Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft985_10 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 45 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft985_10a-0001 ID=EsuBft985_10a-0001|Name=EsuBft985_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=450bp|location=Sequence derived from alignment at Scaffold_358:440865..444369+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTGCTCGGGATGCGAGCCCTGCTGCAGGAGAAGCTTCAGAAGACGCGTCT
TCTCCTGGAACAGAGGAAGAAAGACGACGAGGTGTTCGCCACCCACGGCG
TCAACGAGCCCGACTTCGGGGATCGCAAGAAGGAACACCAAGCACTCACC
TTGAAGACAGATGCGATTCGATCGGCCCACGCCAGCACAGAGGCCCGCAA
AGCGGCGCATGAAGAGGAGAAACGCCGTGTGGCGAAAGAAACGGCAGCGG
AGAGAGTCTCGATTGGGGCGGAAATTTTGGCGGAGGACAATGAACACGCT
CGCGTCGTCGCTGAGTGCAATGAGACCTCTGCCGCCGTCGCCAACAAGGA
GCTCTCGGTCGCTGGCAAGAGGGCGGAGCACGCGTCTGCCGAAGGTGCGG
GAGAGCGAGGTTGCGAGACAAGCCAGGCCGCCTGCCAGAGGAATGTGTAG back to topprotein sequence of EsuBft985_10a-0001 >EsuBft985_10 ID=EsuBft985_10|Name=EsuBft985_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=146bp
MRALLQEKLQKTRLLLEQRKKDDEVFATHGVNEPDFGDRKKEHQALTLKT
DAIRSAHASTEARKAAHEEEKRRVAKETAAERVSIGAEILAEDNEHARVV
AECNETSAAVANKELSVAGKRAEHASAEGAGERGCETSQAACQRNV back to topmRNA from alignment at Scaffold_358:440865..444369+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft985_10a-0001 ID=EsuBft985_10a-0001|Name=EsuBft985_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3505bp|location=Sequence derived from alignment at Scaffold_358:440865..444369+ (Ectocarpus subulatus male Bft15b)
GTGCTCGGGATGCGAGCCCTGCTGCAGGAGAAGCTTCAGAAGACGCGTCT
TCTCCTGGAACAGAGGAAGAAAGACGACGAGGTGTTCGCCACCCACGGCG
TCAACGAGCCCGACTTCGGGGATCGCAAGAAGGAACACCAAGCACTCACC
TTGAAGACAGATGCGATTCGGTAAGTCGGGACTCAATGGATGTTTACGTA
CCGCTACCTAACGCGGCGATAGGGCTTCCTCCCATATGACTAAATACCCG
CCGAAAGGAAGCGGGAAGAAGTTTTTTATTGCTTTGGTGGGGGTGTGCTT
TTGGTGTTCAATGGTTGGTCTTCAAACGTCCGCGTTTCCTGCTGTCGCTG
TTGTTGCTGCTGTTGTCATTTATGGTTTTATCCACCAGGGCTCCAGATCA
TGTTGAACCCACAGGCGCACCTCACTTTGCATGGCGCTCCTAGTGCCTCG
CGCTTCCGCTGATGCATCCATACGTGAAACGTGCTGGAGTGTTTCTGCTT
GTCGATTTTGAGGCTTCCAGACGATTCCCTTTTTGAGGCTTCGAGTTGCT
TCCCCCTCCCCTCCGTATTGTTTACCTTCCCCTTCTCCGCCCTCCGCCCC
CCCCGGTGTTTGCTATCGGGGTTGGGTTTTCGTCGCTTGGCAAAGACGTT
GTAAAACAAGCCAATTCACTTCGTGAACTCGGCAACCAGGTTACCGTTTT
TTTTTTTCCTCCGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTGGCGGTAACCATA
ATGGTGGTCGAGTAGATCATGTTGTGCGGGGTGGATAACCCTCACTCCGC
GCAAGGGGAATGACCGCACCACGTTGTGTTAACATGGTCAAGCACCCTCG
AGGCAGTTACACAGTGCTTACAACTGTCTCTGGAAGTGAAAGCACCAGAA
ATGAAATTAAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCC
TTCTTCTCTCGTTTGCTGTTTGAAACTGGCCCCCTGGACAGATCGGCCCA
CGCCAGCACAGAGGCCCGCAAAGCGGCGCATGAAGAGGAGAAACGCCGTG
TGGCGAAAGAAACGGCAGCGGAGAGAGTCTCGATTGGGGCGGAAATTTTG
GCGGAGGACAATGTGGGTATCTCTGCCGTTTGATCCAAGAACCGGAAGCC
GTCCTACGTATTTGTTGCCGTTGCACAGAAGGAGCTGTGATGTTGGCGAC
TAGATAGTGTGTTGCCTTTCGCGAACGTTGCAGGGCGGACTCCTTGTTCT
AGTTCTTGGTTTTGACATCGAAAGAGTTTTTTTCTCGCTACGTGAAGGGA
AACAATAGTCGACGAACACACGCCACGGAAGTTGTTAATCCCCAGGCGTT
GAACCAGAAGTTACTTTTTTTTCATCTCTCGACCGGCCGATCTGATCAAC
GAAGCACGTGATAATACGACCGATGAACTACATGTCACTACTCCAGGAAC
ACGCTCGCGTCGTCGCTGAGTGCAATGAGACCTCTGCCGCCGTCGCCAAC
AAGGAGCTCTCGGTCGCTGGCAAGAGGGCGGAGCACGCGTCTGCCGAAGG
TGCGGGAGAGCGAGGTTGCGAGACAAGCCAGGCCGCCTGCCAGAGGAATG
TGTAG back to topCoding sequence (CDS) from alignment at Scaffold_358:440865..444369+ >EsuBft985_10a-0001 ID=EsuBft985_10a-0001|Name=EsuBft985_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=441bp|location=Sequence derived from alignment at Scaffold_358:440865..444369+ (Ectocarpus subulatus male Bft15b)
ATGCGAGCCCTGCTGCAGGAGAAGCTTCAGAAGACGCGTCTTCTCCTGGA
ACAGAGGAAGAAAGACGACGAGGTGTTCGCCACCCACGGCGTCAACGAGC
CCGACTTCGGGGATCGCAAGAAGGAACACCAAGCACTCACCTTGAAGACA
GATGCGATTCGATCGGCCCACGCCAGCACAGAGGCCCGCAAAGCGGCGCA
TGAAGAGGAGAAACGCCGTGTGGCGAAAGAAACGGCAGCGGAGAGAGTCT
CGATTGGGGCGGAAATTTTGGCGGAGGACAATGAACACGCTCGCGTCGTC
GCTGAGTGCAATGAGACCTCTGCCGCCGTCGCCAACAAGGAGCTCTCGGT
CGCTGGCAAGAGGGCGGAGCACGCGTCTGCCGAAGGTGCGGGAGAGCGAG
GTTGCGAGACAAGCCAGGCCGCCTGCCAGAGGAATGTGTAG back to top
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