EsuBft95_16a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft95_16a-0001
Unique NameEsuBft95_16a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_129contigScaffold_129:332943..335511 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FGP5
ProteomeIdEsuBft95_16
Protein domainsIPR002110
Protein domainsPTHR24123
Protein domainsIPR020683
Ownerapollo_admin@sb-roscoff.fr
Noteankyrin-3 os:homo sapiens gn:ank3 pe:1 sv:3 [Automatic annotation]
Nb exon7
Max annot lvl2759|Eukaryota
Length2130
Hectar predicted targeting categoryother localisation
Evalue1.28e-49
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
Descriptionspectrin binding
COG categoryI
Cross References
External references for this mRNA
DatabaseAccession
GO0086065
GO0031227
GO0032414
GO0072659
GO0050896
GO0051924
GO0043231
GO0098589
GO0055117
GO0007399
GO0016020
GO0048468
GO0048513
GO0043232
GO1902582
GO0044304
GO0086001
GO0044459
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft95_16aEsuBft95_16aEctocarpus subulatus male Bft15bgeneScaffold_129 332943..335511 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft95_16a-0001EsuBft95_16Ectocarpus subulatus male Bft15bpolypeptideScaffold_129 332943..335511 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft95_16a-0001-exonagat-exon-30752Ectocarpus subulatus male Bft15bexonScaffold_129 332943..333118 -
EsuBft95_16a-0001-exonagat-exon-30751Ectocarpus subulatus male Bft15bexonScaffold_129 333179..333532 -
EsuBft95_16a-0001-exonEsuBft95_16a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_129 333574..333735 -
EsuBft95_16a-0001-exonagat-exon-30750Ectocarpus subulatus male Bft15bexonScaffold_129 333930..334360 -
EsuBft95_16a-0001-exonagat-exon-30753Ectocarpus subulatus male Bft15bexonScaffold_129 334404..334594 -
EsuBft95_16a-0001-exonagat-exon-30755Ectocarpus subulatus male Bft15bexonScaffold_129 334655..335219 -
EsuBft95_16a-0001-exonagat-exon-30754Ectocarpus subulatus male Bft15bexonScaffold_129 335261..335511 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft95_16a-0001-cdsEsuBft95_16a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_129 332943..333118 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft95_16a-0001 ID=EsuBft95_16a-0001|Name=EsuBft95_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2130bp|location=Sequence derived from alignment at Scaffold_129:332943..335511- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTGATGACGGAAAGAGCACTACTTCCACACAGAGTATTCGGACCAT
CTTGCAAGGGTCCGACGGCGCTATATTCGACCTCCTCTGTGCCGGGGCCT
CGAATCAGCAGTGGACAGAGTGGCTTCGGACTCCGGTGGAATATGCTGTG
GCTGCTGGCAATTTGGACCTCGTTGTCAAGCTTGCCCAAGCGGGGCAAGC
GGGGGCAAGAAACAGTGCTATGCCCTCGGCTGTGAGAAGAGGCCACGATG
CCGAGCCAGACGAGCGTGGCAACACTCCTCTTCATATCGCTGCCAGCCTT
GGCCATGACGCCATCAATGCGCTACTGCTACTTCAGAAGGCTGCCGTTAA
TTCGCTTGATGGCGAGGACCGCACGCCTCTTCATCTAGCAGCTGGGAAAG
ACTCTCTTGCTGGTGTCAAAGCTCTGGTCTCTGCCCACGCGGATCTTCGC
CTCCGCTTCGGTGACGCTGATGAATCACCGATGGACTGTGCTGCGTGCTT
CGGTTATGTGGACATGATGCTCACGCTGACCCAACACGGGGTTGGCGTAA
ATGATGCTGCCGCTACCGGCATGACTCCCTTGCACATCGCTGCCGGTCAA
GCCCAACTTCCTGCGATCGATGCACTTGTGGAGGCTGAGGCCAACGTCGG
GGCGGAGGAATATGGAACCGGTGGTACGCCGCTACATTTGGCGACAGGGT
CTGCCTCGGTCGATGCTGTGGCTTGTTTATTGAGGCACGGGGCAGACGCA
AACAAGCTTAACGGTGATCGACTCTCCGCTCTCCACCTGGCTGCCAAGGA
TGGCGCAGCTGACATGACAAGCCTTACCGCTCTGCATATGGCTATCTCCA
ACAAGGACACGGGCGTAATCGATGCCCTTGTAGAAGCCGGTGCTGAGGTT
GACGCTCAGGGAGGTGAAACGTGTGAGACACCGTTGCATCTGGCAACCAA
GCTGGGATCATCCGACGCAGTGGCCATTCTCTTGACGCACGATGCTGACC
CGAAATCCACTGCCATAATTCAGGCACTTGTGGCTGAGGGTGCTCAGCCG
AGCCTTTCTGAAGGCATCAATGGAATGACTTCTTTGGCCCTAGCCGCTGC
ACGGAGACATGGTGAGGCCGCAGCATCGTTAGTCCTGCATCGACCGAGCG
CGAATGCTCAGGACGATCGTCGCCGGACTGCCCTGCACTGTGCTGCCTCC
AACGACAATGTGGCGGTCATCGATGTGCTTGCCGCCGCCGGGGCTAAAAT
AGGCGCGAAGGACAAAAGGGGTTGGACGCCTCTGCATTTCGCATCGTCTG
GTGGGTGCATTGAAGCTGTTGCGGCGCTCATGAAGCACGGGAGTGACGGC
AACATCGTAAATTTCGACTGTTACTCGCCGCTCCACCTTGCAGTATGTAA
AGGAGATTGCGCTGCTGTAACTGCCGTGTTGGTAGGCGGGGCCGACCTCG
AGGCGGAGGCAGCCCACGGGGGTACACCTGTTCATAATGCCCTGCAATGG
GGGTGTTCTGAAGTCGTCCTGGCCCTGCTGAAGCATGGCGCCCACCCGAC
CAAGCGGATGGCCAACGGCCGTGGCGGACGTCACGCGGCTGTCGGAGAAA
ACATCGATCTTCGTGACTATGAGGGTTCCACAGCGTTGCACCTGGTCGGT
GGCGATTCTGCCGAGGTCGTGGAAATCCTACTCCAACACGGCGCGGAAGT
GGAGTCTCGTGATATGGATGATCGAACTCCACTGCACAAGGTCGCCATGA
CCTACAATAAAAGGTACACCTCGATCGACGCCCTTGTTGACGGAGGTGCT
GCGATTGAGACCCCAGACAACTTTGGAAGAACCATCCTCCATCTCGCTTC
TTCGAAACACAGGTGTGCAGCAATGAAGGCTCTTCTTCGGAAGGGTGTTG
ACGTACTTGCCAAAGATAACGACGGACGCTCACCATTGCACCTTGCCGTG
TCATACGAAACTTCCAAAGACACCGTCGAATACGAGGACGTCGAGGACGA
GCCATACGTGGGCCGCACCCCGGTAGATGTTTGGAGGGCTCTCGCTGAGA
TGAATTACGCTTGGGCTAGTTCGGCGGCTCCCATTCGCAGGCTCTTGGTG
GGCGCTCAGAAGGACAGAACATGGCGTTGA
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protein sequence of EsuBft95_16a-0001

>EsuBft95_16 ID=EsuBft95_16|Name=EsuBft95_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=709bp
MTDDGKSTTSTQSIRTILQGSDGAIFDLLCAGASNQQWTEWLRTPVEYAV
AAGNLDLVVKLAQAGQAGARNSAMPSAVRRGHDAEPDERGNTPLHIAASL
GHDAINALLLLQKAAVNSLDGEDRTPLHLAAGKDSLAGVKALVSAHADLR
LRFGDADESPMDCAACFGYVDMMLTLTQHGVGVNDAAATGMTPLHIAAGQ
AQLPAIDALVEAEANVGAEEYGTGGTPLHLATGSASVDAVACLLRHGADA
NKLNGDRLSALHLAAKDGAADMTSLTALHMAISNKDTGVIDALVEAGAEV
DAQGGETCETPLHLATKLGSSDAVAILLTHDADPKSTAIIQALVAEGAQP
SLSEGINGMTSLALAAARRHGEAAASLVLHRPSANAQDDRRRTALHCAAS
NDNVAVIDVLAAAGAKIGAKDKRGWTPLHFASSGGCIEAVAALMKHGSDG
NIVNFDCYSPLHLAVCKGDCAAVTAVLVGGADLEAEAAHGGTPVHNALQW
GCSEVVLALLKHGAHPTKRMANGRGGRHAAVGENIDLRDYEGSTALHLVG
GDSAEVVEILLQHGAEVESRDMDDRTPLHKVAMTYNKRYTSIDALVDGGA
AIETPDNFGRTILHLASSKHRCAAMKALLRKGVDVLAKDNDGRSPLHLAV
SYETSKDTVEYEDVEDEPYVGRTPVDVWRALAEMNYAWASSAAPIRRLLV
GAQKDRTWR
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mRNA from alignment at Scaffold_129:332943..335511-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft95_16a-0001 ID=EsuBft95_16a-0001|Name=EsuBft95_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2569bp|location=Sequence derived from alignment at Scaffold_129:332943..335511- (Ectocarpus subulatus male Bft15b)
ATGACTGATGACGGAAAGAGCACTACTTCCACACAGAGTATTCGGACCAT
CTTGCAAGGGTCCGACGGCGCTATATTCGACCTCCTCTGTGCCGGGGCCT
CGAATCAGCAGTGGACAGAGTGGCTTCGGACTCCGGTGGAATATGCTGTG
GCTGCTGGCAATTTGGACCTCGTTGTCAAGCTTGCCCAAGCGGGGCAAGC
GGGGGCAAGAAACAGTGCTATGCCCTCGGCTGTGAGAAGAGGCCACGATG
CGTTCGTTGCGGAGCTATACTCCGGCTGGGAGCATTGCCAAGCGAGCCAG
ACGAGCGTGGCAACACTCCTCTTCATATCGCTGCCAGCCTTGGCCATGAC
GCCATCAATGCGCTACTGCTACTTCAGAAGGCTGCCGTTAATTCGCTTGA
TGGCGAGGACCGCACGCCTCTTCATCTAGCAGCTGGGAAAGACTCTCTTG
CTGGTGTCAAAGCTCTGGTCTCTGCCCACGCGGATCTTCGCCTCCGCTTC
GGTGACGCTGATGAATCACCGATGGACTGTGCTGCGTGCTTCGGTTATGT
GGACATGATGCTCACGCTGACCCAACACGGGGTTGGCGTAAATGATGCTG
CCGCTACCGGCATGACTCCCTTGCACATCGCTGCCGGTCAAGCCCAACTT
CCTGCGATCGATGCACTTGTGGAGGCTGAGGCCAACGTCGGGGCGGAGGA
ATATGGAACCGGTGGTACGCCGCTACATTTGGCGACAGGGTCTGCCTCGG
TCGATGCTGTGGCTTGTTTATTGAGGCACGGGGCAGACGCAAACAAGCTT
AACGGTGATCGACTCTCCGCTCTCCACCTGGCTGCCAAGGATGGCGCAGC
TGACATGGTACATGCACTCTTAGCCGCGGGTGCTCAGCCAAACCTTCGCT
CAGGTAAAGATTAAAAGACAAGCCTTACCGCTCTGCATATGGCTATCTCC
AACAAGGACACGGGCGTAATCGATGCCCTTGTAGAAGCCGGTGCTGAGGT
TGACGCTCAGGGAGGTGAAACGTGTGAGACACCGTTGCATCTGGCAACCA
AGCTGGGATCATCCGACGCAGTGGCCATTCTCTTGACGCACGATGCTGAC
CCGAAATCGTGATAGGCGCTGTGCTCTTCACCTGGCTGCTCAGAGCGGCA
GCACTGCCATAATTCAGGCACTTGTGGCTGAGGGTGCTCAGCCGAGCCTT
TCTGAAGGCATCAATGGAATGACTTCTTTGGCCCTAGCCGCTGCACGGAG
ACATGGTGAGGCCGCAGCATCGTTAGTCCTGCATCGACCGAGCGCGAATG
CTCAGGACGATCGTCGCCGGACTGCCCTGCACTGTGCTGCCTCCAACGAC
AATGTGGCGGTCATCGATGTGCTTGCCGCCGCCGGGGCTAAAATAGGCGC
GAAGGACAAAAGGGGTTGGACGCCTCTGCATTTCGCATCGTCTGGTGGGT
GCATTGAAGCTGTTGCGGCGCTCATGAAGCACGGGAGTGACGGCAACATC
GTAAATTTCGACTGTTACTCGCCGCTCCACCTTGCAGTATGTAAAGGAGA
TTGCGCTGCTGTAACTGCCGTGTTGGTAGGCGGTGCGATCCCCACTTCAT
CAATGGGAAGTTTAAGCCTCCGTTGGTCCTGGCTGCTGATTCCTCCAATT
TGGATGTGTTGAAAGCGTTGATTAATCACGGAACCGACGTGAACGGTAGC
ACCATGTATGGTACCGCCTTGCACGTAGCTGCTACCAAGAAAGATATCGA
CATAGTCGAAGCACTCATCGCTGCAGGGGCCGACCTCGAGGCGGAGGCAG
CCCACGGGGGTACACCTGTTCATAATGCCCTGCAATGGGGGTGTTCTGAA
GTCGTCCTGGCCCTGCTGAAGCATGGCGCCCACCCGACCAAGCGGATGGC
CAACGGCCGTGGCGGACGTCACGCGGCTGTCGGAGAAAGTAATGTGCTCA
TCGTTAAACTGTTCTCGCCGGTGGTGCAGACATCGATCTTCGTGACTATG
AGGGTTCCACAGCGTTGCACCTGGTCGGTGGCGATTCTGCCGAGGTCGTG
GAAATCCTACTCCAACACGGCGCGGAAGTGGAGTCTCGTGATATGGATGA
TCGAACTCCACTGCACAAGGTCGCCATGACCTACAATAAAAGGTACACCT
CGATCGACGCCCTTGTTGACGGAGGTGCTGCGATTGAGACCCCAGACAAC
TTTGGAAGAACCATCCTCCATCTCGCTTCTTCGAAACACAGGTGTGCAGC
AATGAAGGCTCTTCTTCGGAAGGGTGTTGACGTACTTGCCAAAGATAACG
ACGGACGCTCACCATTGCACCTTGCCGTGTCATGTGAGGCGGATGTCAAT
GCCGTGCGCGAGACTGTGGACCTGCTGTTGAGATAGGGCGCAGACGAAAC
TTCCAAAGACACCGTCGAATACGAGGACGTCGAGGACGAGCCATACGTGG
GCCGCACCCCGGTAGATGTTTGGAGGGCTCTCGCTGAGATGAATTACGCT
TGGGCTAGTTCGGCGGCTCCCATTCGCAGGCTCTTGGTGGGCGCTCAGAA
GGACAGAACATGGCGTTGA
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Coding sequence (CDS) from alignment at Scaffold_129:332943..335511-

>EsuBft95_16a-0001 ID=EsuBft95_16a-0001|Name=EsuBft95_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2130bp|location=Sequence derived from alignment at Scaffold_129:332943..335511- (Ectocarpus subulatus male Bft15b)
ATGACTGATGACGGAAAGAGCACTACTTCCACACAGAGTATTCGGACCAT
CTTGCAAGGGTCCGACGGCGCTATATTCGACCTCCTCTGTGCCGGGGCCT
CGAATCAGCAGTGGACAGAGTGGCTTCGGACTCCGGTGGAATATGCTGTG
GCTGCTGGCAATTTGGACCTCGTTGTCAAGCTTGCCCAAGCGGGGCAAGC
GGGGGCAAGAAACAGTGCTATGCCCTCGGCTGTGAGAAGAGGCCACGATG
CCGAGCCAGACGAGCGTGGCAACACTCCTCTTCATATCGCTGCCAGCCTT
GGCCATGACGCCATCAATGCGCTACTGCTACTTCAGAAGGCTGCCGTTAA
TTCGCTTGATGGCGAGGACCGCACGCCTCTTCATCTAGCAGCTGGGAAAG
ACTCTCTTGCTGGTGTCAAAGCTCTGGTCTCTGCCCACGCGGATCTTCGC
CTCCGCTTCGGTGACGCTGATGAATCACCGATGGACTGTGCTGCGTGCTT
CGGTTATGTGGACATGATGCTCACGCTGACCCAACACGGGGTTGGCGTAA
ATGATGCTGCCGCTACCGGCATGACTCCCTTGCACATCGCTGCCGGTCAA
GCCCAACTTCCTGCGATCGATGCACTTGTGGAGGCTGAGGCCAACGTCGG
GGCGGAGGAATATGGAACCGGTGGTACGCCGCTACATTTGGCGACAGGGT
CTGCCTCGGTCGATGCTGTGGCTTGTTTATTGAGGCACGGGGCAGACGCA
AACAAGCTTAACGGTGATCGACTCTCCGCTCTCCACCTGGCTGCCAAGGA
TGGCGCAGCTGACATGACAAGCCTTACCGCTCTGCATATGGCTATCTCCA
ACAAGGACACGGGCGTAATCGATGCCCTTGTAGAAGCCGGTGCTGAGGTT
GACGCTCAGGGAGGTGAAACGTGTGAGACACCGTTGCATCTGGCAACCAA
GCTGGGATCATCCGACGCAGTGGCCATTCTCTTGACGCACGATGCTGACC
CGAAATCCACTGCCATAATTCAGGCACTTGTGGCTGAGGGTGCTCAGCCG
AGCCTTTCTGAAGGCATCAATGGAATGACTTCTTTGGCCCTAGCCGCTGC
ACGGAGACATGGTGAGGCCGCAGCATCGTTAGTCCTGCATCGACCGAGCG
CGAATGCTCAGGACGATCGTCGCCGGACTGCCCTGCACTGTGCTGCCTCC
AACGACAATGTGGCGGTCATCGATGTGCTTGCCGCCGCCGGGGCTAAAAT
AGGCGCGAAGGACAAAAGGGGTTGGACGCCTCTGCATTTCGCATCGTCTG
GTGGGTGCATTGAAGCTGTTGCGGCGCTCATGAAGCACGGGAGTGACGGC
AACATCGTAAATTTCGACTGTTACTCGCCGCTCCACCTTGCAGTATGTAA
AGGAGATTGCGCTGCTGTAACTGCCGTGTTGGTAGGCGGGGCCGACCTCG
AGGCGGAGGCAGCCCACGGGGGTACACCTGTTCATAATGCCCTGCAATGG
GGGTGTTCTGAAGTCGTCCTGGCCCTGCTGAAGCATGGCGCCCACCCGAC
CAAGCGGATGGCCAACGGCCGTGGCGGACGTCACGCGGCTGTCGGAGAAA
ACATCGATCTTCGTGACTATGAGGGTTCCACAGCGTTGCACCTGGTCGGT
GGCGATTCTGCCGAGGTCGTGGAAATCCTACTCCAACACGGCGCGGAAGT
GGAGTCTCGTGATATGGATGATCGAACTCCACTGCACAAGGTCGCCATGA
CCTACAATAAAAGGTACACCTCGATCGACGCCCTTGTTGACGGAGGTGCT
GCGATTGAGACCCCAGACAACTTTGGAAGAACCATCCTCCATCTCGCTTC
TTCGAAACACAGGTGTGCAGCAATGAAGGCTCTTCTTCGGAAGGGTGTTG
ACGTACTTGCCAAAGATAACGACGGACGCTCACCATTGCACCTTGCCGTG
TCATACGAAACTTCCAAAGACACCGTCGAATACGAGGACGTCGAGGACGA
GCCATACGTGGGCCGCACCCCGGTAGATGTTTGGAGGGCTCTCGCTGAGA
TGAATTACGCTTGGGCTAGTTCGGCGGCTCCCATTCGCAGGCTCTTGGTG
GGCGCTCAGAAGGACAGAACATGGCGTTGA
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