EsuBft969_5a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft969_5a-0001
Unique NameEsuBft969_5a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_565contigScaffold_565:251950..255401 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LSL3
ProteomeIdEsuBft969_5
Protein domainsPTHR13539
Protein domainsIPR029063
Protein domainsIPR019410
Ownerapollo_admin@sb-roscoff.fr
Notecalmodulin-lysine n-methyltransferase os:mus musculus gn:camkmt pe:1 sv:1 [Automatic annotation]
Nb exon4
Max annot lvl2759|Eukaryota
Length687
Hectar predicted targeting categoryother localisation
Evalue5.97e-118
EggNOG OGsCOG1072@1|root,KOG3201@1|root,KOG2702@2759|Eukaryota,KOG3201@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
Preferred nameCAMKMT
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K18826,ko:K21804
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,map00310
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006417,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008277,GO:0008757,GO:0009889,GO:0009966,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0010646,GO:0016043,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018025,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0022400,GO:0023051,GO:0031072,GO:0031323,GO:0031326,GO:0032101,GO:0032259,GO:0032268,GO:0032991,GO:0034248,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0140096,GO:1901564,GO:2000112
EC2.1.1.60
Descriptioncalmodulin-lysine N-methyltransferase activity
COG categoryF
BRITEko00000,ko00001,ko01000,ko03110
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft969_5aEsuBft969_5aEctocarpus subulatus male Bft15bgeneScaffold_565 251950..255401 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft969_5a-0001EsuBft969_5Ectocarpus subulatus male Bft15bpolypeptideScaffold_565 251950..255350 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft969_5a-0001-exonagat-exon-72368Ectocarpus subulatus male Bft15bexonScaffold_565 251950..252136 -
EsuBft969_5a-0001-exonEsuBft969_5a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_565 252500..252660 -
EsuBft969_5a-0001-exonagat-exon-72366Ectocarpus subulatus male Bft15bexonScaffold_565 254909..255017 -
EsuBft969_5a-0001-exonagat-exon-72367Ectocarpus subulatus male Bft15bexonScaffold_565 255172..255401 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft969_5a-0001-cdsEsuBft969_5a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_565 251950..252136 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft969_5a-0001-exonagat-five_prime_utr-15362Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_565 255351..255401 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft969_5a-0001 ID=EsuBft969_5a-0001|Name=EsuBft969_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=687bp|location=Sequence derived from alignment at Scaffold_565:251950..255401- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GAAGGGCACAAGGGGCGACACCACCGGGCGTCACAGCACAGAGTAAGCAC
CATGTGCGATAGCGGTACTTCTGTTCGAGGTAATGGAGGTGGCAAGTGGT
CGACCCTTCGAGACGCATTTCTCTGTGCGGTGGCAGCGTCCAAAAGAGGG
CATGCCACGGAGACTGGTGGCAACGGGGCGAATGACAGCACCATATCCTC
GAGGTTCGAGGGCTTCGTTCTTTTCCCCAGACAAGAGATTGACCCAACGT
CAGCGGTAGCGGCAGCTACACAAACTGCAACGACGGCCATCCACCCAGGC
AATGTTTGGGCTACGTATCACCTTCCTGGTGGGAAAAAGGTCACGACGAG
GGAAGCTTCGTCAAACGGAAGGGCGGGTGCGGGTGGGGTAACCGTTACGC
TGGATCAGCTGTTTGCGCACCGCGTGCACGGCGTCGACAACACAGGCAAC
GTCAGAGTATGGCCGGCGGAGCACGTTCTGCTCCACGTCTTGCTCTCTAG
CCCGCTGGCCTCCTCGCTGGGCGGGATGCGAGTGCTGGAGCTCGGGGCGG
GCATGTCCGGGTTGGCCGGCTTGGGTGTGGCCGCTTGCTTGGACGCGGCA
GAGGTTGTGATCACGGATGGCAACCCGGACGCACTTAGAAATCTCGAGGT
ACAGCAACGTGCGCATCGTGGCCTTTTCATTCAATAA
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protein sequence of EsuBft969_5a-0001

>EsuBft969_5 ID=EsuBft969_5|Name=EsuBft969_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=211bp
MCDSGTSVRGNGGGKWSTLRDAFLCAVAASKRGHATETGGNGANDSTISS
RFEGFVLFPRQEIDPTSAVAAATQTATTAIHPGNVWATYHLPGGKKVTTR
EASSNGRAGAGGVTVTLDQLFAHRVHGVDNTGNVRVWPAEHVLLHVLLSS
PLASSLGGMRVLELGAGMSGLAGLGVAACLDAAEVVITDGNPDALRNLEV
QQRAHRGLFIQ
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mRNA from alignment at Scaffold_565:251950..255401-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft969_5a-0001 ID=EsuBft969_5a-0001|Name=EsuBft969_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3452bp|location=Sequence derived from alignment at Scaffold_565:251950..255401- (Ectocarpus subulatus male Bft15b)
GAAGGGCACAAGGGGCGACACCACCGGGCGTCACAGCACAGAGTAAGCAC
CATGTGCGATAGCGGTACTTCTGTTCGAGGTAATGGAGGTGGCAAGTGGT
CGACCCTTCGAGACGCATTTCTCTGTGCGGTGGCAGCGTCCAAAAGAGGG
CATGCCACGGAGACTGGTGGCAACGGGGCGAATGACAGCACCATATCCTC
GAGGTTCGAGGGCTTCGTTCTTTTCCCCAGGTGTGTTGTGCACAGAGGAC
ATGAGTTTGTCCCCCTTCCTGCCCGAGGGTCACTGGAGGCTCCTACCTTC
CTTGCATAGGTCCATCTCTTGTTTGCGTTCGCACCTCAACTTGACCCCCG
TGCCTCACAACGTATGCCCGGGTTTGCTGGCCAGACAAGAGATTGACCCA
ACGTCAGCGGTAGCGGCAGCTACACAAACTGCAACGACGGCCATCCACCC
AGGCAATGTTTGGGCTACGTATCACCTTCCTGGTGGGAAAAAGGTATCGA
CTGTCTACAGTTCTGTGGCTGGAAGTTGTTCCGATTTGCGAGTGCATGCT
TGCAACTTGATGTCTAGTCTAGGTAAATGCCACGAATCACGCGTTGTACT
GCTATACCAGGTATGCTGGTACAGGAGTACGAGGTAATTGCTCTCACGAA
CGACTACGGAGTTTGCGAACATCGGCATTCGATTTGATTTCCATCTTTTT
CATCCACCCGAGCGCCGAAGACGGCTGGATATTTAGGAATTTGATCGTTC
GCTTTTACAAATCGCCCCTTACGACCGCAGGAAAGCTCCAATTCCACCTT
GCTCACATCTATCTTTTTTGGAACAGTTGCTGGTTGGCCTACACTCCCCG
AGATACTCCCGATGTCCTCCCGACACATGACCCACCAGCCCGTGAGGCTA
GCTATGCACCCACACCTCGGCCGTGATACACTACACCACGACCATGGCAA
ACCAAAACTTTACAGTACCGCAAGGCAGTTAAGACAGTTGTCACTGTACG
CCAGACCCGATCCAATGCATGCTGCCGACATGGTGCATTCCTCGTTGGCG
CAGCACCTCACAACACACGCTCAGTTGTTTGTGTACAGATTGATTGTTGT
TCAACTTGTTCAAACGACAAACGACACACACACACGCTGCTCAGAAAGAA
AGGAAGAAGTTCACGCGTTGCGCAGCACGCGCTATTACTACACCTCTGTT
TCCAGAGTTAGCCTACCCCCGACAACCAACAGACGTTGCAAATACTGTAG
CTCAGAGGAAGAACGGCGCATCCGAAAGGTTCCGTGGCGATCGGCGTTTA
CAGAACTGCGTGGTCTAGAGTAATAGTGTGGTGTGTCGTGCGCTCGCCAG
CGAAATCTCGCAAGGAGCCAACATGCACGGTGTTTACAGCAATCGTTGTT
GGTGATTTGCCTCCAGCGACAGAGCGCAATAATAATACTGTAATACGGAT
CATCTCTGTTCGATGGCTAATCGCACTCAGTGGAAGGAAGTTTGTTTGAC
AGCGTATACATGCTAGGCAGAGCTCTGCACGGACGAAGTAGAAGCGTAAG
TTCCTCCGTGCATGCATGTCTAAACGTGAGCAGAAAAAGAAAAGGGGGCA
AACAGCTACCATTTGGTGACGTCACATCGCATGCCTTCTCGAAAACATCA
CACTCGGGTCTTCGCAAGCTGATTTTGAAATCAAATTTTGATCTCACGTC
TGTCTTCCTTCGGACTTCCAAGATCAAATCAAAACACCAGTCCGCAAACA
CCCGACTGACTGTACGGCCGCAAAGTGAGAGCTCGACCATATCCAATGCA
GCGCAGCCCTCTGTAGAGATCACCTTCGTAAAAAGCTACCATCTCCCAAC
CTCTGTCGAGGACGACTCCCAGTTTTCACATCGGCGTTGGTGAAGAGATT
CAACAGCTCCATGGCACCGCCGCCGACCATCATGAACGCCATCTCGCCGT
GGAGAGTTTCGTCTCCGACCAGGACGCCTGCGTGTCGAGAGGGGGCGCGT
ACTCCGGACAGCGCGGTCGTGACTCGCGGAAACCCTACGAACACGACTGA
AGTCAATGGCAGGATTCGACGGGCGATGGACACCGAAAAGTATCCCATGC
GGACGGCGCGAAAGGCAAAAGAACAAAAGAAGCTGACAATTCCGTGCCAC
CCGCAAAGGATACTTTGCGTTTTCCATGACCGGCCGAATCCTGCCATCGA
CTTCAGTCGTGTTTGTCGGTTTTCCGTGAGTCACGATCGCGCTGCCCGGA
GTAAGCGCCACCGCTTTTCACGAACGCGTGCTACTCTGAGATGAAGCTCC
ATGTCGGCGTCACCAATGACCTGTCTGCTTTTTTTGGAAGAAATCCGGGT
TCACCTGTTCCGACATTGGACGATTCCCTCGTTTCACACCTCCAGTTTTT
TTTTCTTCTCGGATCCCAGGCCTGTTGTAGGATAGCGTACGATCATAGTC
TGCGCGCTCGAAAGAAGACGGTGTTTCAAGGTAGCAGCAAAGAGCGTTCA
TTGACCACGATCGACTTGTCGCCGTTGCACGAAACGTGCACACCTTGCTA
GATGCACTTGTATTCGAAGGCCTTTCAATGCATGCCGCCACCGTTTGGAT
CAGGAATTCATTAGTAACTCAGGATTCCATTCGGACAGCACAAACTCTTG
CCGCGGTCGGGCATATTACCTCTGGCACAATGGCCGCTACAACCATGGCG
TGTGGCCAACCTTTTGTCTGCTATGGTCCATGGCACTTTAGGTCACGACG
AGGGAAGCTTCGTCAAACGGAAGGGCGGGTGCGGGTGGGGTAACCGTTAC
GCTGGATCAGCTGTTTGCGCACCGCGTGCACGGCGTCGACAACACAGGCA
ACGTCAGAGTATGGCCGGCGGAGCACGTTCTGCTCCACGTCTTGCTCTCT
AGGTCCGTGTGTTGCCTTGCTTTTTTTGTTTTCTTTCGCCGGCGGACGAC
CCTTATCGACTGCAATGTGTCACTCACAAACAGCCGCGAAAAACGAGTTA
AACATGCCGCGATCCTTTTTTATCCCTTTGAACCGAGTGAAGTAAAGGGT
CATCAAACGAACGTAAAACGCTGAGTGTCTCTCCATAATACCTCCGTTCA
ACCCATATGTGCGGGTTGGTTGTTCTCTGCACAGTTTCTCGCGTTGTCGA
TATAGATGCCAGCCACCCACTCTCTCGTCCGATGCCCGTCTCGTTGCCAT
CTCGCCCCTTGGTTCTCCCTTGCGCGAAAACCGCCTGGCCTTCCTGCCGT
TGTCGCGCCGACTAGCCCGCTGGCCTCCTCGCTGGGCGGGATGCGAGTGC
TGGAGCTCGGGGCGGGCATGTCCGGGTTGGCCGGCTTGGGTGTGGCCGCT
TGCTTGGACGCGGCAGAGGTTGTGATCACGGATGGCAACCCGGACGCACT
TAGAAATCTCGAGGTACAGCAACGTGCGCATCGTGGCCTTTTCATTCAAT
AA
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Coding sequence (CDS) from alignment at Scaffold_565:251950..255401-

>EsuBft969_5a-0001 ID=EsuBft969_5a-0001|Name=EsuBft969_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=636bp|location=Sequence derived from alignment at Scaffold_565:251950..255401- (Ectocarpus subulatus male Bft15b)
ATGTGCGATAGCGGTACTTCTGTTCGAGGTAATGGAGGTGGCAAGTGGTC
GACCCTTCGAGACGCATTTCTCTGTGCGGTGGCAGCGTCCAAAAGAGGGC
ATGCCACGGAGACTGGTGGCAACGGGGCGAATGACAGCACCATATCCTCG
AGGTTCGAGGGCTTCGTTCTTTTCCCCAGACAAGAGATTGACCCAACGTC
AGCGGTAGCGGCAGCTACACAAACTGCAACGACGGCCATCCACCCAGGCA
ATGTTTGGGCTACGTATCACCTTCCTGGTGGGAAAAAGGTCACGACGAGG
GAAGCTTCGTCAAACGGAAGGGCGGGTGCGGGTGGGGTAACCGTTACGCT
GGATCAGCTGTTTGCGCACCGCGTGCACGGCGTCGACAACACAGGCAACG
TCAGAGTATGGCCGGCGGAGCACGTTCTGCTCCACGTCTTGCTCTCTAGC
CCGCTGGCCTCCTCGCTGGGCGGGATGCGAGTGCTGGAGCTCGGGGCGGG
CATGTCCGGGTTGGCCGGCTTGGGTGTGGCCGCTTGCTTGGACGCGGCAG
AGGTTGTGATCACGGATGGCAACCCGGACGCACTTAGAAATCTCGAGGTA
CAGCAACGTGCGCATCGTGGCCTTTTCATTCAATAA
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