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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D7FVB8 |
ProteomeId | EsuBft99_3 |
Protein domains | PTHR13748 |
Protein domains | IPR003495 |
Protein domains | IPR027417 |
Protein domains | IPR011629 |
Owner | apollo_admin@sb-roscoff.fr |
Note | cobw domain-containing protein 1 os:mus musculus gn:cbwd1 pe:2 sv:1 [Automatic annotation] |
Nb exon | 4 |
Max annot lvl | 2759|Eukaryota |
Length | 2070 |
Hectar predicted targeting category | other localisation |
Evalue | 2.11e-315 |
EggNOG OGs | COG0523@1|root,KOG2743@2759|Eukaryota |
Ec32 ortholog description | CobW/HypB/UreG domain |
Ec32 ortholog | Ec-14_000520.1 |
Date last modified | 2016-06-15 |
Date creation | 2016-06-15 |
Preferred name | CBWD1 |
KEGG ko | ko:K12605 |
KEGG Pathway | ko03018,map03018 |
GOs | GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 |
Description | ATP binding |
COG category | F |
BRITE | ko00000,ko00001,ko03019 |
Cross References
External references for this mRNA
Database | Accession |
GO | 0005737 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft99_3a-0001 ID=EsuBft99_3a-0001|Name=EsuBft99_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2070bp|location=Sequence derived from alignment at Scaffold_501:41833..45440- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TCACACACCAACACACCTGCAGCAGCAGGCAGAGACAGAGAAACAGAGAA AGCAAATGGAAAGTGACGACGACTACCCTCCTGACCTGGTGCCCGCGCAG GAGTTGTTTTCGCTGAGCTCAAACGATACGCTACCAGAGGACACAAGCTC ATCACAGCCTACACCCGTTGCAGAGGTTGCCGTAGGGGTAGAGAGGCCAT CAACAGCACCAGGAGCTGTGCCGGTAACGATCGTAACAGGCTTCCTGGGA GCAGGAAAGACGACCCTGCTCAATTACATACTCACCCAGGACCATGGTCG ACGCATCGCGGTGATTGAGAACGAGGTTGGAGACAGCATGGACATCGAGT CGCTTATCGCGAAGGATGGCGCCGACGGATCGGTCTTGGCGGACAACCTT TTCGAGCTCAGGAACGGTTGTATTTGCTGCGCGGTCAAGGACGACCTCGT CACCACCCTGGAGATGTTGCTTCAACGAAGGAACAAGTTCGACTACATCA TCATCGAGACTACAGGCCTCGCCAACCCGGGTCCTGTAGCGAGTGTTTTT TGGCTTGACGAGGCCTTGGAAAGCGCTCTGCGGCTCGACAGCATAGTCAC CTTGGTGGACGCCAAGAATTTTGTGCGACAGCTGCAGCGCGTTCCGGGTG AGGGAGCCGAGGCCGGCGCGGAGGGAGAGGAGCAGTCCGGGACACGCCCC AAAAATGAGGCTGCCATGCAAGTGGCCTACGCTGACCGCGTCCTCATCAA CAAGAGTGACCTCGTGTCTACCGAAACCCTCAAGGACGTGGTTGGACGAG TGCGAACAATCAACGCTCTAGCCGAAGTTCGTTGCACCAAGCGCTCCGCG GTGGACCTAGCGTGGATTTTGGACACCGAATGCTTCTCCTCGGAGCTGGC GGCAGCGGTAGACCCTTCGCTCGCACCGCCTGGGGCTTTGCTAGGCACAG CCCAACAGAACGAAGGCGGCAGAGGCAGTAGCGCAGCGGATCGAGGGATC GCTCGAACGGGGTCTCGTCCCGGGGATGCACATGTTCATGCCCGTGACGT TGAGCCGAGAGCGGGGCACACGGAGAGCTTTCACCACCATGCCGACGGAG AAGCATGCGATGAGTGCGCCGCGGTAGAAGGGCCTGGCGGCACGGCTTGC TCTGTGCATGACCCTTCCGTGACCACCTGCGCGGTAGACTTGCCAGGTTC GTTGGACCTCTCGCGTCTGGAGCGGTGGCTTGGGGGCTTGCTATGGGACC CACCCCCAGGAGGGACGGAGGTGTATCGCGTCAAGGGGGTGGTTAGCGTG GAGGGTAGAGGCGAGCGCTTCGTCGTCCAGGGTGTGGCTGACCTGTTCGA GGTGACGCCGGTAGAGGTGATCGGCAGTGCTTGGCAAGAAGGAGAGGCAC GACGGTGCAAAGTGGTGTTCATCGGGCGGTTGCTGTCCTCGAGGGACCTC GAGCGAGGCATAAGGTCGTGTATGGTTCAGGACTAGAGATCGGTGTTGTT TTTCTTCGCCGGAGAATGGTATGCCCTTCACACCATTTGTTAGCGCGGAG GGACACACACGTGCGTGTTCGTGTTTTCCTTCAAACGTTGAAGCTCGTGC CTGACACGAGCCGAGCTGATGTTGTTGTCTCCTGGCTTGGTTGGTGATGC TGGGTAGGCCTTGCATCGCCGAACCTAGCAAGAACATTTTGTATTGCTCC CGTGAAGTGGTCGCGTAAGCCGTATGGTACTTGGTGTGAAGCGGATGAGG AAATGCATTCGGCATTCGTGGTGGGTGTCCACGTGTATTTCTACAGCCAT AGGGCTTCTTGGGGTGAATCAAGATTGATTAAGCGACACCCGAACCCTAC CGTAGTCTCGAGTATGTAAGTGCTAGTGTTGCCTTGCCTGCTTGCTGTGT ACAATAGCAAGTTACACCCACGAGACTCACCAAGAATTCATGTTCTGTTC CTGCAACGTAGACGAGGTATCTAAGTGGAAATGGTGCATTGGAGCGCCGT TAAAAAATGTTTCAGTGTTGACGTGTGTACCCCATCTATTCTGACACCAG ACTGCGCACAGGTGTCTATG back to topprotein sequence of EsuBft99_3a-0001 >EsuBft99_3 ID=EsuBft99_3|Name=EsuBft99_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=476bp
MESDDDYPPDLVPAQELFSLSSNDTLPEDTSSSQPTPVAEVAVGVERPST APGAVPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESL IAKDGADGSVLADNLFELRNGCICCAVKDDLVTTLEMLLQRRNKFDYIII ETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGEG AEAGAEGEEQSGTRPKNEAAMQVAYADRVLINKSDLVSTETLKDVVGRVR TINALAEVRCTKRSAVDLAWILDTECFSSELAAAVDPSLAPPGALLGTAQ QNEGGRGSSAADRGIARTGSRPGDAHVHARDVEPRAGHTESFHHHADGEA CDECAAVEGPGGTACSVHDPSVTTCAVDLPGSLDLSRLERWLGGLLWDPP PGGTEVYRVKGVVSVEGRGERFVVQGVADLFEVTPVEVIGSAWQEGEARR CKVVFIGRLLSSRDLERGIRSCMVQD back to topmRNA from alignment at Scaffold_501:41833..45440- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft99_3a-0001 ID=EsuBft99_3a-0001|Name=EsuBft99_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3608bp|location=Sequence derived from alignment at Scaffold_501:41833..45440- (Ectocarpus subulatus male Bft15b) TCACACACCAACACACCTGCAGCAGCAGGCAGAGACAGAGAAACAGAGAA
AGCAAATGGAAAGTGACGACGACTACCCTCCTGACCTGGTGCCCGCGCAG
GAGTTGTTTTCGCTGAGCTCAAACGATACGCTACCAGAGGACACAAGCTC
ATCACAGCCTACACCCGTTGCAGAGGTTGCCGTAGGGGTAGAGAGGCCAT
CAACAGCACCAGGAGCTGTGCCGGTAACGATCGTAACAGGCTTCCTGGGA
GCAGGAAAGACGACCCTGCTCAATTACATACTCACCCAGGACCATGGTCG
ACGCATCGCGGTGATTGAGAACGAGGTTGGAGACAGCATGGACATCGAGT
CGCTTATCGCGAAGGTGAGGAGAAACGAACAAGACGGGCCCTGCCTGTTC
GTGCGCCATGGCAATTACAGGTGTCAGTAAATGGCACTCTGTACAGCAGT
TAAGCTGTACCTAGTCGTTTACATGGGGCGTTGAGATATTTAGCAGCACT
GCCATAGGCCTCTGTACGGACTGCTGTAGCCAGGCACTGCCGTGACCTTG
TGGTAGGTCATCCTACATTCCACATTTATTTTTATAGGTTTTGAGGCATT
CGTTTGACAAAACGCTGCCTTGTCGTCCGTTCAAAGAGCACTTTCAACAT
TAAACACCATTTGGCAGTTATATGGAGGTCAGGATGGAAGGATATGGTAA
ATTCATGTGCTATGGACTCACATGTGTGGCCGCTGGGGAGCGTGGCGGGA
ACGCGGCAGGCCACGGCAGGCAATCGAGGGCATGGTACGACAGGCTGGAT
CATGAGTGTGGCGAAGCTCGTGGCGGGGGCGTACATATCGCCTATCGCCT
TCAGGATCCACGCCCGAGGATTCCCCCCTGCCGCAGCTTTCTGGACCCGA
GCGACTACCCCCGCTTTCAGAGAATCGCAACGATCTAGAAGCAACGTGGT
GCTCTGTGAGCTGGAGGCATCTGCGTGGTGGTACTGGAAAACCTACGCAA
TTGCCAGAGTGTCGGTGTCATCGCGCGGTCACCGTTGTGGGCGGTGCCGC
TGTACCTGTCACTCCTGTTGCTTCCACGCTGTCGCCGTGGTCGTTGTTGA
CGCCAATGTGAAAAGAGAAAAGACGGAATCGTCCTGGACAGATGAGACGT
CGCAAAGATTGTATGTACCCTTTATGATAGGGGTCGCCACAGTCAGTTGC
AGCTCATAGTCCAATACGTCGGCGATGTACAGACACAACCCGCCGTTTGC
TCTTCACACTAGTCCCGTGTATTCGGTTGTAAGCCATGACTACCTACAAC
ACGTGCCGTTCCCGTTGTTGCAACAGGATGGCGCCGACGGATCGGTCTTG
GCGGACAACCTTTTCGAGCTCAGGAACGGTTGTATTTGCTGCGCGGTCAA
GGACGACCTCGTCACCACCCTGGAGATGTTGCTTCAACGAAGGAACAAGT
TCGACTACATCATCATCGAGACTACAGGCCTCGCCAACCCGGTGAGAGCA
CGATTCGCCTCTTCAGCGGGTAGATGTGTGGGCACCGTAGCGCAAGCGCG
GCCATTTAGTCTCCACACTGCATTGCCTAGAGTGTCATCTCGAAAAGAAT
ATCCGTTTTCAACCGTGTACCACCTTGCTGAGTAGAATCGTGCACCGTGC
GGTTTGTGTGTACATGTAGGCTGTCGATGCCCTATTCTACAATGCACAAA
CGAACACCATTCAGATGCAGTAGTCGAACCAGTTTGTTTATGACATGTTA
GGAAGCTGACAATGACGTCGAATTTTTGTGCTGCCCGTCGCTCTTTCCCA
TTTTCCAGGGTCCTGTAGCGAGTGTTTTTTGGCTTGACGAGGCCTTGGAA
AGCGCTCTGCGGCTCGACAGCATAGTCACCTTGGTGGACGCCAAGAATTT
TGTGCGACAGCTGCAGCGCGTTCCGGGTGAGGGAGCCGAGGCCGGCGCGG
AGGGAGAGGAGCAGTCCGGGACACGCCCCAAAAATGAGGCTGCCATGCAA
GTGGCCTACGCTGACCGCGTCCTCATCAACAAGGTGCGGTCGTATTGAAA
GACGGCACACCAAAAGGAGCACGTGGCGTGCAGGCGCGAGCGACGCACCC
CAAAGCAGCTGCGTTAATGTTGAAACGTTCAACCCGAGAAAATAACTGTA
TAAATTTTACAGCAGTGACAGCAGCGACATGCATGGAGTTCGCTGTTGCG
TTGGTGTCCTCCCTCAACCCTCCCCGCCTATGCTGCTGCTTTGCTTCTTG
TGTTGTCTCTCTCTCTCTCGGGCGACGTCTCCGTTATCGAAGAGTGACCT
CGTGTCTACCGAAACCCTCAAGGACGTGGTTGGACGAGTGCGAACAATCA
ACGCTCTAGCCGAAGTTCGTTGCACCAAGCGCTCCGCGGTGGACCTAGCG
TGGATTTTGGACACCGAATGCTTCTCCTCGGAGCTGGCGGCAGCGGTAGA
CCCTTCGCTCGCACCGCCTGGGGCTTTGCTAGGCACAGCCCAACAGAACG
AAGGCGGCAGAGGCAGTAGCGCAGCGGATCGAGGGATCGCTCGAACGGGG
TCTCGTCCCGGGGATGCACATGTTCATGCCCGTGACGTTGAGCCGAGAGC
GGGGCACACGGAGAGCTTTCACCACCATGCCGACGGAGAAGCATGCGATG
AGTGCGCCGCGGTAGAAGGGCCTGGCGGCACGGCTTGCTCTGTGCATGAC
CCTTCCGTGACCACCTGCGCGGTAGACTTGCCAGGTTCGTTGGACCTCTC
GCGTCTGGAGCGGTGGCTTGGGGGCTTGCTATGGGACCCACCCCCAGGAG
GGACGGAGGTGTATCGCGTCAAGGGGGTGGTTAGCGTGGAGGGTAGAGGC
GAGCGCTTCGTCGTCCAGGGTGTGGCTGACCTGTTCGAGGTGACGCCGGT
AGAGGTGATCGGCAGTGCTTGGCAAGAAGGAGAGGCACGACGGTGCAAAG
TGGTGTTCATCGGGCGGTTGCTGTCCTCGAGGGACCTCGAGCGAGGCATA
AGGTCGTGTATGGTTCAGGACTAGAGATCGGTGTTGTTTTTCTTCGCCGG
AGAATGGTATGCCCTTCACACCATTTGTTAGCGCGGAGGGACACACACGT
GCGTGTTCGTGTTTTCCTTCAAACGTTGAAGCTCGTGCCTGACACGAGCC
GAGCTGATGTTGTTGTCTCCTGGCTTGGTTGGTGATGCTGGGTAGGCCTT
GCATCGCCGAACCTAGCAAGAACATTTTGTATTGCTCCCGTGAAGTGGTC
GCGTAAGCCGTATGGTACTTGGTGTGAAGCGGATGAGGAAATGCATTCGG
CATTCGTGGTGGGTGTCCACGTGTATTTCTACAGCCATAGGGCTTCTTGG
GGTGAATCAAGATTGATTAAGCGACACCCGAACCCTACCGTAGTCTCGAG
TATGTAAGTGCTAGTGTTGCCTTGCCTGCTTGCTGTGTACAATAGCAAGT
TACACCCACGAGACTCACCAAGAATTCATGTTCTGTTCCTGCAACGTAGA
CGAGGTATCTAAGTGGAAATGGTGCATTGGAGCGCCGTTAAAAAATGTTT
CAGTGTTGACGTGTGTACCCCATCTATTCTGACACCAGACTGCGCACAGG
TGTCTATG back to topCoding sequence (CDS) from alignment at Scaffold_501:41833..45440- >EsuBft99_3a-0001 ID=EsuBft99_3a-0001|Name=EsuBft99_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1431bp|location=Sequence derived from alignment at Scaffold_501:41833..45440- (Ectocarpus subulatus male Bft15b) ATGGAAAGTGACGACGACTACCCTCCTGACCTGGTGCCCGCGCAGGAGTT GTTTTCGCTGAGCTCAAACGATACGCTACCAGAGGACACAAGCTCATCAC AGCCTACACCCGTTGCAGAGGTTGCCGTAGGGGTAGAGAGGCCATCAACA GCACCAGGAGCTGTGCCGGTAACGATCGTAACAGGCTTCCTGGGAGCAGG AAAGACGACCCTGCTCAATTACATACTCACCCAGGACCATGGTCGACGCA TCGCGGTGATTGAGAACGAGGTTGGAGACAGCATGGACATCGAGTCGCTT ATCGCGAAGGATGGCGCCGACGGATCGGTCTTGGCGGACAACCTTTTCGA GCTCAGGAACGGTTGTATTTGCTGCGCGGTCAAGGACGACCTCGTCACCA CCCTGGAGATGTTGCTTCAACGAAGGAACAAGTTCGACTACATCATCATC GAGACTACAGGCCTCGCCAACCCGGGTCCTGTAGCGAGTGTTTTTTGGCT TGACGAGGCCTTGGAAAGCGCTCTGCGGCTCGACAGCATAGTCACCTTGG TGGACGCCAAGAATTTTGTGCGACAGCTGCAGCGCGTTCCGGGTGAGGGA GCCGAGGCCGGCGCGGAGGGAGAGGAGCAGTCCGGGACACGCCCCAAAAA TGAGGCTGCCATGCAAGTGGCCTACGCTGACCGCGTCCTCATCAACAAGA GTGACCTCGTGTCTACCGAAACCCTCAAGGACGTGGTTGGACGAGTGCGA ACAATCAACGCTCTAGCCGAAGTTCGTTGCACCAAGCGCTCCGCGGTGGA CCTAGCGTGGATTTTGGACACCGAATGCTTCTCCTCGGAGCTGGCGGCAG CGGTAGACCCTTCGCTCGCACCGCCTGGGGCTTTGCTAGGCACAGCCCAA CAGAACGAAGGCGGCAGAGGCAGTAGCGCAGCGGATCGAGGGATCGCTCG AACGGGGTCTCGTCCCGGGGATGCACATGTTCATGCCCGTGACGTTGAGC CGAGAGCGGGGCACACGGAGAGCTTTCACCACCATGCCGACGGAGAAGCA TGCGATGAGTGCGCCGCGGTAGAAGGGCCTGGCGGCACGGCTTGCTCTGT GCATGACCCTTCCGTGACCACCTGCGCGGTAGACTTGCCAGGTTCGTTGG ACCTCTCGCGTCTGGAGCGGTGGCTTGGGGGCTTGCTATGGGACCCACCC CCAGGAGGGACGGAGGTGTATCGCGTCAAGGGGGTGGTTAGCGTGGAGGG TAGAGGCGAGCGCTTCGTCGTCCAGGGTGTGGCTGACCTGTTCGAGGTGA CGCCGGTAGAGGTGATCGGCAGTGCTTGGCAAGAAGGAGAGGCACGACGG TGCAAAGTGGTGTTCATCGGGCGGTTGCTGTCCTCGAGGGACCTCGAGCG AGGCATAAGGTCGTGTATGGTTCAGGACTAG back to top
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