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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft995_13 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 302 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft995_13a-0001 ID=EsuBft995_13a-0001|Name=EsuBft995_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3025bp|location=Sequence derived from alignment at Scaffold_444:61390..64860+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CGCGGGCTCAAACATGAGTGCAGCTGGAGCTGGGCTAGCGGCACCTGTGT CAAAGCCGGGCAAGTGCGAACGCATACTGTGGCTAGGAAAGGTTAGGCAT GTCGTACGGCACGAGTGGAGACTACACAAGGGTAGCGGAGAGGTGTTGTT GACGACGACTCTCGTCGACAAGAAGAACCCCAACAGGTCTTCCAACAAGC GCCAGGTCTATGTTGAGAATACCGAAGAAAGTATAACCTCAAAAGCCTTA GAGATGGCTCGCATCGTTCTCAAGAACAAGCGCGAAAAGTGGGAGAAGGC TCAAGGGCATTCGGGGGGCAGCAGCAGCGGTGGTGGCCCTAGGAGGAATG CCGACAGAGAGGTAGCAGACCCCGTCATGGCGGCTTTGCGAGGAGGTGGC AGGACCCGATCCAGGGTGGTGACAATTCAGCCAGCTGAGCCGACGGCGCC GGTCGACTGGCGCCAGCAGTGTACGGAAACGTTTCTCGCGTCCATGGACA GCATGGGGTATGACAACGCGCTGAAACACTTGGAAGAAATCGTCTCGACG TTTGCGAAGGACGCCCGTAAACGCTTGCGAGAGTTGGAAGACAAGGTCAG CACAGCAGTTTCGTTGGAGCGAGCAATCGAGCAGGCACGAAAGCAACGTA GAACCAAGGAGGGAAGCCGCACGTTGCAAACGATCCTCACCGCTGCGGCC ATTCCTGGGGACGGCGTAGACGAGGTTCCATCGTTGTCGGCAGCACGTCG GGCAAAGGCGCTTGGGGTTCGCGAGCACGCCTTCAACTCCGCGGTGGAGC GTGCCAAGAATTTGTTGTCCGGTCTTCATCCAACCGAGGCGATAAAACGC GGTGTCTACTGGTTTTGGCCCCGAGCTAAGCAAAGCAATGCCGCCAGCGA AGAGCTGCTGGAGTTGATGAGGCAGTACTGGCACACGGATGAGGTGTCAC GCCAGCATGGCAACTCAGCTGAGCGCGACATGTGGAAGGCGAGTAAGTCT CCTACAGTTCACCGCCACCCTCGGCGGCAGCTCACCGAGCCGGGCGGGGG CGACGCGGTGTACGCCGAATTTCTCAACTGGGCGTCTTACAGGAGCTTCA AGGAGCGACAGAGTGACGACTTCACTGACCCTGGCCGCACGCTCTTCCTC TCGACGCGGTGCAAGTGCCTGGTCCTCCCTGCTATGGAGCAGTGCGCGTG CAAGATCCACTCGCAGCAGGTGCTATACATCGAGGCCCTGGCCAATGTCG ACATGACCAGCCACGGGGAATGCCGGTGTCGATGGTGCAAGGCAGATGGC GGCAGCAGGTGGCGGGAAACTTGGAAGCACTTGGGCATATTTTCCGATGC GATTGCCCGCCCCAAGGTCAACTTGCGGGCAGCGGACCCGGAGGGTGACG GTTGGATGGGGCGGAAACCAGAGTGCAACGCTTTGGACTGCGCGAAGTGT GGGTTCGGGGGGGATGACGGCATTCCCATCTGCAGCAACCTAGAGAACTC CAAGCAGACGGTGGTGTGGAAGATGTTCGAGAACGTGATCACTGCGTCTG CATCAGCAGATGGAAAGATCAAGGCCAAGAAGCTCGCCAACCAGGCCGTG CCGAAGGAGGGTAAGCTCTGCGATCTTTGGTCGGCGTTCAAAGAGCACAC CAAGCTGTACATGGCTCACCACTCTGTCGCCAAGTGGCAAAGGCACTGCC ACGGGCGTTGCTTGGAGACGTTTCAGGACGGTGATCTTGTCATCGAGACC GACTTTGCCGAGAAGGTGCACGTGACGGAAACATGGATCTTTGCATCTGA AGATATGGCACATGGCTGTGATTTTNCATCTGAAGACATGGCGCATGACT GCGATTTTCACCTGCACGGCTTGGCCAGGATGAAGGACTACTACCTGCGT GGAGATGGGAGCGAAGCAACAGCTGCCGCCCGGAAAGAAGGCCGGACGCC CCGGATTCACATGTTCACGGATGGATGCGGGAAGCAGTACAAGGGAAGGC GGAATTTCCGCTTCTTGGCCGACAGCGTGCGGCAAATCGGCTTCTTCATC GACCATCACTTCGCGGCCGCATCTCACTTCAAAGGTTGCCATGATGGGAT CGGCGGCGTGGCAAAGAACGCTATGAAGAGGAGGGAGAGATTTGGCAAGC GAATCGTGGGGGCGGACGGGGTGGTCAGCTTTTTGCGAAGCTTCTTTCGG GAGAGAAGGCAGGCAGCGAGGGGGAGGAGGGTATGCGGAAGTATTTCGCG AAGTGGTCTCCGTACCGCATGCGGAGGGTGCACGTCGAGTTTATCGTCAA GGAGATATATCGGCCAAACTCGGTCCTGGCAGGCATAGAGGGTATACGAG ACATGCACCACTTCGCGGGAGCAAACACTCCCAAGTGGGATGGGTCCACC ACGACCGAGGGACTCGAAAATGACTGCAAGCTGGTACCTAAGCGCGAGGG GCGGGGTAGCTTGTCGAGTCAAGAGAAGAGCAAGTTGGTGGAAGTCAAGG TTTTGGGTGCAGTAGCGAGCAGATGGAAGGGCAAGGGGGCTGGGTTACAG GATCCGGTGTCGGGGGAGGAAGACGTGACTTGCAGAAAGGTGAAACGGAC ATACAGGCTCAGGACTCGGTTGGCGTCGTGCTTGTGCCCGGCGTGCCAGC GTTGCGAGTATGAGCAGTGCTACGTTAGCAAGACGTACCCACTTCTCTTT CCGGCAATGCAGGAGGGCGAAGTGAAGGAAACGGTGATCATGGACACTGG AGTAGCGCCCGTAGACGAAGATAACTCCCGGGGGATCCAGTTCGGGAGTA GGAAGAAGGAATGCAAGATGAAGAGAATTACTGGGACACAACGGCAGGAT TGCGAATCTGCTGCTGCGTCAAAGATTTGGGAAGAGCTTGGTAGAAAGGA AGAGCCCAATATTTTTGCCCGTTTCGGGAGGTGGGCTGGTTTTTAAGAGA TGTGCTTCTTGTATTTGCTTGTGGAGCAGTAGGTGGGCTTCAAAGCCCAT TTGAGGTACAACTTGGGGGTGTGAG back to topprotein sequence of EsuBft995_13a-0001 >EsuBft995_13 ID=EsuBft995_13|Name=EsuBft995_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=774bp
MSAAGAGLAAPVSKPGKCERILWLGKVRHVVRHEWRLHKGSGEVLLTTTL VDKKNPNRSSNKRQVYVENTEESITSKALEMARIVLKNKREKWEKAQGHS GGSSSGGGPRRNADREVADPVMAALRGGGRTRSRVVTIQPAEPTAPVDWR QQCTETFLASMDSMGYDNALKHLEEIVSTFAKDARKRLRELEDKVSTAVS LERAIEQARKQRRTKEGSRTLQTILTAAAIPGDGVDEVPSLSAARRAKAL GVREHAFNSAVERAKNLLSGLHPTEAIKRGVYWFWPRAKQSNAASEELLE LMRQYWHTDEVSRQHGNSAERDMWKASKSPTVHRHPRRQLTEPGGGDAVY AEFLNWASYRSFKERQSDDFTDPGRTLFLSTRCKCLVLPAMEQCACKIHS QQVLYIEALANVDMTSHGECRCRWCKADGGSRWRETWKHLGIFSDAIARP KVNLRAADPEGDGWMGRKPECNALDCAKCGFGGDDGIPICSNLENSKQTV VWKMFENVITASASADGKIKAKKLANQAVPKEGKLCDLWSAFKEHTKLYM AHHSVAKWQRHCHGRCLETFQDGDLVIETDFAEKVHVTETWIFASEDMAH GCDFXSEDMAHDCDFHLHGLARMKDYYLRGDGSEATAAARKEGRTPRIHM FTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAAASHFKGCHDGIGGVA KNAMKRRERFGKRIVGADGVVSFLRSFFRERRQAARGRRVCGSISRSGLR TACGGCTSSLSSRRYIGQTRSWQA back to topmRNA from alignment at Scaffold_444:61390..64860+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft995_13a-0001 ID=EsuBft995_13a-0001|Name=EsuBft995_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3471bp|location=Sequence derived from alignment at Scaffold_444:61390..64860+ (Ectocarpus subulatus male Bft15b) CGCGGGCTCAAACATGAGTGCAGCTGGAGCTGGGCTAGCGGCACCTGTGT
CAAAGCCGGGCAAGTGCGAACGCATACTGTGGCTAGGAAAGGTTAGGCAT
GTCGTACGGCACGAGTGGAGACTACACAAGGGTAGCGGAGAGGTGTTGTT
GACGACGACTCTCGTCGACAAGAAGAACCCCAACAGGTCTTCCAACAAGC
GCCAGGTCTATGTTGAGAATACCGAAGAAAGTATAACCTCAAAAGCCTTA
GAGATGGCTCGCATCGTTCTCAAGAACAAGCGCGAAAAGTGGGAGAAGGC
TCAAGGGCATTCGGGGGGCAGCAGCAGCGGTGGTGGCCCTAGGAGGAATG
CCGACAGAGAGGTAGCAGACCCCGTCATGGCGGCTTTGCGAGGAGGTGGC
AGGACCCGATCCAGGGTGGTGACAATTCAGCCAGCTGAGCCGGTGAGATG
CTAATGTCGCTAGAGGTTTCAGTCAATCAACAGCACAGCAGATAAGTTTG
TCGAGGCCCACTTACAATGCACCCATCAGTCAACACATGCGGTAATTTCG
CCGAGACACGAATAATTGCGCCGAGGGGGTTTTAATTCCACCGAGAGGAT
CGAGTTGCATGAAACGTCGCGTAGTTGTACAGCGAGAGCTCGTCTGTGCC
AGCTCCAACGGAAACTAAGCGCCCATTTTTGTGTGTGCAAATGGTCTCTC
CATCAGTCGTGCCTTGCGCTGAAGTATTATTGCGTTGCGCAACGTCGTAC
CCCCCGCCTCCTCGTTCGTCATGTGTGCACACAGACGGCGCCGGTCGACT
GGCGCCAGCAGTGTACGGAAACGTTTCTCGCGTCCATGGACAGCATGGGG
TATGACAACGCGCTGAAACACTTGGAAGAAATCGTCTCGACGTTTGCGAA
GGACGCCCGTAAACGCTTGCGAGAGTTGGAAGACAAGGTCAGCACAGCAG
TTTCGTTGGAGCGAGCAATCGAGCAGGCACGAAAGCAACGTAGAACCAAG
GAGGGAAGCCGCACGTTGCAAACGATCCTCACCGCTGCGGCCATTCCTGG
GGACGGCGTAGACGAGGTTCCATCGTTGTCGGCAGCACGTCGGGCAAAGG
CGCTTGGGGTTCGCGAGCACGCCTTCAACTCCGCGGTGGAGCGTGCCAAG
AATTTGTTGTCCGGTCTTCATCCAACCGAGGCGATAAAACGCGGTGTCTA
CTGGTTTTGGCCCCGAGCTAAGCAAAGCAATGCCGCCAGCGAAGAGCTGC
TGGAGTTGATGAGGCAGTACTGGCACACGGATGAGGTGTCACGCCAGCAT
GGCAACTCAGCTGAGCGCGACATGTGGAAGGCGAGTAAGTCTCCTACAGT
TCACCGCCACCCTCGGCGGCAGCTCACCGAGCCGGGCGGGGGCGACGCGG
TGTACGCCGAATTTCTCAACTGGGCGTCTTACAGGAGCTTCAAGGAGCGA
CAGAGTGACGACTTCACTGACCCTGGCCGCACGCTCTTCCTCTCGACGCG
GTGCAAGTGCCTGGTCCTCCCTGCTATGGAGCAGTGCGCGTGCAAGATCC
ACTCGCAGCAGGTGCTATACATCGAGGCCCTGGCCAATGTCGACATGACC
AGCCACGGGGAATGCCGGTGTCGATGGTGCAAGGCAGATGGCGGCAGCAG
GTGGCGGGAAACTTGGAAGCACTTGGGCATATTTTCCGATGCGATTGCCC
GCCCCAAGGTCAACTTGCGGGCAGCGGACCCGGAGGGTGACGGTTGGATG
GGGCGGAAACCAGAGTGCAACGCTTTGGACTGCGCGAAGTGTGGGTTCGG
GGGGGATGACGGCATTCCCATCTGCAGCAACCTAGAGAACTCCAAGCAGA
CGGTGGTGTGGAAGATGTTCGAGAACGTGATCACTGCGTCTGCATCAGCA
GATGGAAAGATCAAGGCCAAGAAGCTCGCCAACCAGGCCGTGCCGAAGGA
GGGTAAGCTCTGCGATCTTTGGTCGGCGTTCAAAGAGCACACCAAGCTGT
ACATGGCTCACCACTCTGTCGCCAAGTGGCAAAGGCACTGCCACGGGCGT
TGCTTGGAGACGTTTCAGGACGGTGATCTTGTCATCGAGACCGACTTTGC
CGAGAAGTACATCCACCAATCCTTCATCAGCATGATGATGCCGGTTTACC
CGCAGACAACGCTCATGGTGGCCATCGTCCAATTCAACCCGCACACGTGG
GGGGTGGCAGGGTGCACGTGACGGAAACATGGATCTTTGCATCTGAAGAT
ATGGCACATGGCTGTGATTTTNCATCTGAAGACATGGCGCATGACTGCGA
TTTTCACCTGCACGGCTTGGCCAGGATGAAGGACTACTACCTGCGTGGAG
ATGGGAGCGAAGCAACAGCTGCCGCCCGGAAAGAAGGCCGGACGCCCCGG
ATTCACATGTTCACGGATGGATGCGGGAAGCAGTACAAGGGAAGGCGGAA
TTTCCGCTTCTTGGCCGACAGCGTGCGGCAAATCGGCTTCTTCATCGACC
ATCACTTCGCGGCCGCATCTCACTTCAAAGGTTGCCATGATGGGATCGGC
GGCGTGGCAAAGAACGCTATGAAGAGGAGGGAGAGATTTGGCAAGCGAAT
CGTGGGGGCGGACGGGGTGGTCAGCTTTTTGCGAAGCTTCTTTCGGGAGA
GAAGGCAGGCAGCGAGGGGGAGGAGGGTATGCGGAAGTATTTCGCGAAGT
GGTCTCCGTACCGCATGCGGAGGGTGCACGTCGAGTTTATCGTCAAGGAG
ATATATCGGCCAAACTCGGTCCTGGCAGGCATAGAGGGTATACGAGACAT
GCACCACTTCGCGGGAGCAAACACTCCCAAGTGGGATGGGTCCACCACGA
CCGAGGGACTCGAAAATGACTGCAAGCTGGTACCTAAGCGCGAGGGGCGG
GGTAGCTTGTCGAGTCAAGAGAAGAGCAAGTTGGTGGAAGTCAAGGTTTT
GGGTGCAGTAGCGAGCAGATGGAAGGGCAAGGGGGCTGGGTTACAGGATC
CGGTGTCGGGGGAGGAAGACGTGACTTGCAGAAAGGTGAAACGGACATAC
AGGCTCAGGACTCGGTTGGCGTCGTGCTTGTGCCCGGCGTGCCAGCGTTG
CGAGTATGAGCAGTGCTACGTTAGCAAGACGTACCCACTTCTCTTTCCGG
CAATGCAGGAGGGCGAAGTGAAGGAAACGGTGATCATGGACACTGGAGTA
GCGCCCGTAGACGAAGATAACTCCCGGGGGATCCAGTTCGGGAGTAGGAA
GAAGGAATGCAAGATGAAGAGAATTACTGGGACACAACGGCAGGATTGCG
AATCTGCTGCTGCGTCAAAGATTTGGGAAGAGCTTGGTAGAAAGGAAGAG
CCCAATATTTTTGCCCGTTTCGGGAGGTGGGCTGGTTTTTAAGAGATGTG
CTTCTTGTATTTGCTTGTGGAGCAGTAGGTGGGCTTCAAAGCCCATTTGA
GGTACAACTTGGGGGTGTGAG back to topCoding sequence (CDS) from alignment at Scaffold_444:61390..64860+ >EsuBft995_13a-0001 ID=EsuBft995_13a-0001|Name=EsuBft995_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2325bp|location=Sequence derived from alignment at Scaffold_444:61390..64860+ (Ectocarpus subulatus male Bft15b) ATGAGTGCAGCTGGAGCTGGGCTAGCGGCACCTGTGTCAAAGCCGGGCAA GTGCGAACGCATACTGTGGCTAGGAAAGGTTAGGCATGTCGTACGGCACG AGTGGAGACTACACAAGGGTAGCGGAGAGGTGTTGTTGACGACGACTCTC GTCGACAAGAAGAACCCCAACAGGTCTTCCAACAAGCGCCAGGTCTATGT TGAGAATACCGAAGAAAGTATAACCTCAAAAGCCTTAGAGATGGCTCGCA TCGTTCTCAAGAACAAGCGCGAAAAGTGGGAGAAGGCTCAAGGGCATTCG GGGGGCAGCAGCAGCGGTGGTGGCCCTAGGAGGAATGCCGACAGAGAGGT AGCAGACCCCGTCATGGCGGCTTTGCGAGGAGGTGGCAGGACCCGATCCA GGGTGGTGACAATTCAGCCAGCTGAGCCGACGGCGCCGGTCGACTGGCGC CAGCAGTGTACGGAAACGTTTCTCGCGTCCATGGACAGCATGGGGTATGA CAACGCGCTGAAACACTTGGAAGAAATCGTCTCGACGTTTGCGAAGGACG CCCGTAAACGCTTGCGAGAGTTGGAAGACAAGGTCAGCACAGCAGTTTCG TTGGAGCGAGCAATCGAGCAGGCACGAAAGCAACGTAGAACCAAGGAGGG AAGCCGCACGTTGCAAACGATCCTCACCGCTGCGGCCATTCCTGGGGACG GCGTAGACGAGGTTCCATCGTTGTCGGCAGCACGTCGGGCAAAGGCGCTT GGGGTTCGCGAGCACGCCTTCAACTCCGCGGTGGAGCGTGCCAAGAATTT GTTGTCCGGTCTTCATCCAACCGAGGCGATAAAACGCGGTGTCTACTGGT TTTGGCCCCGAGCTAAGCAAAGCAATGCCGCCAGCGAAGAGCTGCTGGAG TTGATGAGGCAGTACTGGCACACGGATGAGGTGTCACGCCAGCATGGCAA CTCAGCTGAGCGCGACATGTGGAAGGCGAGTAAGTCTCCTACAGTTCACC GCCACCCTCGGCGGCAGCTCACCGAGCCGGGCGGGGGCGACGCGGTGTAC GCCGAATTTCTCAACTGGGCGTCTTACAGGAGCTTCAAGGAGCGACAGAG TGACGACTTCACTGACCCTGGCCGCACGCTCTTCCTCTCGACGCGGTGCA AGTGCCTGGTCCTCCCTGCTATGGAGCAGTGCGCGTGCAAGATCCACTCG CAGCAGGTGCTATACATCGAGGCCCTGGCCAATGTCGACATGACCAGCCA CGGGGAATGCCGGTGTCGATGGTGCAAGGCAGATGGCGGCAGCAGGTGGC GGGAAACTTGGAAGCACTTGGGCATATTTTCCGATGCGATTGCCCGCCCC AAGGTCAACTTGCGGGCAGCGGACCCGGAGGGTGACGGTTGGATGGGGCG GAAACCAGAGTGCAACGCTTTGGACTGCGCGAAGTGTGGGTTCGGGGGGG ATGACGGCATTCCCATCTGCAGCAACCTAGAGAACTCCAAGCAGACGGTG GTGTGGAAGATGTTCGAGAACGTGATCACTGCGTCTGCATCAGCAGATGG AAAGATCAAGGCCAAGAAGCTCGCCAACCAGGCCGTGCCGAAGGAGGGTA AGCTCTGCGATCTTTGGTCGGCGTTCAAAGAGCACACCAAGCTGTACATG GCTCACCACTCTGTCGCCAAGTGGCAAAGGCACTGCCACGGGCGTTGCTT GGAGACGTTTCAGGACGGTGATCTTGTCATCGAGACCGACTTTGCCGAGA AGGTGCACGTGACGGAAACATGGATCTTTGCATCTGAAGATATGGCACAT GGCTGTGATTTTNCATCTGAAGACATGGCGCATGACTGCGATTTTCACCT GCACGGCTTGGCCAGGATGAAGGACTACTACCTGCGTGGAGATGGGAGCG AAGCAACAGCTGCCGCCCGGAAAGAAGGCCGGACGCCCCGGATTCACATG TTCACGGATGGATGCGGGAAGCAGTACAAGGGAAGGCGGAATTTCCGCTT CTTGGCCGACAGCGTGCGGCAAATCGGCTTCTTCATCGACCATCACTTCG CGGCCGCATCTCACTTCAAAGGTTGCCATGATGGGATCGGCGGCGTGGCA AAGAACGCTATGAAGAGGAGGGAGAGATTTGGCAAGCGAATCGTGGGGGC GGACGGGGTGGTCAGCTTTTTGCGAAGCTTCTTTCGGGAGAGAAGGCAGG CAGCGAGGGGGAGGAGGGTATGCGGAAGTATTTCGCGAAGTGGTCTCCGT ACCGCATGCGGAGGGTGCACGTCGAGTTTATCGTCAAGGAGATATATCGG CCAAACTCGGTCCTGGCAGGCATAG back to top
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