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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LQF3 |
| ProteomeId | EsuBft1108_3 |
| Protein domains | IPR029033 |
| Protein domains | SignalP-TM |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | IPR005952 |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | IPR001345 |
| Protein domains | IPR013078 |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | -bisphosphoglycerate-dependent phosphoglycerate mutase os:chlorobaculum parvum (strain ncib 8327) gn:gpma pe:3 sv:1 [Automatic annotation] |
| Nb exon | 7 |
| Max annot lvl | 2759|Eukaryota |
| Length | 197 |
| Hectar predicted targeting category | mitochondrion |
| Evalue | 9.33e-216 |
| EggNOG OGs | COG0588@1|root,KOG0235@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG rclass | RC00536 |
| KEGG ko | ko:K01834 |
| KEGG Reaction | R01518 |
| KEGG Pathway | ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 |
| KEGG Module | M00001,M00002,M00003 |
| EC | 5.4.2.11 |
| Description | regulation of pentose-phosphate shunt |
| COG category | G |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0004619 |
| GO | 0006096 |
| EC | 5.4.2.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1108_3a-0001 ID=EsuBft1108_3a-0001|Name=EsuBft1108_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1974bp|location=Sequence derived from alignment at Scaffold_419:41864..47615- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACAATTGCAGGGTTCTTAGCTCCCTCCGTGGTGGCTAGAGGGCGCGT GCAGTCGGCGGCGGCGGCGGCGGCGGCAGTCCGCCTGGGCGACAATGCGG CGACATTGCGCTCGGTTCGGGGGGCAAGGAGCGGCATGTCGATGGCCTCG CCCGAGACCACGCCAGAGGGGGATGACACCTACACCCTCGTAGTAGTTAG GCACGGCGAGAGTACATGGAACAACGAGAATCGTTTTACGGGGTGGAAGG ACGTGCCTCTGTCGGACAAGGGTAAGGAGGAGGCCGCCCAGTCCGGCGAG CTCATCGCCGAGTCGGGCTTGACGTTCGACGTCGCGTACACGTCAGTGCT CAAGCGAGCAATCAACACCCTGTGGTGTATCCTCGAGAAGACCGACCTTA TGTGGATCCCGGTGATCCGATCGTGGCGCCTCAACGAGAGACACTACGGT GCCCTCCAGGGTTTGGACAAGAAGGAGACCGTTGCGAAGCACGGAAAGGA CCAGGTCATGATCTGGCGCAGGAGCTACACCACTCCGCCTCCTCTCCTCG CTGACGATAGCGATGACCTTCCTCAGTACGACCGCAAGTACGCTGGGGTG GATCCGGCAGACCTCCCGCGGGCGGAATCTCTCAAGTTGACGAAGGACCG TTTCCTGGTGGAGTGGGAGAACGAGATCGCCCCTGCCATCAAGAGCGGGA AGCGGATTCTTATCGTGGCCCACGGCAACACCATCCGCGGGCTGTGCCAG CACCTGGATGAGATATCCGACGAGGACATCGTCGGCTTGGACATCCCCAC CGGTGTGCCGCTCGTGTTCACGCTGGACAAGGACCTCAAGCCCATCACAC ACCCGGAAGCTATCCCCCCGCTGTCCGCCCGCTACCTCGGGGATGTTTCG GGAATCCGCGAAAGGATCGAGGCGGTCAAGGCGCAGACCAAGTAACAGCA GTTCGAGTACCGAGTACATCATTCAAGACCAGAATTTTTAACAGTGGCGT TTCGATGTTTTTGCGTTCTTGAGCTTGCAGGATATGGCGGTTGGACATGA AAGGACATGTTTTATAGTTGACTACTACTGTTCAGAGGCAGACGCGGAAA TTCGGGCGGGGTACTGGAGAGGGGGGGGGGGGNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGG GGGGTTGATGCAGATTGCGGCACCATGTAATGTAGTACATGTAGTGCAGT ACTTTGTCTCCTTCCAACCGATGGGTGTCAAAAGCATCAGTCTTCATGTA TATTATCTCTGAATTATTTTTTATTGTTTGTCGTCTTAGCCCGTTTGGTT GTCTTGTGTGTTGTGGTTTTGTGGCTTCCTTTTTTGTTGTCTTAGACCCG TCGACCGGACGGTGGGTTTCCTCCGAGGCTGCTACACACATTCACCGCAC GCTGCACCATACTAGATGAAGCTATAGCAGCGCGATGCGATTCATACAGT CATGGAGATTTTTTTCCACAACAATTGCGTGGCTTATTTCGACGGCTTGC CTGTCCTTAAGGCGCCAGCACAGATTGGCGATGGATGGTGGGGTGGTCAC CAAGGAAGAAGTCTTGGCTACCTTTGTAGACTACACCAGACCAGTGTTCA ACACACCGCGGGGGGAGTTGCCACACGCATGCCCCCGGCGGAGTGATGCT TCATTTTGCACGCTTTTCTCGACACCAAATCACTGATCTTTCTGGGGGGG GCGTTTAGTGTGAAGCCTCCTCGACGCCAAACGCTCTAGGAATATTGATA AAAATTCGGCGAAGTACTCCGTAGATCACGCTAAAAGTACAAATGATTTG GTTCTGTCAGCACATCATGTTTGTTTTACGTGGGATGCGGACTACAAACG TCAAGAACTTCACGTCGCTTCGAA back to topprotein sequence of EsuBft1108_3a-0001 >EsuBft1108_3 ID=EsuBft1108_3|Name=EsuBft1108_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=314bp
MTIAGFLAPSVVARGRVQSAAAAAAAVRLGDNAATLRSVRGARSGMSMAS PETTPEGDDTYTLVVVRHGESTWNNENRFTGWKDVPLSDKGKEEAAQSGE LIAESGLTFDVAYTSVLKRAINTLWCILEKTDLMWIPVIRSWRLNERHYG ALQGLDKKETVAKHGKDQVMIWRRSYTTPPPLLADDSDDLPQYDRKYAGV DPADLPRAESLKLTKDRFLVEWENEIAPAIKSGKRILIVAHGNTIRGLCQ HLDEISDEDIVGLDIPTGVPLVFTLDKDLKPITHPEAIPPLSARYLGDVS GIRERIEAVKAQTK back to topmRNA from alignment at Scaffold_419:41864..47615- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1108_3a-0001 ID=EsuBft1108_3a-0001|Name=EsuBft1108_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5752bp|location=Sequence derived from alignment at Scaffold_419:41864..47615- (Ectocarpus subulatus male Bft15b) ATGACAATTGCAGGGTTCTTAGCTCCCTCCGTGGTGGCTAGAGGGCGCGT
GCAGTCGGCGGCGGCGGCGGCGGCGGCAGTCCGCCTGGGCGACAATGCGG
CGACATTGCGCTCGGTTCGGGGGGCAAGGAGCGGCATGTCGATGGCCTCG
CCCGAGACCACGCCAGAGGGGGATGACACCTACACCCTCGTAGTAGTTAG
GTCAGTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCGCGATTGCTCTC
TTTCGGTGTTACGTACATATCAGGTTTCTGCTGTTTAGTATTCTCTAGTT
CTCGTCGACATTGTTTCTGAGCCCCACTCTGTCGTTATATGTTTGGGGCT
TTTCTCTTTTTTTTTCCCCTTGTGAAAAGAGGGAATCGTCCTGGACAGAT
GATATGTTGGGCGGATGGGACACTCTTTCCCCTTTTGAAAGGTCACCACC
TCCTCCACTCACTCTTGTTTTTGTGAGGCTTGTTGCAGTAGTAGTCTGCT
TGTCTCTCGAGGACGTTGTAGGTTTTCTGCCCGATGAATTTTTCACCTTT
GGCGTTCTTTACCCAGTTTACACACCTGTATCATCTGCCTTCGGAGTTCG
TCTAGCTAGAAAATGAAAATCGGACGTGCGTGATTTCTCGTACAAATACG
TATTTTGGGCGTACGTGACTTATGGCACATGCTCACATTTTTTTGTTTTC
TTTTTCTTTGTGCGGCGTTGAGGCACGGCACCAACTATGTTCATGATTGT
GGTCGGAACCAGGTACGGGGGTGAAAAACGAGTAAGAACGTCCCCGACCG
GGTAGACTACGCGATACTGTTGCTATGAAAGAAGTTTGTTCCGACGACAA
TGTTAATGCTTAGGTACGCCAACCCAGGTTACTCTGTTGCTTTGTCGTCG
GAACAAACTTCTTTCATAGCAACAGTATCGCGGAGTCTACCCGGTCGGGG
ACGTTTTTACTGGTTTTAAACCCCCGTACCTGGTTCCGACCACAACTATG
AAAATTCACAAATTCACCCTATAACAGCCCGACCTGTAGCGACGCCACGG
GTGCGCAAACCTCAACCCCAAAATGCAGACACAAACGCTGTTTGTAGCCT
CTTACCCTCTCTTAAGATTCACTTGCCCAGATGACGGTGACAAGCGTCAC
GAAAGGCGAACCGTCACACGTAACACTCACCTACCTGGTGGTTTAAAGAT
AGATGCTGGTGAAGCAACCGTCCCCTTCTGGGTGCGGTTCGATACGCAGC
AACCACGCAATGGGCAAAGCACGACCCAACGCAACCCCCCCCCTAGCTAC
AACCACAGTTGCCAACATTGTCGAACGCCGAACATGGAGTTCGTACGTAA
GATGGCAATGGTGTCGAACGACTTGATGTGGTGCTTTTTCTTTGCATCCT
CTCGGTTGTTTGTTTCTGTCAACCGGTTTGAAGGCACGGCGAGAGTACCT
GGCAACACCTTTGACCACTTGATTTAGTACATATTCTTTGCATTCTCTTT
GTTGTATGAAGGCACGGCGAGAGTACATGGAACAACGAGAATCGTTTTAC
GGGGTGGAAGGACGTGCCTCTGTCGGACAAGGGTAAGGAGGAGGCCGCCC
AGTCCGGCGAGCTCATCGCCGAGTCGGGCTTGACGTTCGACGTCGCGTAC
ACGTCAGTGCTCAAGGTTCGTGCCACTTGATTTTATTGTTTTTGTTGCTG
TCGGCCGCTGCAATTATTTGTGGTGCTGCTGTTACAGTTAACTGCTCGGT
GCTCAAGGTTTGTGCTACTCGTTGTTGATATTGGTCGCGGGTGTTTGTGC
TGCTGCTGCTGTTGTTACTGTTAACCCCGGACCCCCAAGGGTTGTGCGAA
GAGTGAGAGCGACTTGTCCGCAGGATTTCTGTTCTTGTGGTAAGAAATTC
TGTTGGGCTGATCGCGGTCTTTTGTTCGGGAAGAAATACTCACGTGATTG
ATGATGGCTTCGGGTTGTGCCTTTTTTACCGAGGTTCATCAACCGCTTGC
TTTCATTTCTTGAGGTCTCTTGTCACGGTTGGTTGCCCAAGTTGTTTGAA
GCGTCCTCCCCGCTTTGCCCTACTTCCTCTGTGGGGCTTGTCTCCTCGCA
CCCTATTTTGGTTGCGCACAGCGAGCAATCAACACCCTGTGGTGTATCCT
CGAGAAGACCGACCTTATGTGGATCCCGGTGATCCGATCGTGGCGCCTCA
ACGAGAGACACTACGGTGCCCTCCAGGTGCGTTCGTTCTTCATCACACTG
TAGAAAGCTGGTGTGGTTTGTGGTTACAGCTGTTGTTGCCAATGCACAGG
CTCGTAAGGCCGTCCTGAGCTCGTTGTTGTCGTTGTGATTGTGGTTGTTG
TTGTTGTTGCTGCTGCTGCTTTAGTTGCTGCCGTTGTCTGCACATTGAAA
GCCGTCCTGACCTCGTGCGCTTCTCTGCTCCGAACCTCCACGTTCTGTGT
TGGCCAGGATTCCACACTAACCGAATAACTAGGATGTATGTTTTTCGCGA
ACAATGCAAGGAGCATCAAATGCGTGAGTCGAAGTAGAAATGACCCCCGT
CACGTTAGAGACCGAACCGCGCGACGTCGTAACAGCGAAGGCGTTCTGAC
CTTGCGCTCCTTGTTTCGTGTTTTTTTGGTATGCTCAAGGGTTTGGACAA
GAAGGAGACCGTTGCGAAGCACGGAAAGGACCAGGTCATGATCTGGCGCA
GGAGCTACACCACTCCGCCTCCTCTCCTCGCTGACGATAGGTACATATCC
TCCTCGTTTCATGTTCATGTTGCTGTTGTTGTTGGCGTTCGCTTCCTGTA
ACTTGGAGATATAGTTCGAACGTCCACGTAACACCCGCTACAATGAATTG
GTGATGGTAGAGCAAGACATTAAGCGAAACGAATTCCGTGGTCGCGTGCG
CGAAAAGTTAAGGTCAACGCGTGTCGTATGTGAACGCCAACATGGTATGT
CGCGTGCGATTGTCTTAATACTCTTCATGCTGACCTTGACCATAACAGGG
CGGCTGGGTGGCTCAGTCATAAGCTCCACCTTCTCGAGGCTATGACGTGT
TCGAACGTCGACGCAGGCACGCGAACCGGGACATTGTCTCACAATCTGTT
CCCACCTTGCTTTGAAACCATCAATGTGTTCAGGATTGTCGTTTCTCAAG
CGTTGGAACTCAGACCCCCATTGTTACCGTATCCGTTTAATCCCAATTCC
TTTTTCACAGCGATGACCTTCCTCAGTACGACCGCAAGTACGCTGGGGTG
GATCCGGCAGACCTCCCGCGGGCGGAATCTCTCAAGGTGCGTGATCAATT
TGTTGTTGTTGTGACTGTATTCGTCGAGGTGGAGAAATCCTGTCTACTGT
TCCTGGAGGAGCATCTAGTTTCAATGTCGACGGAGTGGTTGAGTCGCGCC
AACTGCGGCTGTCTCCTGTCATCTAGTTGGCCTTCGCTTGGAGGAACGCG
TGCAGCTCGTCAAACCCATGCGGGTATCAGGGTCAGCAAGACGTTTGCTC
CTCATCACCATCGTGTACCGTTGCTGTGCTTGACCGCCTTGGTTTTGTGC
GCGTTGCTCGTTGGCTGCAGTTGACGAAGGACCGTTTCCTGGTGGAGTGG
GAGAACGAGATCGCCCCTGCCATCAAGAGCGGGAAGCGGATTCTTATCGT
GGCCCACGGCAACACCATCCGCGGGCTGTGCCAGCACCTGGATGAGATAT
CCGACGAGGACATCGTCGGCTTGGACATCCCCACCGGTGAGCTGGCAAGG
TCTTTCTGTCAGGTCTTTCTGTGTGTGTCTCTCGCTTTCTCGTCTGTCTC
TCTGTTATTTCTCTGTCGCGTGAGGCTGAGTGCGCCTCTCGTTCTACATA
TTAAAGTCGTTCGGAGCGTGGTGGTTTGGAGTCATTCGGGTACACTTGCT
GCAAGCCAATGCAAAAGCCGTTCGCTCCATGCTGAAGATGATGTGCCATC
GCTGGTTGTACCACAGCAGTCTCACCATCCAGTCGAGTACGAGACCAGAG
CTTTCGCTCCTCTGCCCCCCCGCCTCCAGCGAATCAATGGTCAATCGCAG
TTGGGGTCAGATCTATACAAGCAACGGAGAACACCCCCCGCATAGTTCCT
TTCCCTCCTCATTTCACTTTCGCGCACTGGTAGCGAAACCACATTTTTCG
AATGGTCGACCTCAACTCTGATGAGAAAGACGGCCGGTCGGTTCGCACAA
ATCTGATAGCACCCGCTCCCTTGGATGGGACATGGTTGCCACAATACCGC
ACAAAGGAAAGGTTAATGTATGTACATCAAAGAATAACTCATGTGATGGG
CGTGGTGGGCACGTCTCGAGTGCGTGGGATGTTGGCTGTTCATCTATTTG
ATGAAGTACGACCTGTGCTTCGTCTCTCGAAAGGGATAATGGCCCGGAGC
CAATATTTATAGCATCTACTCGAGTGACTGACTGCCCGCTGTTTCTCCGC
TTTCCCTCCCTACCTTTTGGTCTGTTGCAGGTGTGCCGCTCGTGTTCACG
CTGGACAAGGACCTCAAGCCCATCACACACCCGGAAGCTATCCCCCCGCT
GTCCGCCCGCTACCTCGGGGATGTTTCGGGAATCCGCGAAAGGATCGAGG
CGGTCAAGGCGCAGACCAAGTAACAGCAGTTCGAGTACCGAGTACATCAT
TCAAGACCAGAATTTTTAACAGTGGCGTTTCGATGTTTTTGCGTTCTTGA
GCTTGCAGGATATGGCGGTTGGACATGAAAGGACATGTTTTATAGTTGAC
TACTACTGTTCAGAGGCAGACGCGGAAATTCGGGCGGGGTACTGGAGAGG
GGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGTTGATGCAGATTGCGGCA
CCATGTAATGTAGTACATGTAGTGCAGTACTTTGTCTCCTTCCAACCGAT
GGGTGTCAAAAGCATCAGTCTTCATGTATATTATCTCTGAATTATTTTTT
ATTGTTTGTCGTCTTAGCCCGTTTGGTTGTCTTGTGTGTTGTGGTTTTGT
GGCTTCCTTTTTTGTTGTCTTAGACCCGTCGACCGGACGGTGGGTTTCCT
CCGAGGCTGCTACACACATTCACCGCACGCTGCACCATACTAGATGAAGC
TATAGCAGCGCGATGCGATTCATACAGTCATGGAGATTTTTTTCCACAAC
AATTGCGTGGCTTATTTCGACGGCTTGCCTGTCCTTAAGGCGCCAGCACA
GATTGGCGATGGATGGTGGGGTGGTCACCAAGGAAGAAGTCTTGGCTACC
TTTGTAGACTACACCAGACCAGTGTTCAACACACCGCGGGGGGAGTTGCC
ACACGCATGCCCCCGGCGGAGTGATGCTTCATTTTGCACGCTTTTCTCGA
CACCAAATCACTGATCTTTCTGGGGGGGGCGTTTAGTGTGAAGCCTCCTC
GACGCCAAACGCTCTAGGAATATTGATAAAAATTCGGCGAAGTACTCCGT
AGATCACGCTAAAAGTACAAATGATTTGGTTCTGTCAGCACATCATGTTT
GTTTTACGTGGGATGCGGACTACAAACGTCAAGAACTTCACGTCGCTTCG
AA back to topCoding sequence (CDS) from alignment at Scaffold_419:41864..47615- >EsuBft1108_3a-0001 ID=EsuBft1108_3a-0001|Name=EsuBft1108_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=945bp|location=Sequence derived from alignment at Scaffold_419:41864..47615- (Ectocarpus subulatus male Bft15b) ATGACAATTGCAGGGTTCTTAGCTCCCTCCGTGGTGGCTAGAGGGCGCGT GCAGTCGGCGGCGGCGGCGGCGGCGGCAGTCCGCCTGGGCGACAATGCGG CGACATTGCGCTCGGTTCGGGGGGCAAGGAGCGGCATGTCGATGGCCTCG CCCGAGACCACGCCAGAGGGGGATGACACCTACACCCTCGTAGTAGTTAG GCACGGCGAGAGTACATGGAACAACGAGAATCGTTTTACGGGGTGGAAGG ACGTGCCTCTGTCGGACAAGGGTAAGGAGGAGGCCGCCCAGTCCGGCGAG CTCATCGCCGAGTCGGGCTTGACGTTCGACGTCGCGTACACGTCAGTGCT CAAGCGAGCAATCAACACCCTGTGGTGTATCCTCGAGAAGACCGACCTTA TGTGGATCCCGGTGATCCGATCGTGGCGCCTCAACGAGAGACACTACGGT GCCCTCCAGGGTTTGGACAAGAAGGAGACCGTTGCGAAGCACGGAAAGGA CCAGGTCATGATCTGGCGCAGGAGCTACACCACTCCGCCTCCTCTCCTCG CTGACGATAGCGATGACCTTCCTCAGTACGACCGCAAGTACGCTGGGGTG GATCCGGCAGACCTCCCGCGGGCGGAATCTCTCAAGTTGACGAAGGACCG TTTCCTGGTGGAGTGGGAGAACGAGATCGCCCCTGCCATCAAGAGCGGGA AGCGGATTCTTATCGTGGCCCACGGCAACACCATCCGCGGGCTGTGCCAG CACCTGGATGAGATATCCGACGAGGACATCGTCGGCTTGGACATCCCCAC CGGTGTGCCGCTCGTGTTCACGCTGGACAAGGACCTCAAGCCCATCACAC ACCCGGAAGCTATCCCCCCGCTGTCCGCCCGCTACCTCGGGGATGTTTCG GGAATCCGCGAAAGGATCGAGGCGGTCAAGGCGCAGACCAAGTAA back to top
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