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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 44056.XP_009040048.1 |
| ProteomeId | EsuBft98_15 |
| Protein domains | IPR018797 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 207 |
| Hectar predicted targeting category | other localisation |
| Evalue | 0.000149 |
| EggNOG OGs | KOG3973@1|root,KOG3973@2759|Eukaryota |
| Ec32 ortholog description | Uncharacterised protein family FAM98 |
| Ec32 ortholog | Ec-14_003140.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Preferred name | FAM98A |
| KEGG ko | ko:K04703,ko:K15434,ko:K17554 |
| GOs | GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0008284,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0016740,GO:0016741,GO:0019222,GO:0019538,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032259,GO:0032418,GO:0032991,GO:0036211,GO:0042127,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051179,GO:0051640,GO:0051641,GO:0060255,GO:0060491,GO:0065007,GO:0070013,GO:0071704,GO:0072669,GO:0097159,GO:0120032,GO:0120034,GO:0120035,GO:0140096,GO:1900027,GO:1900029,GO:1901363,GO:1901564 |
| Description | positive regulation of ruffle assembly |
| COG category | S |
| BRITE | ko00000,ko01009,ko03016 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft98_15a-0001 ID=EsuBft98_15a-0001|Name=EsuBft98_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2070bp|location=Sequence derived from alignment at Scaffold_510:135775..141139+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GAACATACAGGAGGCAGGTCTCGTCCACCCCTGCGTCTCTCGCGTGTCAT GGACGTCGCTCTGGAAGATAATAGTTTTCTCCTGTCCGACCTTGATCTTA GTGTGGTCGGGCATCAGGATGGCGAGGACAACTTTCAAAAATCCTCCGTC GTGATAACAGAGCAAGTACGGGCTCTCGAGGCAGCTTTAGCTCGGCACCA GGATGGCCGTCCGGAAGAAGCGGATGATACTGGGGGCGGAGCGGGGATCG TGAATGTTGCGATAGCACGCGGAATGCCGAGACCAGACGGGAACACCGAT GATTCAACCTCGAGGGCTGAGGCACTGAACTTCATGCGCTCCGAACTTCA GCTCCTGTGCATAGAAGCGCATCGGAGACGTAAAGAGAGCAAGCCCCTGC TCGACGGACTGGAACTGACGGCCGCACAGAGGCAAACGATGGACAGAGTT CACGCGGCCATCGCCGCGGACTTCGCCCTGCGACGGCTCATGCTGCTTAG GCGCTGTGACGTGACCGTGCGGTCCTTCCTGCGTGACAGCATCAGCGGCG GCAGCGGTGTCGGAGAAAGAAAGCAGGATGGAGGGAGCGCAGGGGGCAAG GGGGAACAAGGAGAGGCACGAGGAGCTGCGGATAGTAGTGGTGGTGGCGA CGACGAGAAGTTTGCCGACCTTCCGCCCGCCTTGAGAACAAGGCGACAAG CGCTCTTGGACAAGCCTCGGGAAATCACGATAGATGACGCGCTGATCGCC CCGACTTCGGTGGCTCGGCAGCATACCCACAAGACGACAGCAGAAACAAC GAAGGCTGCCTTACCAACCGCCGACATCGGCGAGGTTTCTGATCGTGGCG GGCGCGTGAGCGATGCCCGCGGCGAGGCGGTCTGGAAGACCCGTAAGGAA TTCGACAAAGCCGCCGCTGCTGCTGCTCTCTCAGGGAAAAAGGGTGACAG TCGTGGCGGCGGGCGCGGCAGCGGTGGCAAGCGAGGCGAGAAAAAAGGAG GCGGCGGCGGGGGAAGAGGTGCGGGCGAGGAGCAAGGGAAAAAGGAGCGT CGGAACCGTCGTGGCGGCGGCGGGGGGGGCGGGGGAGGGGGGGGGGGGGG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNGGGGAGGGGGGGGAGGAGGGAGAGGTGGTGGTGAA GGGCGGGGTGGAGGGAACAAGAGGAAGTGGGGAGGGCGTGGAGACCAGGC ACCGGATCAGCGCAGATAAACCAGTTGCGGTGTCCTTGGAGTTTTCTGGG CGGCCCAACTGTGTATCACATGGACGTTGTGTCCAATCTTCTGTCGAGAA TTTGAACAGCGAAACAACAGCAAGTATTCTTAATGTAATGAAGCTTTGTG TATGCGGAACGAGCTTCTCGGGTGCACTTGATGGATTGGATACTCACCCC CTCCTTTTCTCGCAACATGCACAAACTGTCATGTTCGGGCAGGCAAATAG TAGTTGTGCGGTTGTGTGTTGTTTGTGATGGCGGTAATATCACGTGAGTT TTGTTTATTGAGCGGTGTCTCGTTGGAACGAAGAACCGGACCAGCTGTGC ACGTCTCTCCTGGGCTCGTTCCCGCTGTTCCTTATCTTTTGTTTCCTTCG CGGGGTTGGCATCCGGCGAAAGGAGTGTCCACCGAGTAAAACCCTCCCTC AGAGCTTCGGTAGAGTTGCGCGTCGTGCCATGCAGTCCCGGTCTTCCCAT AGAGAAGAGCACGTGCAAGCTCTATATAGTGGCGTTTAAGTGCGAGGGAG GACTACAGAGAACACGCGGAGACGCAGGGGCAGAAGCGGTTCGCTTACGT GGTGTGGTGGATACACCATAACGGCTCCCGGCCAGTGTACATGTATTAGA GACCGGGAGACGGACGGTGTTGGAGCTCACGTTATGCGGGGTGCTTGGCA CTCACTTCGTGGCTCGGGAG back to topprotein sequence of EsuBft98_15a-0001 >EsuBft98_15 ID=EsuBft98_15|Name=EsuBft98_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=352bp
MDVALEDNSFLLSDLDLSVVGHQDGEDNFQKSSVVITEQVRALEAALARH QDGRPEEADDTGGGAGIVNVAIARGMPRPDGNTDDSTSRAEALNFMRSEL QLLCIEAHRRRKESKPLLDGLELTAAQRQTMDRVHAAIAADFALRRLMLL RRCDVTVRSFLRDSISGGSGVGERKQDGGSAGGKGEQGEARGAADSSGGG DDEKFADLPPALRTRRQALLDKPREITIDDALIAPTSVARQHTHKTTAET TKAALPTADIGEVSDRGGRVSDARGEAVWKTRKEFDKAAAAAALSGKKGD SRGGGRGSGGKRGEKKGGGGGGRGAGEEQGKKERRNRRGGGGGGGGGGGG GX back to topmRNA from alignment at Scaffold_510:135775..141139+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft98_15a-0001 ID=EsuBft98_15a-0001|Name=EsuBft98_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5365bp|location=Sequence derived from alignment at Scaffold_510:135775..141139+ (Ectocarpus subulatus male Bft15b) GAACATACAGGAGGCAGGTCTCGTCCACCCCTGCGTCTCTCGCGTGTCAT
GGACGTCGCTCTGGAAGATAATAGTTTTCTCCTGTCCGACCTTGATCTTA
GTGTGGTCGGGCATCAGGATGGCGAGGACAACTTTCAAAAATCCTCCGTC
GTGATAACAGAGCAAGTACGGGCTCTCGAGGCAGCTTTAGCTCGGCACCA
GGATGGCCGTCCGGAAGAAGCGGATGATACTGGGGGCGGAGCGGGGATCG
TGAATGTTGCGATAGCACGCGGAATGCCGAGACCAGACGGGAACACCGAT
GATTCAACCTCGAGGTACTGAATATCAGCGTATATCCATTTCGTCTGTCA
ATCGGTGTTGAGCTGCTGCTGGTAGCACAGCAGTAGCGCAACCACTGCAA
TCTTAAGCTTCATATTGCCAATCTACAGTCGACCCCGCTTTAAGGACGCA
CATGGTTTTTCCCGAAAAAAAGCGTCCTTAAAGCGGGGTTGCGTCCTTAA
GATTCAGGGGACGATACCTCATCATCCCCGGGATCAAGGGAGGCATGCTA
TACCTCAAACTACGCGTCTTTTGCTAAGGAGGGGGGTGGTACGAAAAGTC
AGCATCGCCGAGACGACTGGCAACCGTTTGTTGACGTCGAACATATTTAC
AAAACTTTAAATGAGGTGTACAGCAGTTGGGGACGTGTTGAAAACAACTA
TAATACAGTACACCAGTTTGTACTTGGCCAACTAATGTACTGCATAACCG
GCAGCGGAAGAAGGAGGAAAGTCCAAGAAGATATATTTGTCTCATTCTTG
TGAAACAAAAAAAAGGAGCGTATTTCAGCGTCGCGCCGAGGAACACCAGT
ACATATCACTGTCCNTTAAATGAGGTGTACAGCAGTTGGGGACGTGTTGA
AAACAACTATAATACAGTACACCAGTTTGTACTTGGCCAACTAATGTACT
GCATAACCGGCAGCGGAAGAAGGAGGAAAGTCCAAGAAGATATATTTGTC
TCATTCTTGTGAAACAAAAAAAAGGAGCGTATTTCAGCGTCGCGCCGAGG
AACACCAGTACATATCACTGTCCCGGCGGAGACCAAAAGCTACCCTGATG
GCTTTTCCTTCCACATGTCGCGAAGAGTTCCCTGAACCTCCTCCCGCGGC
TTGGCTGTACGGCTCTGTTGAGTTTCATGAGTAAACGAATGAACGGTCTT
CGAAAGAAGGTACTGCGTCTCACGGTACTCGCCACCCCTTCCCTTTGCGT
TCAAATACAGATAGCGTCCGCAGGTAAGAAAAATTCTGTTAAGAAAAAAG
GGCTAAGAAACATAGCTCCATTTCGGCCACAACGTAAGGAACGCCCCAAC
AAGAAACGTGATGGTGCGATACCCCCATGACATCAGATATCTGCGGTGCT
TCCAACCCCCTCCCAAGCTGAACAGAAGTGCATTTTTTTTTGTACGGGGC
AGAGTCCCCCCCTCCCCGCCCCCCCGCGCCCCTGCTGTTCACAGTGAGTG
AGTGCTGTACTGTCTGTAGTCCTGCCACACATCGCGGACAACCATATGCT
CTCCGCTGTTGTACGGGTTTGATGGCACTCTCCACCACCTCTCTTGAGGG
CTTGATGATGTGGATTGTCCTCAGAGATCAAAAGACAGAAAAAAGAAAAT
ACGAAGTACTTGTTGTAGTCTACGGAATAAGAGAAATCGGGAGGATGCGA
CAGTCCAAGGAAGATGAAATGCCATTTACGAAATGGACGACTTGGGCCGG
TTCTTCGACTCAAAAGAAGTGATTGGTGAGGCTCGAACCGATTTTGACGT
TTCTTAATTGTGGGCGCTATCTGTAGGATCGAACGTCCTCCAAGCGAGAG
ATAACCTCGCCCTCGGTGAGGGACGAGGTTATGCACGACTCTTTTTTTTG
GCGGCATCAGATGGACCGCCGGTAGATGGGAGGAATCTATCCATACCAAC
ACCCAGTTACAGCTGCAGCAGCAGACCGCTCGCTACTTCTGCTGCCTGTG
CGTCGCTACTTCTGCACTCACTATGGTGCGTGGTTCGTGCAAAGACCGGC
CCGCAGGCCCGCAGGACACAAAAAGGGGGGTACGACCCGCAGAAAAATGG
GGGAACCCCCATCATCATATATTCTGCTGGGCCCCCTGTTGCTCAGCAGA
ACAAGTTTCCTTTACGCGGGGAGTTTCCTTAACGCGAGCGTCCTTAAAGC
GGGGTCGACTGTACTGCGTCACACCACACCAGAGCTGCACCGCGCTATTT
ATTGCGTCCTCACTGCATATCGTGCACACGTAGATCGGCGCAGAGCATAG
GAGAGGTTAACCTTTCCCGAAAAGATGAGGTTGTGCGACGATACCAATTG
CGCAAAAGGGAAGGACTTGGGTATCTGTACCTGTAGCGCCCTGCGGAGTG
CCCTAGAGCAGTGGTTCCTAAACGAAGAGTTTGTGTCTTTTGATGTGCGC
ACGGCAATGATGCGCCTGCATCTGGGTTGGGAACCTTGCCGTGTAATTGA
GGGTTAGGTGTACTGTACACATGGACAGTATTAGGTGTGAGGTCCGCAAG
AGGACATCCCATTTACCACACATGGATACACCGTTCACCGCAGAGGTTGA
TTTTGCAGAGGCTGACCAAGAGCATCAAGTTCCCTTGTGCGCTCTGTGTC
TGTGTGTCGTCCCTTTCATTGCTGTTTTGCCCCTTTTGTCCCTACACTCG
CTCGCTCGCTGTGCGATTCGTTTTCCTATTTTACCCGTTGTTCTAGGGCT
GAGGCACTGAACTTCATGCGCTCCGAACTTCAGCTCCTGTGCATAGAAGC
GCATCGGAGACGTAAAGAGGTGAGGAACGCGAAACACCCACGCAAACCTC
CTTCTTGTGTGTGGTGCAAGGGAATGTTGATCAGGAACCAGTGTTTTGTG
GTGCGTTGAAAAACGTGCAGAAATGGCACGCGGTGTGATACACTGCTTAC
ATGTATGCACGGTTTTCTGCAGTATATTTGTAGAGCACCGCCAACGTAAA
CCTGGCTCTCACGAGGTGAAACTCCCCACGGCGTTCCGTTTCCTCGTGGC
AAAAGGAATACAGTTCTGATATTCGACAGCAACAGCATGCGCGTCACAAC
GCCCGCACGCTCGCTCCCCCTGCTCCACCCCCATACCCACGCATCCACCC
GACCTCGAAAGAGCAAGCCCCTGCTCGACGGACTGGAACTGACGGCCGCA
CAGAGGCAAACGATGGACAGAGTTCACGCGGCCATCGCCGCGGACTTCGC
CCTGCGACGGCTCATGCTGCTTAGGCGCTGTGACGTGACCGTGCGGTCCT
TCCTGCGTGACAGCATCAGCGGCGGCAGCGGTGTCGGAGAAAGAAAGCAG
GATGGAGGGAGCGCAGGGGGCAAGGGGGAACAAGGAGAGGCACGAGGAGC
TGCGGATAGTAGTGGTGGTGGCGACGACGAGAAGTTTGCCGACCTTCCGC
CCGCCTTGAGAGTGAGAGACTACCCCTGTATGTTAAGATGGGAAGGATCA
TTGTATTGGCAGAGCAGTGTGGAGGTCAGGATATGGAGATTCAAGAAGCA
CAGACGCACGTACACTCCACAGCAGTACAATAATGTTCTCAAGTGTTTGG
TACAATGATTGTGTGCGATCGATCACAGTAGCACCCCTGTCGAACGGTTG
TTTGAGTTGACGTTGCAAGAAGAAGGTACATGGATGTGATCGTGATGGTT
GCCCCCCCACTGGTGACGCTTCGCAATCCTTTGCAGACAAGGCGACAAGC
GCTCTTGGACAAGCCTCGGGAAATCACGATAGATGACGCGCTGATCGCCC
CGACTTCGGTGGCTCGGCAGCATACCCACAAGACGACAGCAGAAGTGAGT
ACGTTGTCTTTTTCTTTGTGTTACCATCAACTATTTTGATCTGATTTCGC
TCATGCAATCAGCGCTCAAGTCCCGTAAGGGTGACAAGAATATATCCTTT
CTCTGTTATACATCTGCCCCCCGCTTTGTTTCCCCCCTCTTTCCATGCCT
CCCCACCTGACACTTGTTTCCGCTTTTTGTATTTTAACCCAAAATGAATA
CGACGGCGACGGTGGCGGCCACGGCGAGCGCTCCACGAAGACAACGAAGG
CTGCCTTACCAACCGCCGACATCGGCGAGGTTTCTGATCGTGGCGGGCGC
GTGAGCGATGCCCGCGGCGAGGCGGTCTGGAAGACCCGTAAGGAATTCGA
CAAAGCCGCCGCTGCTGCTGCTCTCTCAGGGAAAAAGGGTGACAGTCGTG
GCGGCGGGCGCGGCAGCGGTGGCAAGCGAGGCGAGAAAAAAGGAGGCGGC
GGCGGGGGAAGAGGTGCGGGCGAGGAGCAAGGGAAAAAGGAGCGTCGGAA
CCGTCGTGGCGGCGGCGGGGGGGGCGGGGGAGGGGGGGGGGGGGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGGGGAGGGGGGGGAGGAGGGAGAGGTGGTGGTGAAGGGCG
GGGTGGAGGGAACAAGAGGAAGTGGGGAGGGCGTGGAGACCAGGCACCGG
ATCAGCGCAGATAAACCAGTTGCGGTGTCCTTGGAGTTTTCTGGGCGGCC
CAACTGTGTATCACATGGACGTTGTGTCCAATCTTCTGTCGAGAATTTGA
ACAGCGAAACAACAGCAAGTATTCTTAATGTAATGAAGCTTTGTGTATGC
GGAACGAGCTTCTCGGGTGCACTTGATGGATTGGATACTCACCCCCTCCT
TTTCTCGCAACATGCACAAACTGTCATGTTCGGGCAGGCAAATAGTAGTT
GTGCGGTTGTGTGTTGTTTGTGATGGCGGTAATATCACGTGAGTTTTGTT
TATTGAGCGGTGTCTCGTTGGAACGAAGAACCGGACCAGCTGTGCACGTC
TCTCCTGGGCTCGTTCCCGCTGTTCCTTATCTTTTGTTTCCTTCGCGGGG
TTGGCATCCGGCGAAAGGAGTGTCCACCGAGTAAAACCCTCCCTCAGAGC
TTCGGTAGAGTTGCGCGTCGTGCCATGCAGTCCCGGTCTTCCCATAGAGA
AGAGCACGTGCAAGCTCTATATAGTGGCGTTTAAGTGCGAGGGAGGACTA
CAGAGAACACGCGGAGACGCAGGGGCAGAAGCGGTTCGCTTACGTGGTGT
GGTGGATACACCATAACGGCTCCCGGCCAGTGTACATGTATTAGAGACCG
GGAGACGGACGGTGTTGGAGCTCACGTTATGCGGGGTGCTTGGCACTCAC
TTCGTGGCTCGGGAG back to topCoding sequence (CDS) from alignment at Scaffold_510:135775..141139+ >EsuBft98_15a-0001 ID=EsuBft98_15a-0001|Name=EsuBft98_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1056bp|location=Sequence derived from alignment at Scaffold_510:135775..141139+ (Ectocarpus subulatus male Bft15b) ATGGACGTCGCTCTGGAAGATAATAGTTTTCTCCTGTCCGACCTTGATCT TAGTGTGGTCGGGCATCAGGATGGCGAGGACAACTTTCAAAAATCCTCCG TCGTGATAACAGAGCAAGTACGGGCTCTCGAGGCAGCTTTAGCTCGGCAC CAGGATGGCCGTCCGGAAGAAGCGGATGATACTGGGGGCGGAGCGGGGAT CGTGAATGTTGCGATAGCACGCGGAATGCCGAGACCAGACGGGAACACCG ATGATTCAACCTCGAGGGCTGAGGCACTGAACTTCATGCGCTCCGAACTT CAGCTCCTGTGCATAGAAGCGCATCGGAGACGTAAAGAGAGCAAGCCCCT GCTCGACGGACTGGAACTGACGGCCGCACAGAGGCAAACGATGGACAGAG TTCACGCGGCCATCGCCGCGGACTTCGCCCTGCGACGGCTCATGCTGCTT AGGCGCTGTGACGTGACCGTGCGGTCCTTCCTGCGTGACAGCATCAGCGG CGGCAGCGGTGTCGGAGAAAGAAAGCAGGATGGAGGGAGCGCAGGGGGCA AGGGGGAACAAGGAGAGGCACGAGGAGCTGCGGATAGTAGTGGTGGTGGC GACGACGAGAAGTTTGCCGACCTTCCGCCCGCCTTGAGAACAAGGCGACA AGCGCTCTTGGACAAGCCTCGGGAAATCACGATAGATGACGCGCTGATCG CCCCGACTTCGGTGGCTCGGCAGCATACCCACAAGACGACAGCAGAAACA ACGAAGGCTGCCTTACCAACCGCCGACATCGGCGAGGTTTCTGATCGTGG CGGGCGCGTGAGCGATGCCCGCGGCGAGGCGGTCTGGAAGACCCGTAAGG AATTCGACAAAGCCGCCGCTGCTGCTGCTCTCTCAGGGAAAAAGGGTGAC AGTCGTGGCGGCGGGCGCGGCAGCGGTGGCAAGCGAGGCGAGAAAAAAGG AGGCGGCGGCGGGGGAAGAGGTGCGGGCGAGGAGCAAGGGAAAAAGGAGC GTCGGAACCGTCGTGGCGGCGGCGGGGGGGGCGGGGGAGGGGGGGGGGGG GGNNNN back to top
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