Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft985_3 |
| Protein domains | TRANSMEMBRANE |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Length | 164 |
| Hectar predicted targeting category | signal anchor |
| Ec32 ortholog description | S-adenosyl-L-methionine-dependent methyltransferase |
| Ec32 ortholog | Ec-00_010600.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft985_3a-0001 ID=EsuBft985_3a-0001|Name=EsuBft985_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1644bp|location=Sequence derived from alignment at Scaffold_358:392159..395861+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCTCCTCTCTGCTATCCGAGCCACGACGCAAACGAAAGCGCACCGC
CAGGGCGACTTCCTCCTTCAGGTTAAACTATGGCACCGCGGGGAAGAACG
AAGGGAAGCGCTGCGCTAGGTGCCTGCCCTGGATTGCCGGGGTGTTCGGC
CTCACCATGGCCGTCATTGTTTGCGTGAGAAACGGGTTCAAAGACTTGGC
CAGAGAGAAAGCGAGGGACGCGCGGCTCGGGAGGGCAGAGGTCCACGCAA
AGTCTCATCCTCTGGCGCTGCTCCTCGAGGGGCAGCACGATATCGGGTCC
CAGGCCGCTCGTTTCGCGGATCCGGATGGGCATTGCCTGTACCCCTCGCC
CGGCGCTGATCAACCGATCGCCGAGAGACTGGGCGTGTTCACCTGCGTGG
CGGACACGCCGTTCTTCCTGCGCGCCCTGGCGGAGTCGTTACGGTTCCGT
TTCTTGGTGGTCGTAGATGTCGGCAGCGTGTCTCTTCGTCATGGTCTTCC
TGCTTCGTCACCTGGGTTGGGCGTGGCGCTCACCGGACTAGAATCGGAGA
TATTTCCTGATGCACCGCAGCTACAGGCACGGCATCGGGTGCGCATTGGT
AAATATCTGGCGCAAATAACGGCCGGCGAGGATCCGCTCCCAAATAACGC
CGATCTGATCCTCATTGATGTACACGAGGAAGTGCTGTCTGCAGATGACT
GGGTGGACCTGTTTCGCTCCTTGATGCGGGTGCGAACGTGTGCCTTCATT
CTGATAGAGTCGAGTCGAGAACGCTCGGCGTTATCAGATGACGGGGTGAT
TGTCATCCGCGGCCCGCGGGAGCAAGAAGACGCGACAACGGGTGCGGGGA
GGAACGAGGGAGCGGGGTCGACAATTCGCGCTTGGTACGGAAGCGGACAA
TTGTGGGACGCGGTGACGGCTCTCGCGTGCGACCAAGTTGCCGCTGCTGC
TGCTGTGGGCAATTTAGACGGCGGCATCATCGTGCTACGACACGCAGCAC
CTGGCGAAATAGATGTAAAGACTGTAAAGGCGAGATGTGGCCGTAACCAC
CCAGGGCAACAAGGGGGGGGCGGCGTAGCAAAGGGGGCGGTGGCGGCAGC
CCCACCACACCCATTGCGATTCGAAAGACTTTTCCTATGGTCGACCGCAC
AGGGTGACATTACCACAGTTACGGCGATCGAGGCTGTTCAGGCAAAGTTT
GGCGGAGCTAACGCGGTGCGGAAATACGCCCGGCGAAGGTACGACCGATC
GGCGTGCTTGAACACTTCGAACACCTTCGCCACCGCCGAAGCTGCGGCTT
GGAGCGAACCATCGTTAGAAGCGGAAAGCATGGGCGGTGGGCACCTCCGC
GCCGAACCGCGGCACATCCGCCACAAGAGTTTGCCACAAAGCGGCGCCGC
ATCCCAGTGGCACTCCGCTGCACGAGCGTGCCTGGAGACGCACTTGGAGG
AGCACTCTCAGGATGTGCGAGCCGGGTTCGCGCTCGAGATGGTGCTTAGG
GCGACCGGGGGCAGCGGGGTCGACAGGCAGGTTGCCCGCCTTCGAACGAG
AATGACTGAAGAGAGTGGACCGGCGGGAGGCCTCCTTTGGCGAGCGCTGC
ACGCGCGCGCGGCCGGTGTGGCGGCAACGGGGCTGCTCCTTTAG back to topprotein sequence of EsuBft985_3a-0001 >EsuBft985_3 ID=EsuBft985_3|Name=EsuBft985_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=547bp
MGSSLLSEPRRKRKRTARATSSFRLNYGTAGKNEGKRCARCLPWIAGVFG
LTMAVIVCVRNGFKDLAREKARDARLGRAEVHAKSHPLALLLEGQHDIGS
QAARFADPDGHCLYPSPGADQPIAERLGVFTCVADTPFFLRALAESLRFR
FLVVVDVGSVSLRHGLPASSPGLGVALTGLESEIFPDAPQLQARHRVRIG
KYLAQITAGEDPLPNNADLILIDVHEEVLSADDWVDLFRSLMRVRTCAFI
LIESSRERSALSDDGVIVIRGPREQEDATTGAGRNEGAGSTIRAWYGSGQ
LWDAVTALACDQVAAAAAVGNLDGGIIVLRHAAPGEIDVKTVKARCGRNH
PGQQGGGGVAKGAVAAAPPHPLRFERLFLWSTAQGDITTVTAIEAVQAKF
GGANAVRKYARRRYDRSACLNTSNTFATAEAAAWSEPSLEAESMGGGHLR
AEPRHIRHKSLPQSGAASQWHSAARACLETHLEEHSQDVRAGFALEMVLR
ATGGSGVDRQVARLRTRMTEESGPAGGLLWRALHARAAGVAATGLLL back to topmRNA from alignment at Scaffold_358:392159..395861+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft985_3a-0001 ID=EsuBft985_3a-0001|Name=EsuBft985_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3703bp|location=Sequence derived from alignment at Scaffold_358:392159..395861+ (Ectocarpus subulatus male Bft15b)
ATGGGCTCCTCTCTGCTATCCGAGCCACGACGCAAACGAAAGCGCACCGC
CAGGGCGACTTCCTCCTTCAGGTTAAACTATGGCACCGCGGGGAAGAACG
AAGGGAAGCGCTGCGCTAGGTGCCTGCCCTGGATTGCCGGGGTGTTCGGC
CTCACCATGGCCGTCATTGTTTGCGTGAGAAACGGGTTCAAAGACTTGGC
CAGAGAGAAAGCGAGGGACGCGCGGCTCGGGAGGGCAGAGGTCCACGCAA
AGTCTCATCCTCTGGCGCTGCTCCTCGAGGGGCAGCACGATATCGGGTCC
CAGGTACAGAGTAACCTGTACTATTAGCAGAGGTGCGCGTCGGCGGTGCA
ACTTGCTGAATTGACTTGGGTATTTGGCCATGTGTCTCACATAAAGGCCC
ACAACAAAGCATAATTCCGTTTCGCGTCTGTTTTCCAGGTCGTTGTCCCA
AGCAAGCCTAGGCCGCGGCAAGCCGCGGCGCTACAAGTAGATTGCTGTGC
ACCGTTAGCGCGAGGTTGCTGAAGGTGAAAAGCTACACGTTGCGTTCTAG
GTTGCTGCTGTACCGTTTGGGCGAAGCCGCGGCGCAAGCGGGGTGAGGGC
TAGGTTGTAGGGCGAGGTTGCTGTGCACGGTTAGCGCTAGGTTGCTGTGC
AGTGAAAGGCTAGGGTAGCACTGCTGGAGGTGTGCACACAGAACAAGATC
AACAAAGAGAATATTCCGAGAACCTTGTTCATCGAAAAATGGGCAAGCAT
TGCTGCTGTTGAGTTTTTGACTTCGACGCCGCAAACATGTGTCTCAGTGT
CGCATTACCCTTCAAGAGCATTCGTGTTTCGTCCTGGGATTGATCAACCT
ACGTTCGCAACCTACCCTACGGAGAGAAAGTTGCAGTCAACCCATCGTTC
CCATACTTCGTTGTTCGCCGCTTCAGTAAATAGGCCACGGGGGCGACCCA
GCTACGGTGTATGCGTTGACCTTGACAGATTCGCGTTCTACACCATGCAA
GTGGGTAACGAAACTACTTTTTTTTTGAGGGGGGGGGCAATTGGCTTGTG
ACCACGGAAGGCGACCGCGTCAGTTGGACCGTACGGACATTAGAAGGTTC
TGAGCGGAGACAGGGATGTTTTTTTTATTTGAGGACATCACCAACAATGT
CTTGCGTTCGTTATCTGGTATCCACGGTCGTTTTAACCATTTCCCGTTGT
GCCCTTCGCGTTTCCGCGGCTCCTCTATTCACCGCTGCTTTCTTTCTCCC
GACGCATCGATACCTTTCGACGGCGACCTGGATGGGGGACGTGGAACGCA
ATGGGGGCCTCTCTCTCTCTTTCGGCCAAACCAACCGACACCGACGGAAA
CTACCTCCAGGCCGCTCGTTTCGCGGATCCGGATGGGCATTGCCTGTACC
CCTCGCCCGGCGCTGATCAACCGATCGCCGAGAGACTGGGCGTGTTCACC
TGCGTGGCGGACACGCCGTTCTTCCTGCGCGCCCTGGCGGAGTCGTTACG
GTTCCGTTTCTTGGTGGTCGTAGATGTCGGCAGCGTGTCTCTTCGTCATG
GTCTTCCTGCTTCGTCACCTGGGTTGGGCGTGGCGCTCACCGGACTAGAA
TCGGAGATATTTCCTGATGCACCGCAGCTACAGGCACGGCATCGTTTAGG
GATAATCTAAGCCGATGGCATGCATTGTTTGCAATGCGATTCAGGGGTGC
GCATTGGTAAATATCTGGTAGAAACGGACCCACTGCTGTACGTCGAATAC
AAGACGGTTGTCCATGTGAATATGCAAGGGCGTCTTGGAGATGTACAAGA
ACAACTGCAGTGAAGCTAAGTAAGGAATGCTACAATACTCACTTTCTATT
CGGGTGTGGGCCCGTTCCGTGCACACAGACTCCTTCGGTGCATACTGCTT
TCGAAGCGTAGAGAAAGCGCTTTGGACGATCTTCTCGTTCTGTGCCGTTA
AACTTGCTTCTACTGCTGCTGCTTTCCCTGCATCATCCTGCATCAGGCGC
AAATAACGGCCGGCGAGGATCCGCTCCCAAATAACGCCGATCTGATCCTC
ATTGATGTACACGAGGAAGTGCTGTCTGCAGATGACTGGGTGGACCTGTT
TCGCTCCTTGATGCGGGTGCGAACGTGTGCCTTCATTCTGATAGAGTCGA
GTCGAGAACGCTCGGTGATTTTTTGCGATCGGCAAAAGTCACGAACGGTG
TCGCTGTGTATGGAGAGTCAAACAGAAGTAGTCGCTCGCAACACGCCCGA
TGTTTGAATGAGATAGTCACATGCTTGATCGAGGACGCGAAATTCTATTG
TTGTCCAAGGGCCACCGTCACGACGAACCAGTCCAAAACAGTCAAGGGGT
GGTAAACGTCGCCGCACTGCTGTGACCATGTCCTGTCCCGCAACCCCGAA
TGACATTTTGGTCCCATAGAAGCCGACGTTGTCCATATTGCCGCCCACGC
GACCTATGCTGCAGGTGAAAACCGTTTTATGTTCACTCATTGCCGACATC
GCATCCGTCTGGACCCTGCCAGGCGTTATCAGATGACGGGGTGATTGTCA
TCCGCGGCCCGCGGGAGCAAGAAGACGCGACAACGGGTGCGGGGAGGAAC
GAGGGAGCGGGGTCGACAATTCGCGCTTGGTACGGAAGCGGACAATTGTG
GGACGCGGTGACGGCTCTCGCGTGCGACCAAGTTGCCGCTGCTGCTGCTG
TGGGCAATTTAGACGGGTGAGCATGTCTCGTGCACCTTGGACATGACCCA
GGTGGATTTGACGTTTTTCAACATGAAACGAAGCGGAGTGCTACACGTGA
AGCTCGTATCCTTGGTCCCTCTTCGTGCTCCGGCTGGAGGGCCAATTTTC
GTTCCACAATGAACATCTACACGTTGTTTATATTCGGACTTAAGACTGTT
GCTTTATCGCATCACCCTCCCGTGTTTAAAAGACCTCGGGCCCTGCACGC
GTGCCCAGTTTGACCCTCTCCTAGGCATCGGTTGCCCCACTTTCTTGCAT
GTCCTCCTCGATGCGCGCCCATTAACCCAGCGGCATCATCGTGCTACGAC
ACGCAGCACCTGGCGAAATAGATGTAAAGACTGTAAAGGCGAGATGTGGC
CGTAACCACCCAGGGCAACAAGGGGGGGGCGGCGTAGCAAAGGGGGCGGT
GGCGGCAGCCCCACCACACCCATTGCGATTCGAAAGACTTTTCCTATGGT
CGACCGCACAGGGTGACATTACCACAGTTACGGCGATCGAGGCTGTTCAG
GCAAAGTTTGGCGGAGCTAACGCGGTGCGGAAATACGCCCGGCGAAGGTA
CGACCGATCGGCGTGCTTGAACACTTCGAACACCTTCGCCACCGCCGAAG
CTGCGGCTTGGAGCGAACCATCGTTAGAAGCGGAAAGCATGGGCGGTGGG
CACCTCCGCGCCGAACCGCGGCACATCCGCCACAAGAGTTTGCCACAAAG
CGGCGCCGCATCCCAGTGGCACTCCGCTGCACGAGCGTGCCTGGAGACGC
ACTTGGAGGAGCACTCTCAGGATGTGCGAGCCGGGTTCGCGCTCGAGATG
GTGCTTAGGGCGACCGGGGGCAGCGGGGTCGACAGGCAGGTTGCCCGCCT
TCGAACGAGAATGACTGAAGAGAGTGGACCGGCGGGAGGCCTCCTTTGGC
GAGCGCTGCACGCGCGCGCGGCCGGTGTGGCGGCAACGGGGCTGCTCCTT
TAG back to topCoding sequence (CDS) from alignment at Scaffold_358:392159..395861+ >EsuBft985_3a-0001 ID=EsuBft985_3a-0001|Name=EsuBft985_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1644bp|location=Sequence derived from alignment at Scaffold_358:392159..395861+ (Ectocarpus subulatus male Bft15b)
ATGGGCTCCTCTCTGCTATCCGAGCCACGACGCAAACGAAAGCGCACCGC
CAGGGCGACTTCCTCCTTCAGGTTAAACTATGGCACCGCGGGGAAGAACG
AAGGGAAGCGCTGCGCTAGGTGCCTGCCCTGGATTGCCGGGGTGTTCGGC
CTCACCATGGCCGTCATTGTTTGCGTGAGAAACGGGTTCAAAGACTTGGC
CAGAGAGAAAGCGAGGGACGCGCGGCTCGGGAGGGCAGAGGTCCACGCAA
AGTCTCATCCTCTGGCGCTGCTCCTCGAGGGGCAGCACGATATCGGGTCC
CAGGCCGCTCGTTTCGCGGATCCGGATGGGCATTGCCTGTACCCCTCGCC
CGGCGCTGATCAACCGATCGCCGAGAGACTGGGCGTGTTCACCTGCGTGG
CGGACACGCCGTTCTTCCTGCGCGCCCTGGCGGAGTCGTTACGGTTCCGT
TTCTTGGTGGTCGTAGATGTCGGCAGCGTGTCTCTTCGTCATGGTCTTCC
TGCTTCGTCACCTGGGTTGGGCGTGGCGCTCACCGGACTAGAATCGGAGA
TATTTCCTGATGCACCGCAGCTACAGGCACGGCATCGGGTGCGCATTGGT
AAATATCTGGCGCAAATAACGGCCGGCGAGGATCCGCTCCCAAATAACGC
CGATCTGATCCTCATTGATGTACACGAGGAAGTGCTGTCTGCAGATGACT
GGGTGGACCTGTTTCGCTCCTTGATGCGGGTGCGAACGTGTGCCTTCATT
CTGATAGAGTCGAGTCGAGAACGCTCGGCGTTATCAGATGACGGGGTGAT
TGTCATCCGCGGCCCGCGGGAGCAAGAAGACGCGACAACGGGTGCGGGGA
GGAACGAGGGAGCGGGGTCGACAATTCGCGCTTGGTACGGAAGCGGACAA
TTGTGGGACGCGGTGACGGCTCTCGCGTGCGACCAAGTTGCCGCTGCTGC
TGCTGTGGGCAATTTAGACGGCGGCATCATCGTGCTACGACACGCAGCAC
CTGGCGAAATAGATGTAAAGACTGTAAAGGCGAGATGTGGCCGTAACCAC
CCAGGGCAACAAGGGGGGGGCGGCGTAGCAAAGGGGGCGGTGGCGGCAGC
CCCACCACACCCATTGCGATTCGAAAGACTTTTCCTATGGTCGACCGCAC
AGGGTGACATTACCACAGTTACGGCGATCGAGGCTGTTCAGGCAAAGTTT
GGCGGAGCTAACGCGGTGCGGAAATACGCCCGGCGAAGGTACGACCGATC
GGCGTGCTTGAACACTTCGAACACCTTCGCCACCGCCGAAGCTGCGGCTT
GGAGCGAACCATCGTTAGAAGCGGAAAGCATGGGCGGTGGGCACCTCCGC
GCCGAACCGCGGCACATCCGCCACAAGAGTTTGCCACAAAGCGGCGCCGC
ATCCCAGTGGCACTCCGCTGCACGAGCGTGCCTGGAGACGCACTTGGAGG
AGCACTCTCAGGATGTGCGAGCCGGGTTCGCGCTCGAGATGGTGCTTAGG
GCGACCGGGGGCAGCGGGGTCGACAGGCAGGTTGCCCGCCTTCGAACGAG
AATGACTGAAGAGAGTGGACCGGCGGGAGGCCTCCTTTGGCGAGCGCTGC
ACGCGCGCGCGGCCGGTGTGGCGGCAACGGGGCTGCTCCTTTAG back to top
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