Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft993_6 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 96 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft993_6a-0001 ID=EsuBft993_6a-0001|Name=EsuBft993_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=960bp|location=Sequence derived from alignment at Scaffold_589:47037..47996+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGATGGCGTGGCCTACCGCATGTCTCTCACTCTCTAAGCAACAAGG
TCTTAAGTCAACCTTCTTCCTCTTTCGGCCTCTGACGAGCTACCGCACCC
AAACACAATATATTGTAAGGCCTGGTGTTGGTAGTGGGTATTGGCGTCTG
AGCGGTGGGAGCTGGGCCATCGGGGCAGCGGACACCATTTTCATAGCTGG
GATCGCGACCAAAGGGGGCGAGGACAGCAGTGCATAGCTGGTGCGGTGGC
CATTGCGGGGACCGGGACAGCAGGGTTTATAGCTGGGACAGCACTTCGAG
GCTGGGACAGCAGGGAGGGTTTAGAGTTTTAGTTTGATATGCCTGGAACG
GAGGAGGACGCAACTCTGAGCGCGAGTTGGATGAGGCGCTACGAGCTATA
GATGTTGCCAAGGCTGAGACGAAGGAGGCCAAGGCTCAGACGAAGGAGGC
CAAAGCTGAGACGGAGGAGCTTAGGGCAGCACAGCGGCGGTCTGCGGGTG
CACCTGCCGGCAGCAGCTCAGGAGGCGACGGTCTAGTTGCTCCTGGAGGG
GCTTCATCTGCACCGGTGAGGCCAATGTGGCCAGGCGGGGTGAGTCATGA
TGGCGGTACTGGGGTGCCGGGCTTGCCTCTGGGAGGTACAATTGTCAGAA
CTCCTGTGCCTAGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNN back to topprotein sequence of EsuBft993_6a-0001 >EsuBft993_6 ID=EsuBft993_6|Name=EsuBft993_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=78bp
MAMAWPTACLSLSKQQGLKSTFFLFRPLTSYRTQTQYIVRPGVGSGYWRL
SGGSWAIGAADTIFIAGIATKGGEDSSA back to topmRNA from alignment at Scaffold_589:47037..47996+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft993_6a-0001 ID=EsuBft993_6a-0001|Name=EsuBft993_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=960bp|location=Sequence derived from alignment at Scaffold_589:47037..47996+ (Ectocarpus subulatus male Bft15b)
ATGGCGATGGCGTGGCCTACCGCATGTCTCTCACTCTCTAAGCAACAAGG
TCTTAAGTCAACCTTCTTCCTCTTTCGGCCTCTGACGAGCTACCGCACCC
AAACACAATATATTGTAAGGCCTGGTGTTGGTAGTGGGTATTGGCGTCTG
AGCGGTGGGAGCTGGGCCATCGGGGCAGCGGACACCATTTTCATAGCTGG
GATCGCGACCAAAGGGGGCGAGGACAGCAGTGCATAGCTGGTGCGGTGGC
CATTGCGGGGACCGGGACAGCAGGGTTTATAGCTGGGACAGCACTTCGAG
GCTGGGACAGCAGGGAGGGTTTAGAGTTTTAGTTTGATATGCCTGGAACG
GAGGAGGACGCAACTCTGAGCGCGAGTTGGATGAGGCGCTACGAGCTATA
GATGTTGCCAAGGCTGAGACGAAGGAGGCCAAGGCTCAGACGAAGGAGGC
CAAAGCTGAGACGGAGGAGCTTAGGGCAGCACAGCGGCGGTCTGCGGGTG
CACCTGCCGGCAGCAGCTCAGGAGGCGACGGTCTAGTTGCTCCTGGAGGG
GCTTCATCTGCACCGGTGAGGCCAATGTGGCCAGGCGGGGTGAGTCATGA
TGGCGGTACTGGGGTGCCGGGCTTGCCTCTGGGAGGTACAATTGTCAGAA
CTCCTGTGCCTAGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNN back to topCoding sequence (CDS) from alignment at Scaffold_589:47037..47996+ >EsuBft993_6a-0001 ID=EsuBft993_6a-0001|Name=EsuBft993_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=237bp|location=Sequence derived from alignment at Scaffold_589:47037..47996+ (Ectocarpus subulatus male Bft15b)
ATGGCGATGGCGTGGCCTACCGCATGTCTCTCACTCTCTAAGCAACAAGG
TCTTAAGTCAACCTTCTTCCTCTTTCGGCCTCTGACGAGCTACCGCACCC
AAACACAATATATTGTAAGGCCTGGTGTTGGTAGTGGGTATTGGCGTCTG
AGCGGTGGGAGCTGGGCCATCGGGGCAGCGGACACCATTTTCATAGCTGG
GATCGCGACCAAAGGGGGCGAGGACAGCAGTGCATAG back to top
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