EsuBft97_10a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft97_10a-0001
Unique NameEsuBft97_10a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_523contigScaffold_523:344694..346732 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G873
ProteomeIdEsuBft97_10
Protein domainsCoil
Protein domainsSignalP-noTM
Ownerapollo_admin@sb-roscoff.fr
Nb exon3
Max annot lvl2759|Eukaryota
Length142
Hectar predicted targeting categoryother localisation
Evalue1.01e-126
EggNOG OGsCOG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota
Date last modified2016-06-13
Date creation2016-06-13
KEGG rclassRC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496
KEGG koko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437
KEGG ReactionR00851,R03875,R03938,R04866,R04867,R09380
KEGG Pathwayko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202
KEGG ModuleM00089
EC2.1.1.43,2.3.1.15,3.6.4.12
Descriptionacetylation-dependent protein binding
COG categoryBK
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft97_10aEsuBft97_10aEctocarpus subulatus male Bft15bgeneScaffold_523 344694..346732 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft97_10a-0001-exonEsuBft97_10a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_523 344694..345902 -
EsuBft97_10a-0001-exonagat-exon-41858Ectocarpus subulatus male Bft15bexonScaffold_523 346437..346584 -
EsuBft97_10a-0001-exonagat-exon-41859Ectocarpus subulatus male Bft15bexonScaffold_523 346665..346732 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft97_10a-0001-cdsEsuBft97_10a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_523 344694..345902 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft97_10a-0001EsuBft97_10Ectocarpus subulatus male Bft15bpolypeptideScaffold_523 344694..346732 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft97_10a-0001 ID=EsuBft97_10a-0001|Name=EsuBft97_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1425bp|location=Sequence derived from alignment at Scaffold_523:344694..346732- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGTTTGGGGGGAAGGGGATGATCCAGCTGATGGTACTGCTGTACAA
TTGGGTGTGGAAAAACGAGGGGATTACACTGTTGAACACAGTAGGAAAGG
TGTTGTGTAAGCTGCTGAACGATAGGAAAGCGGGAGTATTGGAGAAAGAA
CATAGCATTAGTGAGGGCCAGGCAGGTTTCCGCAAGAAGAGGGGGTGCGT
AGACCACGTGTTCACGATTGACGCGGCGAAGAAGTTTACTGATAAGTGGA
GATTGTCTGCCAACGTTCAGAAGAGTGCCGTCATGGTATGCAACGAGAAC
AAGGAGGAACCAGTAGAACATAGATGGAAGTGGGGGATCGAGGAGATTGC
AGTAGTGGACCAGTACACATACCTCGGAGTAGAGATCGCAAAAGACTGCT
CGTGGAATGCACACATGTCCAAGGTAGCGGAAAAGGGCAAATCACGAGCA
GGGAAGCTGCATCCAATACTCGCAAACCGGCACCTCGATACACGCATCAA
ATTGACGGTTTTGAAGAGCGTAATCGTACCGCCGCTAGAGTACGCCGGAG
AAGTATGGGAAGGAAATAAGAAGGTAGTGAAAGAACTCGAGGCGGCGCAG
ATGAAAGCAGCGAAAATCATCCTAGGATGCTCCACGCGCACAAGTAATGC
AGCCGTGAGGGCAGAATTGGGGATCCAATCCCTACGGTCGGGAAGAGACG
CGAGGAAGCTGACCTGGCAGTATCGCATGTGCGGGATGGGAGAGGAGAGG
TTGCCGAGAATTGTATGGGAGGCGAAGTGGGCAAACAAAAAGAGGGGTAG
ACAACCCACGGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGCTCG
ACATCGACGAAGATGAAACGCTGGAAACGGAGGGTCTACAGGGGTTCAAG
GAGAAGATATCTGTTGCTTGTGCCGAGAGAGAAGAACAGAATCTGAGGAA
AGAATCCAAGGATAAGGAGGGTCTAGAAGTGTACGGAATGTTGAAGGAAG
GAATAGGGTTCAAGGACTACCTACATGGACCAATGGATGCAGGAACAAAG
CTTAAGGTCAAATTCAGGACCGGGGACATAGGCCTTCGAGAACGTCGACG
AAGACATAGGACGGTAGACGAGGAAGACGACGAGTTCAAATGTGATTGCG
GCTTCGAATGCGAAGACCGTGTTCATGTAGTCGCGGAATGTCCGTTGTAC
AAGAAGGAGAGGGAAGTGTACGTGACTGAGCTGGGAAAAATAGATGGAAC
GGACAGGGAGATGTTTGAGGCATGGAAAAGAGGGGAAAGGACGGTAGCTG
TAGTGGGGCATAGGAGATGGGTTGAAAAGGCGGGAAGGGATATCGTTAGG
ATAGACAGACTAGGGAAGACATTTTTGAGCCACCTTTGGCAAAGTAGAAA
GGAACGATTGGCCATCGGTGATNNN
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protein sequence of EsuBft97_10a-0001

>EsuBft97_10 ID=EsuBft97_10|Name=EsuBft97_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=475bp
MKFGGKGMIQLMVLLYNWVWKNEGITLLNTVGKVLCKLLNDRKAGVLEKE
HSISEGQAGFRKKRGCVDHVFTIDAAKKFTDKWRLSANVQKSAVMVCNEN
KEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKSRA
GKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQ
MKAAKIILGCSTRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEER
LPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFK
EKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTK
LKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLY
KKEREVYVTELGKIDGTDREMFEAWKRGERTVAVVGHRRWVEKAGRDIVR
IDRLGKTFLSHLWQSRKERLAIGDX
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mRNA from alignment at Scaffold_523:344694..346732-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft97_10a-0001 ID=EsuBft97_10a-0001|Name=EsuBft97_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2039bp|location=Sequence derived from alignment at Scaffold_523:344694..346732- (Ectocarpus subulatus male Bft15b)
ATGAAGTTTGGGGGGAAGGGGATGATCCAGCTGATGGTACTGCTGTACAA
TTGGGTGTGGAAAAACGAGTATACGCCAAGTAGATGGAGGGAAGGAGTGG
TTGTGAAGTTGTTTAAGAAGGAGGCAAGACTGACTCAGGAAACTACAGGG
GGATTACACTGTTGAACACAGTAGGAAAGGTGTTGTGTAAGCTGCTGAAC
GATAGGAAAGCGGGAGTATTGGAGAAAGAACATAGCATTAGTGAGGGCCA
GGCAGGTTTCCGCAAGAAGAGGGGGTGCGTAGACCACGTGTTCACGGTAG
GGAGAATCATCCAAGGTAGAAAGAGGGCGGGAAAGCCGACGTACTGCTTC
TTCCTGGATGCTAGATATACTCGCAGCAGTATCTGATCGTGAGGATCCCA
GGGGATACGTGTTGGGAATTTCGTGTGTAGTAGGGTACCACCGGTGCAGT
CACGGGGATCCTTTTGGCGCGGTTGGTGCGATGGACCTTGCGTGCGTGCT
GCGTACTTCTTCCCTCTCTCTCTCCACCACCACCACCGTCTCTCTCCANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGGCGCCGGATGAGGGACTGCAACTGCAGATTGACGCGGCGAAGAAGTT
TACTGATAAGTGGAGATTGTCTGCCAACGTTCAGAAGAGTGCCGTCATGG
TATGCAACGAGAACAAGGAGGAACCAGTAGAACATAGATGGAAGTGGGGG
ATCGAGGAGATTGCAGTAGTGGACCAGTACACATACCTCGGAGTAGAGAT
CGCAAAAGACTGCTCGTGGAATGCACACATGTCCAAGGTAGCGGAAAAGG
GCAAATCACGAGCAGGGAAGCTGCATCCAATACTCGCAAACCGGCACCTC
GATACACGCATCAAATTGACGGTTTTGAAGAGCGTAATCGTACCGCCGCT
AGAGTACGCCGGAGAAGTATGGGAAGGAAATAAGAAGGTAGTGAAAGAAC
TCGAGGCGGCGCAGATGAAAGCAGCGAAAATCATCCTAGGATGCTCCACG
CGCACAAGTAATGCAGCCGTGAGGGCAGAATTGGGGATCCAATCCCTACG
GTCGGGAAGAGACGCGAGGAAGCTGACCTGGCAGTATCGCATGTGCGGGA
TGGGAGAGGAGAGGTTGCCGAGAATTGTATGGGAGGCGAAGTGGGCAAAC
AAAAAGAGGGGTAGACAACCCACGGAATGGGTCAAGGTTGTAGAGGACGT
ATGGAAGGGGCTCGACATCGACGAAGATGAAACGCTGGAAACGGAGGGTC
TACAGGGGTTCAAGGAGAAGATATCTGTTGCTTGTGCCGAGAGAGAAGAA
CAGAATCTGAGGAAAGAATCCAAGGATAAGGAGGGTCTAGAAGTGTACGG
AATGTTGAAGGAAGGAATAGGGTTCAAGGACTACCTACATGGACCAATGG
ATGCAGGAACAAAGCTTAAGGTCAAATTCAGGACCGGGGACATAGGCCTT
CGAGAACGTCGACGAAGACATAGGACGGTAGACGAGGAAGACGACGAGTT
CAAATGTGATTGCGGCTTCGAATGCGAAGACCGTGTTCATGTAGTCGCGG
AATGTCCGTTGTACAAGAAGGAGAGGGAAGTGTACGTGACTGAGCTGGGA
AAAATAGATGGAACGGACAGGGAGATGTTTGAGGCATGGAAAAGAGGGGA
AAGGACGGTAGCTGTAGTGGGGCATAGGAGATGGGTTGAAAAGGCGGGAA
GGGATATCGTTAGGATAGACAGACTAGGGAAGACATTTTTGAGCCACCTT
TGGCAAAGTAGAAAGGAACGATTGGCCATCGGTGATNNN
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Coding sequence (CDS) from alignment at Scaffold_523:344694..346732-

>EsuBft97_10a-0001 ID=EsuBft97_10a-0001|Name=EsuBft97_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1425bp|location=Sequence derived from alignment at Scaffold_523:344694..346732- (Ectocarpus subulatus male Bft15b)
ATGAAGTTTGGGGGGAAGGGGATGATCCAGCTGATGGTACTGCTGTACAA
TTGGGTGTGGAAAAACGAGGGGATTACACTGTTGAACACAGTAGGAAAGG
TGTTGTGTAAGCTGCTGAACGATAGGAAAGCGGGAGTATTGGAGAAAGAA
CATAGCATTAGTGAGGGCCAGGCAGGTTTCCGCAAGAAGAGGGGGTGCGT
AGACCACGTGTTCACGATTGACGCGGCGAAGAAGTTTACTGATAAGTGGA
GATTGTCTGCCAACGTTCAGAAGAGTGCCGTCATGGTATGCAACGAGAAC
AAGGAGGAACCAGTAGAACATAGATGGAAGTGGGGGATCGAGGAGATTGC
AGTAGTGGACCAGTACACATACCTCGGAGTAGAGATCGCAAAAGACTGCT
CGTGGAATGCACACATGTCCAAGGTAGCGGAAAAGGGCAAATCACGAGCA
GGGAAGCTGCATCCAATACTCGCAAACCGGCACCTCGATACACGCATCAA
ATTGACGGTTTTGAAGAGCGTAATCGTACCGCCGCTAGAGTACGCCGGAG
AAGTATGGGAAGGAAATAAGAAGGTAGTGAAAGAACTCGAGGCGGCGCAG
ATGAAAGCAGCGAAAATCATCCTAGGATGCTCCACGCGCACAAGTAATGC
AGCCGTGAGGGCAGAATTGGGGATCCAATCCCTACGGTCGGGAAGAGACG
CGAGGAAGCTGACCTGGCAGTATCGCATGTGCGGGATGGGAGAGGAGAGG
TTGCCGAGAATTGTATGGGAGGCGAAGTGGGCAAACAAAAAGAGGGGTAG
ACAACCCACGGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGCTCG
ACATCGACGAAGATGAAACGCTGGAAACGGAGGGTCTACAGGGGTTCAAG
GAGAAGATATCTGTTGCTTGTGCCGAGAGAGAAGAACAGAATCTGAGGAA
AGAATCCAAGGATAAGGAGGGTCTAGAAGTGTACGGAATGTTGAAGGAAG
GAATAGGGTTCAAGGACTACCTACATGGACCAATGGATGCAGGAACAAAG
CTTAAGGTCAAATTCAGGACCGGGGACATAGGCCTTCGAGAACGTCGACG
AAGACATAGGACGGTAGACGAGGAAGACGACGAGTTCAAATGTGATTGCG
GCTTCGAATGCGAAGACCGTGTTCATGTAGTCGCGGAATGTCCGTTGTAC
AAGAAGGAGAGGGAAGTGTACGTGACTGAGCTGGGAAAAATAGATGGAAC
GGACAGGGAGATGTTTGAGGCATGGAAAAGAGGGGAAAGGACGGTAGCTG
TAGTGGGGCATAGGAGATGGGTTGAAAAGGCGGGAAGGGATATCGTTAGG
ATAGACAGACTAGGGAAGACATTTTTGAGCCACCTTTGGCAAAGTAGAAA
GGAACGATTGGCCATCGGTGATNNN
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