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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | EsuBft999_6 |
Protein domains | Coil |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 1 |
Length | 268 |
Hectar predicted targeting category | mitochondrion |
Date last modified | 2016-06-13 |
Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft999_6a-0001 ID=EsuBft999_6a-0001|Name=EsuBft999_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2681bp|location=Sequence derived from alignment at Scaffold_463:38851..44220- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CTCAACGTGGTCGTGGACAAGCGTGTCAACGACAGAACCTTCACCTATCT CTAGGAGCAAGCTACCGCCCACGGCATCACTCCTTGAAACTTGGCGTCAG CTGGCATTTCACGAGGACACCATGTCCAGCGGCAATGTGGAACTCCTGGG CGACAATGTGGAAATTCTGGATTACGAACCGGAGGGCGAGGCTCCCACCG CAGAGCAGTTTCCAGCGGCGGGTGCAGAAGACGAGACCCCCCCCATGCCC ATGGTGTTCACCGTCGATAATTTGCTGGACAACGTCGCCACAGCAGATCC GGCGGAACTGGAGCGGCCCTACAACACCGGACGTNATCGATCGTAGCTAC CCTCTCTCTGGCCCTGTTCTTGTTAACACAGAGGACACCATGTCCAGCGG CAATGTGGAACTCCTGGGCGACAATGTGGAAATTCTGGATTACGAACCGG AGGGCGAGGCTCCCACCGCAGAGCAGTTTCCAGCGGCGGGTGCAGAAGAC GAGACCCCCCCCATGCCCATGGTGTTCACCGTCGATAATTTGCTGGACAA CGTCGCCACAGCAGATCCGGCGGAACTGGAGCGGCCCTACAACACCGGAC GTGTCTCTCTGGAGGATATTGTAGAAGCGGCCCATCTGTCGTCCGATTCC CCCCTTTTCGTTCCTCTTTTCTCGCTCCCGCCGGAAGACAAATTAATCCT CTTGCCCCAGGACGAGTTTATGGCGTACCAAAGGTTGAACGAGATGTGGT GCGACGGTCTTGCCGGGAAGATAGCAGAGGCGGAGGCGCGAGAGCAGGCG AAGCGCGAGGACGCGGAGCGCTTGGCGGAACGGGAGGCTGCTCTGGCCGC TGCGGCGAGGAAGCAGGAGGAGGAGCGTGAGGCTGTTCGGGCTGCTGCGG CGAGGAAGCAGGAGGAGGAACGTGAGGCTGCTCTGGCTGCTGCGGCGAGG AAGCAGGAGGAGGAGCGTGCGGCTGTTCTGGCGGAGCGTGAGGCGTATCT CCAAGCGGCTAGGGCGAAGCAGGGGGCGCTCCGATCGCGGTGAAGGAGCT GGAGCCCCGCCACCAGAACCCGCGAGCAGCCCTCCACCCCCGTCGCCGTG TTATCGTCCCCCCCCCCACGCAATCCCAGGTGCCCCTTGGTTCCCATCTT GCCGCCTCGCCGCACGAGAAGGAGCGGGAGGTGGCGGCTTCTCCGACGAT CGAGAAGGAGCGGGAGAGGACAGCGACTCCGGAGTTTTCGGTGACTTTGG GTCTTCCGGCCGGTGCTGAAGACGGAGCATCGTTTGCGGCGGCAACCACG GTGTACGAGTTCCCCGTTGGAGGTACAGCGTTCCTGTCCCGCCCGCTGGA GATGCCTGCAACAGGTGTCACCTTCCACGATGAGGACAAATTGGCAGCTC TTCTTGCATGGGCTGGCATCAAACAACTTGGCCGTGCGCAATTCCCCCCA CCGCACACCGTTGCTTTAGGGCATATCTATCGCACCCCGTACATCGCGAA ACTTCCGCCTTCTTCGCGGCAGTCCGTGTTCCAGCTTTTGTTCGCTCTCC GTCGTGCCACCTTTCCTGAAGGTCCTCAAGGAACGTCGGTGGTGACCCAA GATTGAGGACTCCAGCTGCCCCTTGCTCGTGCTGCCTCGACCAACGAATT TAAGCACGATCTGCAAGCCCCCCGGCAGGCCTCTTCACGCCCTGCGCATG GTTTTGGAGAGGACAAGGACTTCAGTAGGTCGGCGGCTCCGGTGTCCAAG AGCTAGAAGAACCGTTAGGGCGACCGGGATTCGACGCCCAAGAACGGGAC GGACGACCACCACCGCCCCACCCAGTCTTCGCGAGGGCGCGGCGTCGGAG ATGACAGGCGAGGGCGAGCCGTGGGGAACCAGCCTACCGGGTCTTCGCCG GCGAGCCGCCATCGCCGGAGCAGGAGTCGGAGCGCAGAACGTCAACAGCG CACCAATCCTTCGCCTAGGCATGGGCGCAGCCGGAGCGGAGACCGTCGTG GGAGAAACACGCCTCCGTCTAGGCGTAGCCGCAGCCGGAGCCAGAACCAG AGCGGGGGCAATAGCAGGGCGATCAGCACTGACAGCGGTCGCGGCGGAAA AGGGCGACGGAGGTTAGGCCACGGTAGAAAACCATCTGCGCAAGGAACCG GCAGGGCCCTCGACGTACGCCTTCTTCATCCAGAAATTGGCGGCCGCCTG GGACACTCAAGACAAGAGCTCGGGGATTGATCGTCTTCGCAGTTTTGGCG TATCCAACGGCGAGACTTAAGGAGAATACATTCGTCGTTGTAAGGCTCTG GCCATGACCGTCATGGTTTCCCACCACGCGTTCAAGCCTTCGGATGCGCA AGTGCAGATAGCTGTTCGAGACTCCATGTTGAAGCAGTTTCCGGAAGTGT CTGGGCAGGTGTACAAGGATGAGCAGCTCTCCATGGAAGCCCCTTTTGGG CGACATGCTTCGTGTCTGGATGATATGTGGGATGTGTTGGACAAGCGTGC GTTCGCGCACACGCCGGCGGTGCATGGAGATGATTTCTTTTCGGTATCTT CCACGAATGCTAGGAGTTCGTCTGCTGTTTCGCGTGCTGTAGCTTCTTCG GCGTTGCGTTCGACGGTGACCCCTTCGTGGAGCCAAGGTTCTTCGGCCGC CGTGATGAGTGTTGACCCTCTACCTAATGAT back to topprotein sequence of EsuBft999_6a-0001 >EsuBft999_6 ID=EsuBft999_6|Name=EsuBft999_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=302bp
MWNSWATMWKFWITNRRARLPPQSSFQRRVQKTRPPPCPWCSPSIICWTT SPQQIRRNWSGPTTPDVIDRSYPLSGPVLVNTEDTMSSGNVELLGDNVEI LDYEPEGEAPTAEQFPAAGAEDETPPMPMVFTVDNLLDNVATADPAELER PYNTGRVSLEDIVEAAHLSSDSPLFVPLFSLPPEDKLILLPQDEFMAYQR LNEMWCDGLAGKIAEAEAREQAKREDAERLAEREAALAAAARKQEEEREA VRAAAARKQEEEREAALAAAARKQEEERAAVLAEREAYLQAARAKQGALR SR back to topmRNA from alignment at Scaffold_463:38851..44220- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft999_6a-0001 ID=EsuBft999_6a-0001|Name=EsuBft999_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5370bp|location=Sequence derived from alignment at Scaffold_463:38851..44220- (Ectocarpus subulatus male Bft15b) CTCAACGTGGTCGTGGACAAGCGTGTCAACGACAGAACCTTCACCTATCT
CTAGGAGCAAGCTACCGCCCACGGCATCACTCCTTGAAACTTGGCGTCAG
CTGGCATTTCACGGTAAGCGGGTGCTGGACGCGGCTTCCACACTGCTGTG
TGTTGTTGCCACGCTTTTTTTTCACACCCACCGGGTTGCTTGTTATTTGG
TCTCACCACCCACGAGAATCTAGGCTTAGCCTCTTATCTGCTTCCTCTCC
TGTAGAGATGCTGACTTGTAATGTTTTTGCGAAGCGCCCGCGGGACTGGG
ACCTTGCAAAAGATACGCGCCTCGGAGGCCATCGCGATGTTTTTTTTTTT
CGTACGTTCGCCGTCCCTCGAAAGCTATTTTGTCTATATCGGCGGTCCAT
GAAGTGATTTCTGTGGCGGATACCCTCTGCATGGAGCGTCCTGAGTTGCT
GGCCTTGTGTAGTGGGACCCGAGATGACAGCATGCTTCCCACGTCTGCTA
CCACCTCTACTGCATTCATGCCGGCGTACCGGCCGATGTCCGCGGATTTT
CCTGTTGTGCTCTCCGATTTGACTCCGCTTGCATCGACTTGGAACGCGAT
ATGTGCACACTAATTGGGTGTCAGCCGCCCCACCAGCCTTCCCTCCATTT
TTCGAAATCGTACTTTTTTTCGGGGAATCGTTCACCCTCAAAGCATTTGA
ATTGGAAACCTTTCAACAGCGCAAACCCACAGAGGTCTTTGCTCGCACTT
CGGCACCAGTTGCGGAGGAACGCCGTGCTGCTCTGCGTGTCTTTTGGTCG
GAAAACCTCGTGTCTACATGTAACACGGACCCTTTTGTGCTGGCTACTAC
TGCTGTTTGTGCGTGGCATGGTGTGCTTTTGGACGCTTTTTCTNATGTGC
ACACTAATTGGGTGTCAGCCGCCCCACCAGCCTTCCCTCCATTTTTCGAA
ATCGTACTTTTTTTCGGGGAATCGTTCACCCTCAAAGCATTTGAATTGGA
AACCTTTCAACAGCGCAAACCCACAGAGGTCTTTGCTCGCACTTCGGCAC
CAGTTGCGGAGGAACGCCGTGCTGCTCTGCGTGTCTTTTGGTCGGAAAAC
CTCGTGTCTACATGTAACACGGACCCTTTTGTGCTGGCTACTACTGCTGT
TTGTGCGTGGCATGGTGTGCTTTTGGACGCTTTTTCTGCTTGGTTGGATC
CGCTTCAAACTCGTGTGCAACAAGCTTTTATCACTGGGCGTATGCTATCT
TGTGGATATCTCCGCCTTCCGCATGGACCTCGGCTTGCTCTTCCCGAAGT
TGCACCCGGCTTTACTGCTTGTGCTGCTCTTGGTGCTGCTGCCTCAACTG
CGGTTGGTTATCCTACATCTGCTGTTTCTGGCCCTGCTGCCCATCGATCG
TAGCTACCCTCTCTCTGGCCCTGTTCTTGTTAACACAGAGGACACCATGT
CCAGCGGCAATGTGGAACTCCTGGGCGACAATGTGGAAATTCTGGATTAC
GAACCGGAGGGCGAGGCTCCCACCGCAGAGCAGTTTCCAGCGGCGGGTGC
AGAAGACGAGACCCCCCCCATGCCCATGGTGTTCACCGTCGATAATTTGC
TGGACAACGTCGCCACAGCAGATCCGGCGGAACTGGAGCGGCCCTACAAC
ACCGGACGTNATCGATCGTAGCTACCCTCTCTCTGGCCCTGTTCTTGTTA
ACACAGAGGACACCATGTCCAGCGGCAATGTGGAACTCCTGGGCGACAAT
GTGGAAATTCTGGATTACGAACCGGAGGGCGAGGCTCCCACCGCAGAGCA
GTTTCCAGCGGCGGGTGCAGAAGACGAGACCCCCCCCATGCCCATGGTGT
TCACCGTCGATAATTTGCTGGACAACGTCGCCACAGCAGATCCGGCGGAA
CTGGAGCGGCCCTACAACACCGGACGTGTCTCTCTGGAGGATATTGTAGA
AGCGGCCCATCTGTCGTCCGATTCCCCCCTTTTCGTTCCTCTTTTCTCGC
TCCCGCCGGAAGACAAATTAATCCTCTTGCCCCAGGACGAGTTTATGGCG
TACCAAAGGTTGAACGAGATGTGGTGCGACGGTCTTGCCGGGAAGATAGC
AGAGGCGGAGGCGCGAGAGCAGGCGAAGCGCGAGGACGCGGAGCGCTTGG
CGGAACGGGAGGCTGCTCTGGCCGCTGCGGCGAGGAAGCAGGAGGAGGAG
CGTGAGGCTGTTCGGGCTGCTGCGGCGAGGAAGCAGGAGGAGGAACGTGA
GGCTGCTCTGGCTGCTGCGGCGAGGAAGCAGGAGGAGGAGCGTGCGGCTG
TTCTGGCGGAGCGTGAGGCGTATCTCCAAGCGGCTAGGGCGAAGCAGGGG
GCGCTCCGATCGCGGTGAAGGAGCTGGAGCCCCGCCACCAGAACCCGCGA
GCAGCCCTCCACCCCCGTCGCCGTGTTATCGTCCCCCCCCCCACGCAATC
CCAGGTGCCCCTTGGTTCCCATCTTGCCGCCTCGCCGCACGAGAAGGAGC
GGGAGGTGGCGGCTTCTCCGACGATCGAGAAGGAGCGGGAGAGGACAGCG
ACTCCGGAGTTTTCGGTGACTTTGGGTCTTCCGGCCGGTGCTGAAGACGG
AGCATCGTTTGCGGCGGCAACCACGGTGTACGAGTTCCCCGTTGGAGGTA
CAGCGTTCCTGTCCCGCCCGCTGGAGATGCCTGCAACAGGTGTCACCTNT
CGCCGCACGAGAAGGAGCGGGAGGTGGCGGCTTCTCCGACGATCGAGAAG
GAGCGGGAGAGGACAGCGACTCCGGAGTTTTCGGTGACTTTGGGTCTTCC
GGCCGGTGCTGAAGACGGAGCATCGTTTGCGGCGGCAACCACGGTGTACG
AGTTCCCCGTTGGAGGTACAGCGTTCCTGTCCCGCCCGCTGGAGATGCCT
GCAACAGGTGTCACCTTCCACGATGAGGACAAATTGGCAGCTCTTCTTGC
ATGGGCTGGCATCAAACAACTTGGCCGTGCGCAATTCCCCCCACCGCACA
CCGTTGCTTTAGGGCATATCTATCGCACCCCGTACATCGCGAAACTTCCG
CCTTCTTCGCGGCAGTCCGTGTTCCAGCTTTTGTTCGCTCTCCGTCGTGC
CACCTTTCCTGAAGGTCCTCAAGGAACGTCGGTGGTGACCCAAGATTGAG
GACTCCAGCTGCCCCTTGCTCGTGCTGCCTCGACCAACGAATTTAAGCAC
GATCTGCAAGCCCCCCGGCAGGCCTCTTCACGCCCTGCGCATGGTTTTGG
AGAGGACAAGGACTTCAGTAGGTCGGCGGCTCCGGTGTCCAAGAGCTAGA
AGAACCGTTAGGGCGACCGGGATTCGACGCCCAAGAACGGGACGGACGAC
CACCACCGCCCCACCCAGTCTTCGCGAGGGCGCGGCGTCGGAGATGACAG
GCGAGGGCGAGCCGTGGGGAACCAGCCTACCGGGTCTTCGCCGGCGAGCC
GCCATCGCCGGAGCAGGAGTCGGAGCGCAGAACGTCAACAGCGCACCAAT
CCTTCGCCTAGGCATGGGCGCAGCCGGAGCGGAGACCGTCGTGGGAGAAA
CACGCCTCCGTCTAGGCGTAGCCGCAGCCGGAGCCAGAACCAGAGCGGGG
GCAATAGCAGGGCGATCAGCACTGACAGCGGTCGCGGCGGAAAAGGGCGA
CGGAGGTTAGGCCACGGTAACAGGCAAGTGATGTATAATCGAGGTGATTT
TCGTAGCTCTGGGTTGTTGGGGGAAAACAAGGATGCTTCAGAAGACGGTT
CTCTCTGTTCTGCACCGCTTGTTCTACGCCCTCCCGCTGATGTAGGCCAA
CCGACCAGGTCTTCTCTGGCTTTCAAACTGGCCAACATGCAACTTCGTGA
ACGTTCAGCCGCTGTGAAAAGCCATGCCCCTACCCATGCCGTTATGGATC
ATCCCACATCTTCCTTGCCTTTGGACGAACCTGTTGAGTCACCACGCCAT
GCTGCATCACACGCCTCGACTTCGGCCTCCCGTACTGAAATGCTGTTGGA
ACAAGTACTCACTCTCCTGCGAGCAAATCAAGTAGTGGATGCTGCTGCCG
ACGCGAATGTACAACCTCCTGTGCCCCCCCACGCTCCTAGCGTGCCACCA
CCTGCCCCATCTTCTCCCCCACCAACGCGTCCGACACCGATACAAGACCA
CGCTTCGAGCTTTTCGGGAGCTCCTGTGGCACGCGATGTTCGTGCCGACA
CCGCTGCCAGGACCACGCCAGGATCATCATCATCAGCCATGAGGTCGGCG
ACAGTACCGGTCGAGCGTGCGGTGGCACCGTCAGCGTCGACAGCCCCAGC
CCTGTTGCAACAACCTTTGGTGGTATCGCCCCCCCCCCCTCCAGCGTGCG
TCTGTTCTGATCGATCCTGACTCTGCAACCGGCCACATCGTCGAGCCACC
GAGTCAAGCGGCATCACCGGTGCCACAGGACGATGCTGGTTTGCCTTTGT
CTTCCACGGGAGCGGGAGCGAGACAGGAGGCTCTGCACGCTGCGGAGGCC
GCTGCAGCGGAGGCCGACACCATCCGCATTCAAGACAAGATGGACAAGCT
GAAGCCGGAACAACTTGATAGTGTCACACGCTTGCCCCTCGGTCCTGATC
CTGATGAATTTGCTCGCTTCGCGTCTAGCTGCAAGGGTGTGGTCACAGAG
ATCCTCAACAAAAGCGACGTCAAGCGCAAGCAGACTTTCAATTCCTCCAC
CTGGGTCACCGGATGGCTTCCGTTGTTGCGCAAACGTGTCCGTGCTGCTG
TCGTTGAAGGCCAAACCACCAACCGTGCCACTCTGGAATTTCTTGATGCC
ACCTTCCTACAGGTAGAAAACCATCTGCGCAAGGAACCGGCAGGGCCCTC
GACGTACGCCTTCTTCATCCAGAAATTGGCGGCCGCCTGGGACACTCAAG
ACAAGAGCTCGGGGATTGATCGTCTTCGCAGTTTTGGCGTATCCAACGGC
GAGACTTAAGGAGAATACATTCGTCGTTGTAAGGCTCTGGCCATGACCGT
CATGGTTTCCCACCACGCGTTCAAGCCTTCGGATGCGCAAGTGCAGATAG
CTGTTCGAGACTCCATGTTGAAGCAGTTTCCGGAAGTGTCTGGGCAGGTG
TACAAGGATGAGCAGCTCTCCATGGAAGCCCCTTTTGGGCGACATGCTTC
GTGTCTGGATGATATGTGGGATGTGTTGGACAAGCGTGCGTTCGCGCACA
CGCCGGCGGTGCATGGAGATGATTTCTTTTCGGTATCTTCCACGAATGCT
AGGAGTTCGTCTGCTGTTTCGCGTGCTGTAGCTTCTTCGGCGTTGCGTTC
GACGGTGACCCCTTCGTGGAGCCAAGGTTCTTCGGCCGCCGTGATGAGTG
TTGACCCTCTACCTAATGAT back to topCoding sequence (CDS) from alignment at Scaffold_463:38851..44220- >EsuBft999_6a-0001 ID=EsuBft999_6a-0001|Name=EsuBft999_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=909bp|location=Sequence derived from alignment at Scaffold_463:38851..44220- (Ectocarpus subulatus male Bft15b) ATGTGGAACTCCTGGGCGACAATGTGGAAATTCTGGATTACGAACCGGAG GGCGAGGCTCCCACCGCAGAGCAGTTTCCAGCGGCGGGTGCAGAAGACGA GACCCCCCCCATGCCCATGGTGTTCACCGTCGATAATTTGCTGGACAACG TCGCCACAGCAGATCCGGCGGAACTGGAGCGGCCCTACAACACCGGACGT NATCGATCGTAGCTACCCTCTCTCTGGCCCTGTTCTTGTTAACACAGAGG ACACCATGTCCAGCGGCAATGTGGAACTCCTGGGCGACAATGTGGAAATT CTGGATTACGAACCGGAGGGCGAGGCTCCCACCGCAGAGCAGTTTCCAGC GGCGGGTGCAGAAGACGAGACCCCCCCCATGCCCATGGTGTTCACCGTCG ATAATTTGCTGGACAACGTCGCCACAGCAGATCCGGCGGAACTGGAGCGG CCCTACAACACCGGACGTGTCTCTCTGGAGGATATTGTAGAAGCGGCCCA TCTGTCGTCCGATTCCCCCCTTTTCGTTCCTCTTTTCTCGCTCCCGCCGG AAGACAAATTAATCCTCTTGCCCCAGGACGAGTTTATGGCGTACCAAAGG TTGAACGAGATGTGGTGCGACGGTCTTGCCGGGAAGATAGCAGAGGCGGA GGCGCGAGAGCAGGCGAAGCGCGAGGACGCGGAGCGCTTGGCGGAACGGG AGGCTGCTCTGGCCGCTGCGGCGAGGAAGCAGGAGGAGGAGCGTGAGGCT GTTCGGGCTGCTGCGGCGAGGAAGCAGGAGGAGGAACGTGAGGCTGCTCT GGCTGCTGCGGCGAGGAAGCAGGAGGAGGAGCGTGCGGCTGTTCTGGCGG AGCGTGAGGCGTATCTCCAAGCGGCTAGGGCGAAGCAGGGGGCGCTCCGA TCGCGGTGA back to top
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