Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G0Q3 |
| ProteomeId | EsuBft993_7 |
| Protein domains | IPR006600 |
| Protein domains | IPR009057 |
| Protein domains | IPR007087 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 128 |
| Hectar predicted targeting category | other localisation |
| Evalue | 7.32e-202 |
| EggNOG OGs | 2DCSR@1|root,2S5KN@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003677 |
| GO | 0046872 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft993_7a-0001 ID=EsuBft993_7a-0001|Name=EsuBft993_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1284bp|location=Sequence derived from alignment at Scaffold_589:28319..30118+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGTTGAAAGGACGGGGTCTGATTCTTGACCGTCACTTCGAGACGAT
AAAAACAACACATGTGAAGGCGGGACACTCCGTTGCGAAGGAGCGGTGGG
ACGCCATCAAGAGCGCGTGGATTGATGGTGAAATCCAGGGCATTACCAGC
AGCACCCGCCTGTCCTTGTCGTCCCAACAAGATGCCAGCAGCGCACGAGG
TACTGCTGCACCTTCTCAGCACCCACCAGCTGCTGCAGCGGGTACCGCGA
GGAGGAAGGTGGATCGAGGGAAGCACGCCAGGGAGAGAGCTGCGAAAGGC
ACTTTAGGCGGCAACATTTGCAACGCGTTCTCGATTGGCAGCGGACAACC
GATTGAGCGGACTCGTGGTGGAGTGAAAGAGTTCGTATCCGGTATCACCT
TCCCGCCTCCGGCCCCGGATTCCCGCCGATCCTGCCCTCACTGTACCATG
ACCTTCGTGAACGAGCAAGGCCTTGGGATCCACGTGAGAACGCAGCACAG
CAGTGCAAACATGTCCAACGGCGTGCGGCTGCGGCGGATGCTTCGGAAGA
ATCTCGAAGGGCGTGTCCTGCCGTGGGAAGAAGCCGGGCCTGGGCGTTGT
TGGCACGTGAAGGTCGATGATGCGACGGGGGCGGCTTCGTTTGTCCTCCA
GCGGAAGCGCTTTCTCGATCTAGACTTGGAAAGCGACGGCTTTATGGACC
GCGAAAACAAGGAAAGTCCCAATGCTGTCAACCAGCTGCGCATCCTCGAG
GATAACGCCGCGGACCTCTGCAAGGAGGAGGAGCGCACACCTCTTCAGTT
CTTAGAGGATCGTCTCAAGGTTCACCACAGCAACATCGTGAAGTGGGCCA
AGGACGAGAAGGCCATAGTCGCGGCGGCAGCAGACGACGTGAAGAAGAGC
CTCCTCGCCAGGCAGCAGCCTAAGCGGTGGTTTCCTGAGGCAGAAAAGAG
GCTTTACAAGATATTCGTGGAGCGGCGTAAGAGGAAGCTGAAGGTATCGA
CCCTATGGCTGACGATCACGTTCCGGGAGCTCGTGCGAGAGATGTTTCCC
GGGGACCAACGGGCGGCGGCGTTCCGCGCATCCTTCAGGTGGGCACGAAA
ATGGGCCAAGAGGCACAACCTGTCCAAAAGACGTCGGACCAACGTCAAGA
ACAAGTCTATTAAGGAACGCCTACCAAAGATCCAGCGCTTCCACCGACTG
TTTCGCAAGCTCCTGCAAGAGCCGGTACGGTACAGGGCGCCCGATGAGTC
GGACGTATCGGCGATTACGACGGTCGCAGANNNN back to topprotein sequence of EsuBft993_7a-0001 >EsuBft993_7 ID=EsuBft993_7|Name=EsuBft993_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=428bp
MELKGRGLILDRHFETIKTTHVKAGHSVAKERWDAIKSAWIDGEIQGITS
STRLSLSSQQDASSARGTAAPSQHPPAAAAGTARRKVDRGKHARERAAKG
TLGGNICNAFSIGSGQPIERTRGGVKEFVSGITFPPPAPDSRRSCPHCTM
TFVNEQGLGIHVRTQHSSANMSNGVRLRRMLRKNLEGRVLPWEEAGPGRC
WHVKVDDATGAASFVLQRKRFLDLDLESDGFMDRENKESPNAVNQLRILE
DNAADLCKEEERTPLQFLEDRLKVHHSNIVKWAKDEKAIVAAAADDVKKS
LLARQQPKRWFPEAEKRLYKIFVERRKRKLKVSTLWLTITFRELVREMFP
GDQRAAAFRASFRWARKWAKRHNLSKRRRTNVKNKSIKERLPKIQRFHRL
FRKLLQEPVRYRAPDESDVSAITTVAXX back to topmRNA from alignment at Scaffold_589:28319..30118+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft993_7a-0001 ID=EsuBft993_7a-0001|Name=EsuBft993_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1800bp|location=Sequence derived from alignment at Scaffold_589:28319..30118+ (Ectocarpus subulatus male Bft15b)
ATGGGTTGTTGAAAGATCTTGGCAAACTTGCAGAGTTGAAAGGACGGGGT
CTGATTCTTGACCTGCAGAGTTGAAAGGACGGGGTCTGATTCTTGACCGT
CACTTCGAGACGATAAAAACAACACATGTGAAGGCGGGACACTCCGTTGC
GAAGGAGCGGTGGGACGCCATCAAGAGCGCGTGGGTTGAAGCAGAACGGT
ATCTTCGACGAAGGAGAGTGGATCGCGCAGATTGATGGTGAAATCCAGGG
CATTACCAGCAGCACCCGCCTGTCCTTGTCGTCCCAACAAGATGCCAGCA
GCGCACGAGGTACTGCTGCACCTTCTCAGCACCCACCAGCTGCTGCAGCG
GGTACCGCGAGGAGGAAGGTGGATCGAGGGAAGCACGCCAGGGAGAGAGC
TGCGAAAGGCACTTTAGGCGGCAACATTTGCAACGCGTTCTCGATTGGCA
GCGGACAACCGGTGAGTTCGGTTACATATGTATCCGACGCACGCTGTTGC
TTTGTTTTGCTACACAGGTGTTTTTTGTTTTTTTATTTCCCGATAGTCTA
AGCAAGAGAAAAAATGAAAAAAAAAATAGGTGAGTTTATTAGTCTAATGT
GACCCAAACGAAACAGACGTCATCTCCCCACTCTCTCGTGTGATTCACGA
TAATCTTTTCAAGGAAGTATTCGTTCAGAGTGCATACTTCTATAGTAGAT
ACTTTTGCCAGCGGCATCCACGGAAGTTTGAATTCAACAGCGCCACAACT
AAGAGCGACTGACACGTCACATGGCTCGTTGAATCCCCTACACGGCAATT
ACACCCTTTCCCATGGCACCGAGCAGATTGAGCGGACTCGTGGTGGAGTG
AAAGAGTTCGTATCCGGTATCACCTTCCCGCCTCCGGCCCCGGATTCCCG
CCGATCCTGCCCTCACTGTACCATGACCTTCGTGAACGAGCAAGGCCTTG
GGATCCACGTGAGAACGCAGCACAGCAGTGCAAACATGTCCAACGGCGTG
CGGCTGCGGCGGATGCTTCGGAAGAATCTCGAAGGGCGTGTCCTGCCGTG
GGAAGAAGCCGGGCCTGGGCGTTGTTGGCACGTGAAGGTCGATGATGCGA
CGGGGGCGGCTTCGTTTGTCCTCCAGCGGAAGCGCTTTCTCGATCTAGAC
TTGGAAAGCGACGGCTTTATGGACCGCGAAAACAAGGAAAGTCGTGGAGA
TCCCAAGCGCAAGCGATAAGACTATGGGTTAAAGCCAATGCTGTCAACCA
GCTGCGCATCCTCGAGGATAACGCCGCGGACCTCTGCAAGGAGGAGGAGC
GCACACCTCTTCAGTTCTTAGAGGATCGTCTCAAGGTTCACCACAGCAAC
ATCGTGAAGTGGGCCAAGGACGAGAAGGCCATAGTCGCGGCGGCAGCAGA
CGACGTGAAGAAGAGCCTCCTCGCCAGGCAGCAGCCTAAGCGGTGGTTTC
CTGAGGCAGAAAAGAGGCTTTACAAGATATTCGTGGAGCGGCGTAAGAGG
AAGCTGAAGGTATCGACCCTATGGCTGACGATCACGTTCCGGGAGCTCGT
GCGAGAGATGTTTCCCGGGGACCAACGGGCGGCGGCGTTCCGCGCATCCT
TCAGGTGGGCACGAAAATGGGCCAAGAGGCACAACCTGTCCAAAAGACGT
CGGACCAACGTCAAGAACAAGTCTATTAAGGAACGCCTACCAAAGATCCA
GCGCTTCCACCGACTGTTTCGCAAGCTCCTGCAAGAGCCGGTACGGTACA
GGGCGCCCGATGAGTCGGACGTATCGGCGATTACGACGGTCGCAGANNNN
back to topCoding sequence (CDS) from alignment at Scaffold_589:28319..30118+ >EsuBft993_7a-0001 ID=EsuBft993_7a-0001|Name=EsuBft993_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1284bp|location=Sequence derived from alignment at Scaffold_589:28319..30118+ (Ectocarpus subulatus male Bft15b)
ATGGAGTTGAAAGGACGGGGTCTGATTCTTGACCGTCACTTCGAGACGAT
AAAAACAACACATGTGAAGGCGGGACACTCCGTTGCGAAGGAGCGGTGGG
ACGCCATCAAGAGCGCGTGGATTGATGGTGAAATCCAGGGCATTACCAGC
AGCACCCGCCTGTCCTTGTCGTCCCAACAAGATGCCAGCAGCGCACGAGG
TACTGCTGCACCTTCTCAGCACCCACCAGCTGCTGCAGCGGGTACCGCGA
GGAGGAAGGTGGATCGAGGGAAGCACGCCAGGGAGAGAGCTGCGAAAGGC
ACTTTAGGCGGCAACATTTGCAACGCGTTCTCGATTGGCAGCGGACAACC
GATTGAGCGGACTCGTGGTGGAGTGAAAGAGTTCGTATCCGGTATCACCT
TCCCGCCTCCGGCCCCGGATTCCCGCCGATCCTGCCCTCACTGTACCATG
ACCTTCGTGAACGAGCAAGGCCTTGGGATCCACGTGAGAACGCAGCACAG
CAGTGCAAACATGTCCAACGGCGTGCGGCTGCGGCGGATGCTTCGGAAGA
ATCTCGAAGGGCGTGTCCTGCCGTGGGAAGAAGCCGGGCCTGGGCGTTGT
TGGCACGTGAAGGTCGATGATGCGACGGGGGCGGCTTCGTTTGTCCTCCA
GCGGAAGCGCTTTCTCGATCTAGACTTGGAAAGCGACGGCTTTATGGACC
GCGAAAACAAGGAAAGTCCCAATGCTGTCAACCAGCTGCGCATCCTCGAG
GATAACGCCGCGGACCTCTGCAAGGAGGAGGAGCGCACACCTCTTCAGTT
CTTAGAGGATCGTCTCAAGGTTCACCACAGCAACATCGTGAAGTGGGCCA
AGGACGAGAAGGCCATAGTCGCGGCGGCAGCAGACGACGTGAAGAAGAGC
CTCCTCGCCAGGCAGCAGCCTAAGCGGTGGTTTCCTGAGGCAGAAAAGAG
GCTTTACAAGATATTCGTGGAGCGGCGTAAGAGGAAGCTGAAGGTATCGA
CCCTATGGCTGACGATCACGTTCCGGGAGCTCGTGCGAGAGATGTTTCCC
GGGGACCAACGGGCGGCGGCGTTCCGCGCATCCTTCAGGTGGGCACGAAA
ATGGGCCAAGAGGCACAACCTGTCCAAAAGACGTCGGACCAACGTCAAGA
ACAAGTCTATTAAGGAACGCCTACCAAAGATCCAGCGCTTCCACCGACTG
TTTCGCAAGCTCCTGCAAGAGCCGGTACGGTACAGGGCGCCCGATGAGTC
GGACGTATCGGCGATTACGACGGTCGCAGANNNN back to top
|