|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G873 |
| ProteomeId | EsuBft1019_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 75 |
| Evalue | 1.08e-73 |
| EggNOG OGs | COG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437 |
| KEGG Reaction | R00851,R03875,R03938,R04866,R04867,R09380 |
| KEGG Pathway | ko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202 |
| KEGG Module | M00089 |
| EC | 2.1.1.43,2.3.1.15,3.6.4.12 |
| Description | acetylation-dependent protein binding |
| COG category | BK |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1019_5a-0001 ID=EsuBft1019_5a-0001|Name=EsuBft1019_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=753bp|location=Sequence derived from alignment at Scaffold_392:48739..49534+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGAAGAAGTTTACTGATAAGTGGAGATTGTCTGCCAACGTTAAGAA
GAGTGCCGTCATGGTATGCAACGAGAACAAGGAGGAACCAGTAGGACATG
GATGGAAGTGGGGGATCGAGGAGATTGCAGTAGCGGACCAGTACACATAC
CTTGGAGTAGAGATCGCAAAAGATTGCTCGTGGAATGCACACATGTCCAA
GGTATCGGAAAAGGGCAAAGCACGAGCAGGGAAGCTGCATCCAATACTCG
CAAACCGGCACCTCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTA
ATCGTACCGCCGCTAGAGTACGCCGGAGAAGTATGGGAAGGAAATAAGAA
GGTAGTGAAAGAACTCGAGGCGGCGCAGATGAAAGCAGCGAAAATCATCC
AAGGATGCTCCAAGCGCACAAGCAATGCAGCCGTCAGGGCAGAACTGGGG
ATCCAACTCCTACGGTCGGGAAGAGACGCGAGGAAGCTGACCTGGCAGTA
TCGCATNTGCAGCCACGCGAGGAAGCTGACCTGGCAGTATCGCATGTGCG
GGATGGGAGAGGAGAGGTTGCCGAGAATTGTATGGGAGGCGAAGTGGGCA
AACAAAAAGAGGGGTAGACAACCCACGGAATGGGTCAAGGTTGTAGAGGA
CGTATGGAAGGGGCTCGACATCGACGAAGATGAAACGCTGGAAACGGAGA
TTCTAAAGGGGTTCAAGGAAAAGATATCTGTTGCTTTTGCCGAGAGAGAA
NNN back to topprotein sequence of EsuBft1019_5a-0001 >EsuBft1019_5 ID=EsuBft1019_5|Name=EsuBft1019_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=251bp
MAKKFTDKWRLSANVKKSAVMVCNENKEEPVGHGWKWGIEEIAVADQYTY
LGVEIAKDCSWNAHMSKVSEKGKARAGKLHPILANRHLDTRIKLTVLKSV
IVPPLEYAGEVWEGNKKVVKELEAAQMKAAKIIQGCSKRTSNAAVRAELG
IQLLRSGRDARKLTWQYRXCSHARKLTWQYRMCGMGEERLPRIVWEAKWA
NKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEILKGFKEKISVAFAERE
X back to topmRNA from alignment at Scaffold_392:48739..49534+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1019_5a-0001 ID=EsuBft1019_5a-0001|Name=EsuBft1019_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=796bp|location=Sequence derived from alignment at Scaffold_392:48739..49534+ (Ectocarpus subulatus male Bft15b)
ATGGCGAAGAAGTTTACTGATAAGTGGAGATTGTCTGCCAACGTTAAGAA
GAGTGCCGTCATGGTATGCAACGAGAACAAGGAGGAACCAGTAGGACATG
GATGGAAGTGGGGGATCGAGGAGATTGCAGTAGCGGACCAGTACACATAC
CTTGGAGTAGAGATCGCAAAAGATTGCTCGTGGAATGCACACATGTCCAA
GGTATCGGAAAAGGGCAAAGCACGAGCAGGGAAGCTGCATCCAATACTCG
CAAACCGGCACCTCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTA
ATCGTACCGCCGCTAGAGTACGCCGGAGAAGTATGGGAAGGAAATAAGAA
GGTAGTGAAAGAACTCGAGGCGGCGCAGATGAAAGCAGCGAAAATCATCC
AAGGATGCTCCAAGCGCACAAGCAATGCAGCCGTCAGGGCAGAACTGGGG
ATCCAACTCCTACGGTCGGGAAGAGACGCGAGGAAGCTGACCTGGCAGTA
TCGCATNTGCAGCCGTGAGGGCAGAATTGGGGATCCAATCCCTACGGTCG
GGAAGAGACGCGAGGAAGCTGACCTGGCAGTATCGCATGTGCGGGATGGG
AGAGGAGAGGTTGCCGAGAATTGTATGGGAGGCGAAGTGGGCAAACAAAA
AGAGGGGTAGACAACCCACGGAATGGGTCAAGGTTGTAGAGGACGTATGG
AAGGGGCTCGACATCGACGAAGATGAAACGCTGGAAACGGAGATTCTAAA
GGGGTTCAAGGAAAAGATATCTGTTGCTTTTGCCGAGAGAGAANNN back to topCoding sequence (CDS) from alignment at Scaffold_392:48739..49534+ >EsuBft1019_5a-0001 ID=EsuBft1019_5a-0001|Name=EsuBft1019_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=753bp|location=Sequence derived from alignment at Scaffold_392:48739..49534+ (Ectocarpus subulatus male Bft15b)
ATGGCGAAGAAGTTTACTGATAAGTGGAGATTGTCTGCCAACGTTAAGAA
GAGTGCCGTCATGGTATGCAACGAGAACAAGGAGGAACCAGTAGGACATG
GATGGAAGTGGGGGATCGAGGAGATTGCAGTAGCGGACCAGTACACATAC
CTTGGAGTAGAGATCGCAAAAGATTGCTCGTGGAATGCACACATGTCCAA
GGTATCGGAAAAGGGCAAAGCACGAGCAGGGAAGCTGCATCCAATACTCG
CAAACCGGCACCTCGATACACGCATCAAATTGACGGTTTTGAAGAGCGTA
ATCGTACCGCCGCTAGAGTACGCCGGAGAAGTATGGGAAGGAAATAAGAA
GGTAGTGAAAGAACTCGAGGCGGCGCAGATGAAAGCAGCGAAAATCATCC
AAGGATGCTCCAAGCGCACAAGCAATGCAGCCGTCAGGGCAGAACTGGGG
ATCCAACTCCTACGGTCGGGAAGAGACGCGAGGAAGCTGACCTGGCAGTA
TCGCATNTGCAGCCACGCGAGGAAGCTGACCTGGCAGTATCGCATGTGCG
GGATGGGAGAGGAGAGGTTGCCGAGAATTGTATGGGAGGCGAAGTGGGCA
AACAAAAAGAGGGGTAGACAACCCACGGAATGGGTCAAGGTTGTAGAGGA
CGTATGGAAGGGGCTCGACATCGACGAAGATGAAACGCTGGAAACGGAGA
TTCTAAAGGGGTTCAAGGAAAAGATATCTGTTGCTTTTGCCGAGAGAGAA
NNN back to top
|