCGGTTGTGACCGTGTTATTTTTTTTTTCAGTTGCCGGCGAC
GAAAGACCGCAGCGTTGGTTGCAGAGGCGGGGGGGCGTATGGGGGAGGTA
ACGAAAGTAACCGCGTGTTTTTGTTCAGTGTCAGGGACACGAGAATGCAG
CGTTGGTTGGAGAGACGCGAGGGGGGGGGGGCTTGTTGGGGGCGTGGTGG
AAGTTGCCGCAGCGCTATACAATGCCCCCCCGACCCTGTGTCGTCCGAGG
AGACCCTCTGTTCTCCGAGGAGCCAGCCACTCTGTTGTTCGGAAAGCCTT
ACCACAGTGGTCCGTGGGAAAGTCGTCGTTTCGTGGGGACAAATCGACAG
CAGTTGGTGGCCACGAGAGCAGCAGTCCCTCCGGTTGTCAACATGTGTTG
CGGAACACGGAGCGTTCTCTCGTTGTGTTACAGAGCGCGACGCATTCTGC
CAAAGTGTGTTGAGTCTTGTGAGAAAGGAACGGAACGCTACCCTTGGGAC
CTGGACGACCAAGATGCGGGGTTGCGTGTACGTGTATACCGTTCACACGA
TGTAAGACGGCACACACCCTGGACCGATTTTTCAAGCTCGATCACTCGGC
AGAAAAGCGGTGACTGTGCTGGCAATGGTGGTCTGTGTTCCCCCCCCCTC
TCGCCGAAAAGGGGATATGGCTCGCACCTTGTACGCAAGACTCGAGAGTG
GAATCAAGGTAGCGTGGCACACGGCCTCACCCCCTTCCTATACGTGTTTT
TTGGGACGAATACTTGTGTGTCTCGCCCAAGGGTCATCGCAGCATGGCCC
TGAGCCAGGCGGCGGAATATACGTAGTAGCTGTCTGCGGCAATAGAAGAG
TTTCTTGATCGCTATGAACAAGATGTGGACAGAACCCATCGCAAACTCTA
TCGGCGCAGCAAAGCGGTTCTTTGCACTCTCAGGCGAAGATTGAAACCAT
TTCTTGATGGGCTTTCTGACAGTACGCCTCTTGAATGGGCTATTTTCCCG
TCACCTCTCTTGAAAGTTTACTGCTATAGCAAGTGGCGGTAATTAGCAAT
AAATAGCGACTACTGTAGGGAGGAGTTCCTCTCGCTCCTTCGTGGTGGCA
ATCCAAGAGTCTCCACCTCGGCAGCCGCGGAAATGTTGGCCGCATGCATG
GTCAGCAAAAAATCAAAACATTCTTACATACTTCTCCAGCCTATCGCTCT
ATCAATATGGCTCTCTCCTCCTTTTCGGCGTTGTTACGATGCCCGGGAGC
TCTGCAGCCTTGCCGTTGTTGTCAACATCTCCGACTGCCGGCGGTCGC back to topCoding sequence (CDS) from alignment at Scaffold_611:72626..77723+ >EsuBft928_5a-0001 ID=EsuBft928_5a-0001|Name=EsuBft928_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1059bp|location=Sequence derived from alignment at Scaffold_611:72626..77723+ (Ectocarpus subulatus male Bft15b) ATGTCCGCCCACTTCGACGGGGGTGCGGAGATCGCCGGACGGAGGCTCCG AGAGGTGGAGGTCTCGTACGTGGATGACCCGACGCTCGACATGGGCGCCG AGGACTCGGACGATTGCCCGGCCTCACCGCCGCCGACCTACTACCTCCGC GTCCGCGAGGAGAACACGAGGAGGTCTACGGGAGGCGGCAGCGGTGGGAA TCGTGATGATGATGCCGAGAGCAATGGTGGACGGGCGGAGCAGGAGCAGG GCGAAGGGGGGGCTAAGGGCGAAGACGACACCGACAAGGACGCAAACAAC AACAACAACAACAACAACAACAATAGTTTAGACAGAGGGGCGAGGAAGAA GAAAAGAGCGAAGGACAAGGGTGGTAAGAAGGCGTGGGCTTGGCGGTACG TGAACGTGGAAAAGAAGAAACTCCTGGTTTGGGACAGGCGGGGTGGGCGA CTGCTGAGGTCGATCTCTCTCAGGGATATCGAGTCCCTCCTGGTGATTCC GGACGAGGGCGCGCCGGCCAGCATTCTCGAGGTGTACATTTCTTCCCCTT CCAACAGTGGTGGCGCAAGCAACGGTACTGTCACCGGCGACGGCAGCGAG AACAGTCCCATCGAAGGCGCCGGGGATGAAGGGGAAGAGGAAGCGCAGCG CGCACGACGCCGGCGGCAACAAGAGAGCGGGGAGGGGGAAAGTGCTGGCG GGGGCGTTCTTGTCCTTCAGGCGCGGTCGAGGAGGGAGACGTTGCTGTGG GCCAAAGTGCTCCAGGAGAACGTCGAGCTCATGACGAAGCGCCAGGTACC GTTGGAGAACAGGGACGAGGAGACAAGTCTCAGCGATGTCCAACAGCTCG CAAAGCTCTTGACGCACCAGCTGTCAGAACTCCAGGACAGCGGTATCAAC AACAGCAAGAACGACAACAACAAGCAGAGTAACAACAACCAGAGCGACAG CAAAGTCAACACCAGCAGTCCCGAAGCGCCCAAGCACCGCTTGGGCTTGT TCGGAGCGGACTCCTCGATTCCCGAAGGCGCAGATTACGGCACCACGCCG GAGAGCTAG back to top
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