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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7FYR4 |
| ProteomeId | EsuBft114_24 |
| Protein domains | IPR002110 |
| Protein domains | Coil |
| Protein domains | IPR020683 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 278 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.62e-24 |
| EggNOG OGs | 2C0FJ@1|root,2S48R@2759|Eukaryota |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-26_005070.2 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | ankyrin repeats |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0031227 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft114_24a-0001 ID=EsuBft114_24a-0001|Name=EsuBft114_24a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2784bp|location=Sequence derived from alignment at Scaffold_129:918068..922904- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CACACAACTCACGGCTCTCTCACTCACACCCACCAGAGCACACTTCCAAC AACTCTGGCCCTCTGACTGAGCAGCAGACGCACCGGCCTTTGTCTATCAC ACAGTTTCCATTTCCCTTTTTCACCTTCGTACCGCCGTACTTCGCACATC AAGAGAGCAAGCACACGTCAACACCATGGCTGCCCCACCTCCGCCCACGA CAACAACGGTTGCTGCGCCAGCGAACGCCGGCTCCGCCCTGGCTCGCCGC GCGCTGAGAGAGCGGCGAGCCCAGCGTCAGGCGCAGGCCTCGCAGTTGAT GCTCTCCTCGAGGCGCTGGGTGGCCGCCGCGGTGGCCTCGTCCGGGTGCC CTTCCTTGCAGCACGTGCACCTCGAGGAAATGCGACGCAACCTCATCGCG CGTCGACGCGGGTACCAGATCCAGCAGCAGCAGCAGCAGCAGCGGCAGCG GCAGCGGCAGCAGCGGCAGCAACAGCAACAGCAACAGCATCACCACCACA TCAACGCCCCTTCTTCTCCTGGCCTATCCGCCGCCGTGAGCGCCGCCGCC GCAGCACCGGCAGCAGCAGCAGCAGCAGCTGTACCGCCTGACGCACACCT CATCGCGTTGCTGAAGAAGAGGGGCCGCACACCCAAGGCGATCGTCAGCT CGGCGGAGGCAGGGTACAGCGTACCGCCAACCGCCAAGCAGATCATGGAC TACGACGCGCAGCCGCACCTGAGCGGGCTCGCCAGGACGGGCGACATGGA AGGGCTGCAGAGGGCCGTGAACGCAGGCAGACGCATGGATGCTTGCAACA AGTTCGGCGAGTCCGTCGTGCACGTCGCCTGCCGCCGCGGCAACCTGCCC CTCCTCCTGTTCTTGGTGGCCAACGGCGGCTCCCTCACGGCCTGCGACGA CCTGGGCCGCTTCCCGCTGCACGAGGTCTGCTGGGCGGCGCAGCCCCGCT TCGACATCGTCCGCGTGTTTCTGGAACACGAGCGGGAGACCAACAACCGG CGTCGCCAGAGCAGCAGCAGCAGCTGCAGTAGCAGCGATGCGACCACAGT CAGCGGTGCAAGCACCACCACCAGCGATGGCGAGAGCACCCGCTCCGGAA GCGACAGCATGGCTGACGACGGCGACAACAGCAAAAACAACAACGACAAC ATCGTCGTCGACCTGAACATGCTCCTGGTGACCGACAAGCGAGGCTGCAG CCCGCTGCGCTATGTGAAGGAGGAGTCATGGCCGGCTTGGCGGCAGTTCC TGGACGAGGTGGTTGACGAGTTCTGGCCGTCCCTCGTTTGAGCACGCACG CACTCACGCAGCAAACGAAATAGCTGTACAGCTGCTGTATTTTGTTATAC CATGTCGTCTAGGGAACATCGATATACATAAGGAAAAGTTAAGCCACCGT ATCGAGGAAACGGGGCTACATCACTTGCGGGATTGGTGCTACGGGGCACG GTGTTCCCGGGGAAGGAAATTAGCGGGGTGGGGGGGGGTTCGGAGGCCGA ACCGTCGCCGTTACGAGAAAACACGTGACAACAACCTTCCAGGTGCTTGG CGGGAACAATTTCCGGGTGCTGGGAGGTTGGTGCGCGGTAGGACTCCTAG AGGCAAGGGTAGAGGGGGCTCGAGGGGGGGGGGCTGAGAAAGCGGCCGTG GTGTGAAACGGACCAAGAAATACTTTTCTGTTTTTTTTTTTGTGTCTACC TTTGTCTGCTTGACCTTCTTCTCTGTATTAAGCGTCGTGTTACTTGCTCC CCATTGTGTTGGCGAGGCCGTCTTTCTTTTTTTTGTGTGAAGCCGAGCCT GTTATAGCGGATTGTCTTGGTGTCTCCTACTGTTCTGTGAGTGCAATGCC TGTTCTGTCGGCTGCATCACGCGCTACTTTGTTGCGTCGCTTGCTTTCTG TAGGTTGTTTTTTGTTGCTGTGAGCACAACTGTGATTGTGGGTAGAAGCT GGTCTCGGTTGTGTGTGGTTATGTTTGTTGCCCTCGCGTAGTCAGCAGTT GGACCATATATCGTTTAGTCCGCGTTCTGGGACACCGAAGAAGGTACCAC GCTGCTACTGCGCATGTTTGAAGAGTGTGATGGTCTCACGCTTTGATTCA CGTTCTTCTACATTATGGTGTTAAATAAAATTGTGGTGGTGACGTGTACT CGCGGGGACCCGTGGCAAACGTTCCCTGGACTGTACCTTTCGTTAGTTCG TTTTCTTGGCGCGGGAAGCCGTAGGGGCGTTACCCGGGATTGTACCTTGT TCGTTGTTGTTGTTTTCCTTAGATCGTGTTTCTCTGTAGCTGGCTGGGCG CTTTGCGCACCCAGTCGCCGTCGGAGTCAAGACTGGTTTGCTGCGATTTT CACGGAAAGAGCTACTACTCCACAAAAGGAGCGTGTCGTTGTCGTCGTCG TCGTGTACTTTTTTTTTTCTTGATGACGCGACGTGCTATTTTTCCGCGCA CAGGAGACGCATGTTGATCGGGGTGTGTCGTGTTCGACCCTTGTATTCTG GAGCCAGGTCTCCATATACCTTTCGGCATGTATCTGACATACGTATTTAT CAGCTCGGGTCACATACACCCGGGAAGAAGGTAGCAAGTCCAGTAGGGAT TTATTTGTTTTTTTCCTTTTCAGTAGGAGCTGTGTAGAAGGAGCGGTGGT GCAGCATGCAGACACCGACGAATTGAAGGGATATGAAGAGTTAAGAAACC AAACGGAATCGTCAAGTCACAAGCACGAATACATGCGGAGCACGCCAGTA CCATTCTTTTTATTCGGCTGCTGCTGCTGCTGCT back to topprotein sequence of EsuBft114_24a-0001 >EsuBft114_24 ID=EsuBft114_24|Name=EsuBft114_24a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=371bp
MAAPPPPTTTTVAAPANAGSALARRALRERRAQRQAQASQLMLSSRRWVA AAVASSGCPSLQHVHLEEMRRNLIARRRGYQIQQQQQQQRQRQRQQRQQQ QQQQHHHHINAPSSPGLSAAVSAAAAAPAAAAAAAVPPDAHLIALLKKRG RTPKAIVSSAEAGYSVPPTAKQIMDYDAQPHLSGLARTGDMEGLQRAVNA GRRMDACNKFGESVVHVACRRGNLPLLLFLVANGGSLTACDDLGRFPLHE VCWAAQPRFDIVRVFLEHERETNNRRRQSSSSSCSSSDATTVSGASTTTS DGESTRSGSDSMADDGDNSKNNNDNIVVDLNMLLVTDKRGCSPLRYVKEE SWPAWRQFLDEVVDEFWPSLV back to topmRNA from alignment at Scaffold_129:918068..922904- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft114_24a-0001 ID=EsuBft114_24a-0001|Name=EsuBft114_24a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4837bp|location=Sequence derived from alignment at Scaffold_129:918068..922904- (Ectocarpus subulatus male Bft15b) CACACAACTCACGGCTCTCTCACTCACACCCACCAGAGCACACTTCCAAC
AACTCTGGCCCTCTGACTGAGCAGCAGACGCACCGGCCTTTGTCTATCAC
ACAGTTTCCATTTCCCTTTTTCACCTTCGTACCGCCGTACTTCGCACATC
AAGAGAGCAAGCACACGTCAACACCATGGCTGCCCCACCTCCGCCCACGA
CAACAACGGTTGCTGCGCCAGCGAACGCCGGCTCCGCCCTGGCTCGCCGC
GCGCTGAGAGAGCGGCGAGCCCAGCGTCAGGCGCAGGCCTCGCAGTTGAT
GCTCTCCTCGAGGCGCTGGGTGGCCGCCGCGGTGGCCTCGTCCGGGTGCC
CTTCCTTGCAGCACGTGCACCTCGAGGAAATGCGACGCAACCTCATCGCG
CGTCGACGCGGGTACCAGATCCAGCAGCAGCAGCAGCAGCAGCGGCAGCG
GCAGCGGCAGCAGCGGCAGCAACAGCAACAGCAACAGCATCACCACCACA
TCAACGCCCCTTCTTCTCCTGGCCTATCCGCCGCCGTGAGCGCCGCCGCC
GCAGCACCGGCAGCAGCAGCAGCAGCAGCTGTACCGCCTGACGCACACCT
CATCGCGTTGCTGAAGAAGAGGGGCCGCACACCCAAGGCGATCGTCAGCT
CGGCGGAGGCAGGGTACAGCGTACCGCCAACCGCCAAGCAGATCATGGAC
TACGACGCGCAGCCGCACCTGAGCGGGCTCGCCAGGACGGGCGACATGGA
AGGGCTGCAGAGGGCCGTGAACGCAGGCAGACGCATGGTGAGTTGGTGTC
ACACACTACGCACAGCAGGACGACGTTGTCGTCGTCGTCGTCGCTGCCGC
GGATTTCGCTTTTTTATTTAGTTAATGGATTTTTTTGGGAACGGAACTCG
TTCTTCTCGACGATCGATGGCGGTGACTGGTTCTGCTGGCTGCTGACGAC
AGCGCGCGGTACATGTTAGTGCAAACGCACCGCCGCCACCGTTGCCGCAA
GTGTGTGTGTGCCCCCGCCGCAACTATCCTTCTACAACGCATTTTTGCTA
CGGCCGAGAGGAGTTGACGTTCGTTATCTGTTTCGACCGCGCCAAAACAT
TTACTGGTATTGTACATCTGTGCAGGATCTCACACGTGGAGGTTTGAAGT
TAGATGGGATCTGAGATCCATTCGGAAAAACCCGCGAACGAACGCTCAAG
GGACCAATAACACGTACGGTCAGGAGCAAACTCTAGAGTCTGTAAGCTCG
TGGGAATAGCGCGCGTGTCAACATGTTGCAGCCCCTCGTGCGTGCGTGCG
CTCGTTGTTTGGTTTGTTGTCGCTCCTATGGTCTATGCACCGCTACCTGA
AACTGGAGAAACACGACCAAGACCAACTGACACCATCGGTTGTCCGGTAG
ATTTTCCGGCGACGGTATGTACAATATGCCCATGTTGCTAGATCATCCAT
CAAACCAATGACCTCTTCCCACAACCACTCACCCTGCCTGTGGCCCAACC
TCCGAATTAACTCCACGGTTCGATCTACTTGTGCAACCCTCTGTTCTATC
TGGCGATGCTCATCTTTTTTGGAAGCAGCGGGACTTAAATGTGAACGGCA
AGCTGGTTGGGGTTTCATGCGAAACGTGACCTTACCTCTGCGTCGTCGTC
TTTTTTTTTCTTGTCCACGTCAAGCCGCCATGCTGATGTGTTTGCAGAAA
CTGATGTGTTTTTCCTACACACCATCGCGGATATGTATCCTGAATAGTCC
AGCATAGTATTTCTCTTTCTTACATATCGAAAGGATGTACCCTGCGTGTG
TATCTGTAGGTAGCTAGCCTGTGGTGACCGCGTCCCTGCGGGACCAGCGG
TACACGTGGTGGAAGGTGACCGGGCAGAGAGCATAGCTCTTGTTTCCTGT
CTGCAACTACCGCTCCTGTTGTTTCCTTTTTGCATCGTGTGGCGGCTGAT
AGCGCGCGCTTTCTTTCCCGACGAAAACTCATGTACGACTGGCGCCCGCG
CGAACACATCGATCCTGTGCAAGAAGCCTCTGAATCTGAAACAAGCGAAT
ACAGCAGTAGCAGCACCCCTTGTTTCAGGTTGGCCTGTATACACGACGTC
ACCACCACCTTTACTGAGAATTCGATTGCCACAGGAAATAAATAAAAGAT
CGTGAACCGCACGCACCACCAGTAGTCATGAACCCTAAGCATTTTGTTGT
GTACGCCACCGGCCAAATAAGGAAGGGGGTATACTTTGGGCTCTAAGTGT
TCTTAGGCGGGGCTGCGGCCCTATCAGTTGCTTGGCTCCCAACGAGGCAC
GTCGGGGCCACTCCTTTCCGCTTCCACAAACGCCCACGGAGTACCTCCGT
ATCGATTCAACTGACGCGGACTTATTACGCAAATCAAGCAATCGAAAGCA
TCCTCAAACCCTCGGCAATGTACATATAGTATGCAACAACAGAGCAGTCG
TGTACAGAACTTGCATGGTGGCCTGCCCATTTTTCTACCCGCCTTTCCCC
GTTGCGAATCAGTTATTCAATATGGCAATACGTTAACAATTTTTTGACCC
GCCTCGTTTTTTATTTTTTCCAATTCAATGATACGCCCAGGATACTTTGG
AGCAACAAACCATCCCGCTGCTGTCGCTCAATAACTTACTTATCCCTCCT
CCTCCTTATTTAAAAAAAAACAGGATGCTTGCAACAAGTATGGCAAAACG
TTAACAATTTTTTGACCCGCCTCGTTTTTTATTTGTTCCAATTCAATGAT
ACGCCCTGGATACTTTGGAGCAACAAACCATCCCGCTGCTGTCGCTCAAT
AACTTGCTTATCCCTCCTCCTCCTTATTTAAAAAAAACAGGATGCTTGCA
ACAAGTTCGGCGAGTCCGTCGTGCACGTCGCCTGCCGCCGCGGCAACCTG
CCCCTCCTCCTGTTCTTGGTGGCCAACGGCGGCTCCCTCACGGCCTGCGA
CGACCTGGGCCGCTTCCCGCTGCACGAGGTCTGCTGGGCGGCGCAGCCCC
GCTTCGACATCGTCCGCGTGTTTCTGGAACACGAGCGGGAGACCAACAAC
CGGCGTCGCCAGAGCAGCAGCAGCAGCTGCAGTAGCAGCGATGCGACCAC
AGTCAGCGGTGCAAGCACCACCACCAGCGATGGCGAGAGCACCCGCTCCG
GAAGCGACAGCATGGCTGACGACGGCGACAACAGCAAAAACAACAACGAC
AACATCGTCGTCGACCTGAACATGCTCCTGGTGACCGACAAGCGAGGCTG
CAGCCCGCTGCGCTATGTGAAGGAGGAGTCATGGCCGGCTTGGCGGCAGT
TCCTGGACGAGGTGGTTGACGAGTTCTGGCCGTCCCTCGTTTGAGCACGC
ACGCACTCACGCAGCAAACGAAATAGCTGTACAGCTGCTGTATTTTGTTA
TACCATGTCGTCTAGGGAACATCGATATACATAAGGAAAAGTTAAGCCAC
CGTATCGAGGAAACGGGGCTACATCACTTGCGGGATTGGTGCTACGGGGC
ACGGTGTTCCCGGGGAAGGAAATTAGCGGGGTGGGGGGGGGTTCGGAGGC
CGAACCGTCGCCGTTACGAGAAAACACGTGACAACAACCTTCCAGGTGCT
TGGCGGGAACAATTTCCGGGTGCTGGGAGGTTGGTGCGCGGTAGGACTCC
TAGAGGCAAGGGTAGAGGGGGCTCGAGGGGGGGGGGCTGAGAAAGCGGCC
GTGGTGTGAAACGGACCAAGAAATACTTTTCTGTTTTTTTTTTTGTGTCT
ACCTTTGTCTGCTTGACCTTCTTCTCTGTATTAAGCGTCGTGTTACTTGC
TCCCCATTGTGTTGGCGAGGCCGTCTTTCTTTTTTTTGTGTGAAGCCGAG
CCTGTTATAGCGGATTGTCTTGGTGTCTCCTACTGTTCTGTGAGTGCAAT
GCCTGTTCTGTCGGCTGCATCACGCGCTACTTTGTTGCGTCGCTTGCTTT
CTGTAGGTTGTTTTTTGTTGCTGTGAGCACAACTGTGATTGTGGGTAGAA
GCTGGTCTCGGTTGTGTGTGGTTATGTTTGTTGCCCTCGCGTAGTCAGCA
GTTGGACCATATATCGTTTAGTCCGCGTTCTGGGACACCGAAGAAGGTAC
CACGCTGCTACTGCGCATGTTTGAAGAGTGTGATGGTCTCACGCTTTGAT
TCACGTTCTTCTACATTATGGTGTTAAATAAAATTGTGGTGGTGACGTGT
ACTCGCGGGGACCCGTGGCAAACGTTCCCTGGACTGTACCTTTCGTTAGT
TCGTTTTCTTGGCGCGGGAAGCCGTAGGGGCGTTACCCGGGATTGTACCT
TGTTCGTTGTTGTTGTTTTCCTTAGATCGTGTTTCTCTGTAGCTGGCTGG
GCGCTTTGCGCACCCAGTCGCCGTCGGAGTCAAGACTGGTTTGCTGCGAT
TTTCACGGAAAGAGCTACTACTCCACAAAAGGAGCGTGTCGTTGTCGTCG
TCGTCGTGTACTTTTTTTTTTCTTGATGACGCGACGTGCTATTTTTCCGC
GCACAGGAGACGCATGTTGATCGGGGTGTGTCGTGTTCGACCCTTGTATT
CTGGAGCCAGGTCTCCATATACCTTTCGGCATGTATCTGACATACGTATT
TATCAGCTCGGGTCACATACACCCGGGAAGAAGGTAGCAAGTCCAGTAGG
GATTTATTTGTTTTTTTCCTTTTCAGTAGGAGCTGTGTAGAAGGAGCGGT
GGTGCAGCATGCAGACACCGACGAATTGAAGGGATATGAAGAGTTAAGAA
ACCAAACGGAATCGTCAAGTCACAAGCACGAATACATGCGGAGCACGCCA
GTACCATTCTTTTTATTCGGCTGCTGCTGCTGCTGCT back to topCoding sequence (CDS) from alignment at Scaffold_129:918068..922904- >EsuBft114_24a-0001 ID=EsuBft114_24a-0001|Name=EsuBft114_24a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1116bp|location=Sequence derived from alignment at Scaffold_129:918068..922904- (Ectocarpus subulatus male Bft15b) ATGGCTGCCCCACCTCCGCCCACGACAACAACGGTTGCTGCGCCAGCGAA CGCCGGCTCCGCCCTGGCTCGCCGCGCGCTGAGAGAGCGGCGAGCCCAGC GTCAGGCGCAGGCCTCGCAGTTGATGCTCTCCTCGAGGCGCTGGGTGGCC GCCGCGGTGGCCTCGTCCGGGTGCCCTTCCTTGCAGCACGTGCACCTCGA GGAAATGCGACGCAACCTCATCGCGCGTCGACGCGGGTACCAGATCCAGC AGCAGCAGCAGCAGCAGCGGCAGCGGCAGCGGCAGCAGCGGCAGCAACAG CAACAGCAACAGCATCACCACCACATCAACGCCCCTTCTTCTCCTGGCCT ATCCGCCGCCGTGAGCGCCGCCGCCGCAGCACCGGCAGCAGCAGCAGCAG CAGCTGTACCGCCTGACGCACACCTCATCGCGTTGCTGAAGAAGAGGGGC CGCACACCCAAGGCGATCGTCAGCTCGGCGGAGGCAGGGTACAGCGTACC GCCAACCGCCAAGCAGATCATGGACTACGACGCGCAGCCGCACCTGAGCG GGCTCGCCAGGACGGGCGACATGGAAGGGCTGCAGAGGGCCGTGAACGCA GGCAGACGCATGGATGCTTGCAACAAGTTCGGCGAGTCCGTCGTGCACGT CGCCTGCCGCCGCGGCAACCTGCCCCTCCTCCTGTTCTTGGTGGCCAACG GCGGCTCCCTCACGGCCTGCGACGACCTGGGCCGCTTCCCGCTGCACGAG GTCTGCTGGGCGGCGCAGCCCCGCTTCGACATCGTCCGCGTGTTTCTGGA ACACGAGCGGGAGACCAACAACCGGCGTCGCCAGAGCAGCAGCAGCAGCT GCAGTAGCAGCGATGCGACCACAGTCAGCGGTGCAAGCACCACCACCAGC GATGGCGAGAGCACCCGCTCCGGAAGCGACAGCATGGCTGACGACGGCGA CAACAGCAAAAACAACAACGACAACATCGTCGTCGACCTGAACATGCTCC TGGTGACCGACAAGCGAGGCTGCAGCCCGCTGCGCTATGTGAAGGAGGAG TCATGGCCGGCTTGGCGGCAGTTCCTGGACGAGGTGGTTGACGAGTTCTG GCCGTCCCTCGTTTGA back to top
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