|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 1122134.KB893650_gene540 |
ProteomeId | EsuBft971_8 |
Protein domains | SIGNAL_PEPTIDE_C_REGION |
Protein domains | NON_CYTOPLASMIC_DOMAIN |
Protein domains | SignalP-noTM |
Protein domains | SIGNAL_PEPTIDE_H_REGION |
Protein domains | IPR029063 |
Protein domains | SIGNAL_PEPTIDE |
Protein domains | PF13489 |
Protein domains | IPR001763 |
Protein domains | SIGNAL_PEPTIDE_N_REGION |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 5 |
Max annot lvl | 135619|Oceanospirillales |
Length | 239 |
Hectar predicted targeting category | signal peptide |
Evalue | 1.17e-14 |
EggNOG OGs | COG0607@1|root,COG2890@1|root,COG0607@2|Bacteria,COG2890@2|Bacteria,1QUYS@1224|Proteobacteria,1T4P4@1236|Gammaproteobacteria,1XMQY@135619|Oceanospirillales |
Ec32 ortholog description | S-adenosyl-L-methionine-dependent methyltransferase |
Ec32 ortholog | Ec-01_006170.2 |
Date last modified | 2016-06-15 |
Date creation | 2016-06-15 |
Description | Tellurite resistance protein TehB |
COG category | JP |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft971_8a-0001 ID=EsuBft971_8a-0001|Name=EsuBft971_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2391bp|location=Sequence derived from alignment at Scaffold_301:61532..66442+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CGCCGCCGTACGATCGTGTTGCACCACACCCCATACGTTAGCTGATGGGC TCTGAGGTTTCTCGCCGCCCCCCTGTGCCTCCTTCAGTCATTCCCGATCA GCACCAGGGGTCGAAGAGTGACTTTGGTGGGGAGGTGGACATCGAAGAGG CCATCGATAAGTCTGGTTGCTCGTCCATCTACTACCTTCTGGAGGACTGC CTCGGAGAGCACGATCGAGACTGGCGACGGTGCCAAGAGCAGGTTAAGGC TCTCAAGGCGTGCAACGACAAGAACAGGGCACGGGCTGCCGCAGGAAGAA CCTGAGCAGGACCGCAGCCAGCAAACCGGCCTCCCCCCTGCCTTGGCCAT CACATCCCGCCTGTGCCCGGGAAGCGTGCTCGCTGCACACCCACCCTTTT TCGTGTTCCCGAGATGGGTGCGGCAAGGAGCGCGCCGACGCTGCTGCACT GGTGCCTCTCGCTCCTCCTGCAACTTCTTCTGCAGATGCAAATGGGCATG GTATGTGGCTTTTTGGTTCCTTCGCAGCCAAGAGGAATGCCAAGCATTGA AAAGAGCAACATTATCCGGCCGCCCCCCACCGCCGCCACCTCGTACACAA CCGTAGCCGCAGCGTCCAGAGCCGGAGCTGGGGCGACGAGCTTCACCATG GCGAGCGTAGCGGGAACAGCAGTAGGCGAGTCGACTACGTCTCAGACGCG GACAGTACCATCCGTCGGAGCAGCAGGAGCGAGTCCTGATCCTTTCGCGA AGCCATCAGAGTTCCAGGAGTATGTGGGGCGGCGCAAGTCGGGCTCCCGC AGGGTGGTGCTCGACCTTCGGCCTAGGGCGGACTTTCGTCGGGAGCACCT CGAGGGATCAACGTCCATCCCCATCGACGAGCTGGAGCCCAGGCTCTTGG AGTTGCCCCCTCCCTTCGCACAGCCCGTGAACATTGTCGGCAGCCAACAG GAGCTTCGTATGGCGAGGGACTTCCTCACGAACAAAGGCTGGCAGATCGA CGAAGAAATAGACCTGTCAGTGGCGGCTTGTGTAAACAACCCGGCACATC CAACTGAAGCCTGGCCCACCGAAACTGGATCGACGTCCCTCCAGGTATGG AGGGCAAACGATTTCCTGGAGTTTTGCATGGACCGCTTCGTGCTGCCTTC GGCCCATGACGCCGGCCCTTTCCCCGGCAAAGGCCTGGTCCTAGACTTGG GCTGTGGCAGCGGCCGTGACACTGTCTACATGGCGCAGCGCCTGCCTCCT GGCACCCGCGTAGTCGGTGTCGACAACCACTCGTACGCTCTGGAAAGGGG CGCGAGGCTGGCCGAACGGTGGCTGGAAGACACGTCTTCGGGAAAAGTTG TTGGTGGCAGTGGTAATGGTGGCGGCAGCGAAGAAGGCGCGACGCGATCG CAACGAGAAACCCAGACCGGCTGTTTGGGAGGGGTCAGAAGTCGGGCTGG CGGACGGAGCGATACCGACGGCAGAGAAGGGACAACGCAGGGACAACCCC CGGAAGTGCGGCAAAGGGCGTGCGAGTGGTCGCTCACCGACCTCAGGAAA GAGGGTTCGCTTGACGCAATGCGGGCTTCCATTGTCCACGGGCACCGGTT CAAGTGCGAGCGTCTGTTACCTCTACTTCGAGATCATGTGCTGCTCCCAG GGGGCTATTTCATCTGGTCTACGTTTTTGGACACGGGATCGGAGAATTTA GTGCCGCCATGGCGACCGAGTCGCATGATGAGACCCGGCGAGCTGGCGGA CATCTTCTCTGGCGATGGGTTTGAGATCCTGGTGGACGAACAAGGGGAAT TACCCACGCGGGGCTCGACGGTGCCAGCGAATTTCTTCATCTGTCGAAAA CTACCGACGACATGCACAATGAAATGATGCTGCTGCTGTCTCAAGTTGGT GTTATCCGTGGCATTGCAGAGAGGTGTTGTACAAATTGTTTAACGTTATG TACTGAGGTGCTGCATTCGAACTACATGCCAGTGTTGCAGACCTCCGTCG TATGTGAGGCTTTTTTGATGCAGCGGTTGCAAAGTTATCGTTTGCTTTTG GGGGCATTTCGTCTTTTTTTTTTTCCGCTTAGTCCGCTTGCCGCTCGTCC TTTTATGTCGAGGGTGAGTAGAGTATGCGCTGGATGTGTGCGCACAACGC GGTGTAACCGTGTGCGGCATCGCCCGCGTTTCAGGATGTGTATGGATGGA GAAAAGGATGAACGCGTGTGAGACCGCTTCTCGTGCAGTTATTATCGGAA TTACGCTGCGAGCGCTTCTTCCATACCGCCCCGCGTAAGTTGGTCAGCCG TGTTAGGTACTGCATAACCGCTGTAAAGTACTGTATGGCCATGGGACCAG CAATTGGAAGCGTTTTTCCAAGGAGGATAATTCGATATGGC back to topprotein sequence of EsuBft971_8a-0001 >EsuBft971_8 ID=EsuBft971_8|Name=EsuBft971_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=487bp
MGAARSAPTLLHWCLSLLLQLLLQMQMGMVCGFLVPSQPRGMPSIEKSNI IRPPPTAATSYTTVAAASRAGAGATSFTMASVAGTAVGESTTSQTRTVPS VGAAGASPDPFAKPSEFQEYVGRRKSGSRRVVLDLRPRADFRREHLEGST SIPIDELEPRLLELPPPFAQPVNIVGSQQELRMARDFLTNKGWQIDEEID LSVAACVNNPAHPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLPSAHDA GPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLA ERWLEDTSSGKVVGGSGNGGGSEEGATRSQRETQTGCLGGVRSRAGGRSD TDGREGTTQGQPPEVRQRACEWSLTDLRKEGSLDAMRASIVHGHRFKCER LLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMRPGELADIFSG DGFEILVDEQGELPTRGSTVPANFFICRKLPTTCTMK back to topmRNA from alignment at Scaffold_301:61532..66442+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft971_8a-0001 ID=EsuBft971_8a-0001|Name=EsuBft971_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4911bp|location=Sequence derived from alignment at Scaffold_301:61532..66442+ (Ectocarpus subulatus male Bft15b) CGCCGCCGTACGATCGTGTTGCACCACACCCCATACGTTAGCTGATGGGC
TCTGAGGTTTCTCGCCGCCCCCCTGTGCCTCCTTCAGTCATTCCCGATCA
GCACCAGGGGTCGAAGAGTGACTTTGGTGGGGAGGTGGACATCGAAGAGG
CCATCGATAAGTCTGGTTGCTCGTCCATCTACTACCTTCTGGAGGACTGC
CTCGGAGAGCACGATCGAGACTGGCGACGGTGCCAAGAGCAGGTGCGACA
GCAGTCCAGGCGCAACTACCGGGCAGAAGTCGTACTGGTTTGCCTGTTTT
GTGTAGACGACACATGTGGCAACCCCGGCAGTGGTGCTGCAAGAGCACAG
CAGCAACGATGTTCAACATAAGTTACGGTTCACCGCAGGATCCTCGGCAG
CTGCGCGAACGCCGCGGTGGCATCTACTCAGAGTGAGGTCGCTCGCATAG
TTGGTTTGACGTATTCGACGCCCCTGCTGCTGTGCCTGTTCCCGTCGGAC
CCCATCGCCCCTTCTGTGTTTCAGGTTAAGGCTCTCAAGGCGTGCAACGA
CAAGAACAGGGCACGGGCTGCCGCAGGAAGAACCTGAGCAGGACCGCAGC
CAGCAAACCGGCCTCCCCCCTGCCTTGGCCATCACATCCCGCCTGTGCCC
GGGAAGCGTGCTCGCTGCACACCCACCCTTTTTCGTGTTCCCGAGATGGG
TGCGGCAAGGAGCGCGCCGACGCTGCTGCACTGGTGCCTCTCGCTCCTCC
TGCAACTTCTTCTGCAGATGCAAATGGGCATGGTATGTGGCTTTTTGGTT
CCTTCGCAGCCAAGAGGAATGCCAAGCATTGAAAAGAGCAACATTATCCG
GCCGCCCCCCACCGCCGCCACCTCGTACACAACCGTAGCCGCAGCGTCCA
GAGCCGGAGCTGGGGCGACGAGCTTCACCATGGCGAGCGTAGCGGGAACA
GCAGTAGGCGAGTCGACTACGTCTCAGACGCGGACAGTACCATCCGTCGG
AGCAGCAGGAGCGAGTCCTGATCCTTTCGCGAAGCCATCAGAGTTCCAGG
AGTATGTGGGGCGGCGCAAGTCGGGCTCCCGCAGGGTGGTGCTCGACCTT
CGGCCTAGGGCGGACTTTCGTCGGGAGCACCTCGAGGGATCAACGTCCAT
CCCCATCGACGAGCTGGAGCCCAGGCTCTTGGAGTTGCCCCCTCCCTTCG
CACAGCCCGTGAACATTGTCGGCAGCCAACAGGTATGCACACGTCTCTTT
TAGAGTTTTAGTTTGCAGTTTGCATAGTCTAAATCCCCACGCAACTGACG
AGCACTGCTGCGATATATGTTGATGGCAGTGTGGGTCATGCCGGTTGTTG
TCCGTAACTGGACCGTAGCTATTATTCCATGATGTAGCCGTCATCAGGGT
AGTGAACTCTGTAGTTGACGCTTTCATGTCCCCCTTACATGTGCACAACC
CGGGACCTCGGAGATGGATTTATCGGTTTGACTGCCCGTAACCGCGAGGC
TGCGCGAAAACCTAAGACAAACCCTTCGACATGCAAATCAAAACTGTAGG
CTCGAATTCCTTTGACATGCAAACCAAAACTGCAGGCTCGAATTCGCTGG
AGGAAATGATCTTGGCGAAACGTCGAAGGAGAGTGTGTTTAGTGTCTAAG
AAACTTGCGGAAAATGATGGGTGCCTGTCGTTCCGCAGGAGCTTCGTATG
GCGAGGGACTTCCTCACGAACAAAGGCTGGCAGATCGACGAAGAAATAGA
CCTGTCAGTGGCGGCTTGTGTAAACAACCCGGCACATCCAACTGAAGCCT
GGCCCACCGAAACTGGATCGACGTCCCTCCAGGTATGGAGGTGAGAAGCC
ACAGGAGACTGAGTAACGTTTCCTTATGTGGCAAACACCGGGGGGGGGGG
GGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTACAACGTCGTTGCCAAGCGACGAAAACCCAACCCCGATGG
CAAACACCGGGGGGGGCTTATGACTTAATTTATGTTCTGGTGCTTTCATT
TCCTGAAATAGTTATAAGCATTGTGATTGTGCAACTGCCTCGAGGGTGCG
TGACCATTTTAACACAACGTGGTGCGATCATCCCCCTTGCGCGGAGCGAG
GGTTCTCCACCCCGCACAACATGATCTACTCGACCACCATTATGGTTACC
GCCAAAAAAAAAAACCGGAGGTAAAAAAAAAACGGTAACCTGGTTGCCGA
GTTCACGAAGTGAATTGGCTTGTTTTACAACGTCGTTGCCAAGCGACGAA
AACCCAACCCCGATGGCAAACACCGGGGGGGGCGGAGGGAAGGGGGGTCG
AATGCTCAGTCCCTTGCGTTTTTTGCTCACTTTTATCGTCGTGCGGCATT
ATCTCCCTGAGAAACCTTCCTGTACCCGTTCCTACCCTACACCGCTTAGC
ACACTAGCTGTCGCTGTTGCTCTGCTGTTTCTTGGTCAGGGCAAACGATT
TCCTGGAGTTTTGCATGGACCGCTTCGTGCTGCCTTCGGCCCATGACGCC
GGCCCTTTCCCCGGCAAAGGCCTGGTCCTAGACTTGGGCTGTGGCAGCGG
CCGTGACACTGTCTACATGGCGCAGCGCCTGCCTCCTGGCACCCGCGTAG
TCGGTGTCGACAACCACTCGTACGCTCTGGAAAGGGGCGCGAGGCTGGCC
GAACGGTGGCTGGAAGACACGTCTTCGGGAAAAGTTGTTGGTGGCAGTGG
TAATGGTGGCGGCAGCGAAGAAGGCGCGACGCGATCGCAACGAGAAACCC
AGACCGGCTGTTTGGGAGGGGTCAGAAGTCGGGCTGGCGGACGGAGCGAT
ACCGACGGCAGAGAAGGGACAACGCAGGGACAACCCCCGGAAGTGCGGCA
AAGGGCGTGCGAGTGGTCGCTCACCGACCTCAGGAAAGAGGGTTCGCTTG
ACGCAATGCGGGCTTCCATTGTCCACGGGCACCGGTTCAAGTGCGAGCGT
CTGTTACCTCTACTTCGAGATCATGTGAGGAACACGTGGGACACACACTG
GCCCTTTGCCTCGCTAGCTTTTCCATGTGCGGCCCACACACTGGTGAAAA
GCTTGGGGTCCCAGGACTGGAGCTAAAGTATGTCCTGGTACTGCTTTTTG
TCGCGTCCTATGTCGAGCTCGTATCATGTCGTTGGATGTCATGCACTTCT
AGTTTCCCGTTTACGGCAAACCTAACGTCCATGCACTCGTGTTCAGCTAG
CCCGTTCGCCCGTTCATACGTTTGTCTCCGCGCTTGCTGTACATAGGTGC
TGCTCCCAGGGGGCTATTTCATCTGGTCTACGTTTTTGGACACGGGATCG
GAGAATTTAGTGCCGCCATGGCGACCGAGTCGCATGATGAGGTAGTTGCA
ACCCGCGCGTTATTCGACCAAAAGCGTCGTGTCTCGTGGTTATTGGTCGA
ATCGGCTCTGGGTTTTGCCTCAACCGGCTTGTCCGTCTTCGGGCTTCGAT
ATACGAACCACGGCTGTTTTGACGGCGTTGTGGGTCCTGCCGGAAAGGAG
GTCCTCTCCTGTTCGCCTTTTTGCATCGTCCGGATCGTTCTCTAAGGTTT
CGTGGTTCACAGATTTCACAAAGAATAATACCCGTTTATGGAGCAAAGCG
TTTGCAGTCAGCTATTGTAGACTGCTGTGGACGCTTGGGCAAAGACAGCC
ACGCAAGCACACCACCCGCACCTATCGTTCAGGGTGAGAAATCGACTATC
TCTTCTTGTTCTATTTCGCCATATCTGTCCCCTGCCTGCGCAACTTCACC
GTTTGCTTATGCGCACCACCAAACTCTTTGCTGGACCCGGTTTCTCGTCA
AGACCCGGCGAGCTGGCGGACATCTTCTCTGGCGATGGGTTTGAGATCCT
GGTGGACGAACAAGGGGAATTACCCACGCGGGGCTCGACGGTGCCAGCGA
ATTTCTTCATCTGTCGAAAACTACCGACGACATGCACAATGAAATGATGC
TGCTGCTGTCTCAAGTTGGTGTTATCCGTGGCATTGCAGAGAGGTGTTGT
ACAAATTGTTTAACGTTATGTACTGAGGTGCTGCATTCGAACTACATGCC
AGTGTTGCAGACCTCCGTCGTATGTGAGGCTTTTTTGATGCAGCGGTTGC
AAAGTTATCGTTTGCTTTTGGGGGCATTTCGTCTTTTTTTTTTTCCGCTT
AGTCCGCTTGCCGCTCGTCCTTTTATGTCGAGGGTGAGTAGAGTATGCGC
TGGATGTGTGCGCACAACGCGGTGTAACCGTGTGCGGCATCGCCCGCGTT
TCAGGATGTGTATGGATGGAGAAAAGGATGAACGCGTGTGAGACCGCTTC
TCGTGCAGTTATTATCGGAATTACGCTGCGAGCGCTTCTTCCATACCGCC
CCGCGTAAGTTGGTCAGCCGTGTTAGGTACTGCATAACCGCTGTAAAGTA
CTGTATGGCCATGGGACCAGCAATTGGAAGCGTTTTTCCAAGGAGGATAA
TTCGATATGGC back to topCoding sequence (CDS) from alignment at Scaffold_301:61532..66442+ >EsuBft971_8a-0001 ID=EsuBft971_8a-0001|Name=EsuBft971_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1464bp|location=Sequence derived from alignment at Scaffold_301:61532..66442+ (Ectocarpus subulatus male Bft15b) ATGGGTGCGGCAAGGAGCGCGCCGACGCTGCTGCACTGGTGCCTCTCGCT CCTCCTGCAACTTCTTCTGCAGATGCAAATGGGCATGGTATGTGGCTTTT TGGTTCCTTCGCAGCCAAGAGGAATGCCAAGCATTGAAAAGAGCAACATT ATCCGGCCGCCCCCCACCGCCGCCACCTCGTACACAACCGTAGCCGCAGC GTCCAGAGCCGGAGCTGGGGCGACGAGCTTCACCATGGCGAGCGTAGCGG GAACAGCAGTAGGCGAGTCGACTACGTCTCAGACGCGGACAGTACCATCC GTCGGAGCAGCAGGAGCGAGTCCTGATCCTTTCGCGAAGCCATCAGAGTT CCAGGAGTATGTGGGGCGGCGCAAGTCGGGCTCCCGCAGGGTGGTGCTCG ACCTTCGGCCTAGGGCGGACTTTCGTCGGGAGCACCTCGAGGGATCAACG TCCATCCCCATCGACGAGCTGGAGCCCAGGCTCTTGGAGTTGCCCCCTCC CTTCGCACAGCCCGTGAACATTGTCGGCAGCCAACAGGAGCTTCGTATGG CGAGGGACTTCCTCACGAACAAAGGCTGGCAGATCGACGAAGAAATAGAC CTGTCAGTGGCGGCTTGTGTAAACAACCCGGCACATCCAACTGAAGCCTG GCCCACCGAAACTGGATCGACGTCCCTCCAGGTATGGAGGGCAAACGATT TCCTGGAGTTTTGCATGGACCGCTTCGTGCTGCCTTCGGCCCATGACGCC GGCCCTTTCCCCGGCAAAGGCCTGGTCCTAGACTTGGGCTGTGGCAGCGG CCGTGACACTGTCTACATGGCGCAGCGCCTGCCTCCTGGCACCCGCGTAG TCGGTGTCGACAACCACTCGTACGCTCTGGAAAGGGGCGCGAGGCTGGCC GAACGGTGGCTGGAAGACACGTCTTCGGGAAAAGTTGTTGGTGGCAGTGG TAATGGTGGCGGCAGCGAAGAAGGCGCGACGCGATCGCAACGAGAAACCC AGACCGGCTGTTTGGGAGGGGTCAGAAGTCGGGCTGGCGGACGGAGCGAT ACCGACGGCAGAGAAGGGACAACGCAGGGACAACCCCCGGAAGTGCGGCA AAGGGCGTGCGAGTGGTCGCTCACCGACCTCAGGAAAGAGGGTTCGCTTG ACGCAATGCGGGCTTCCATTGTCCACGGGCACCGGTTCAAGTGCGAGCGT CTGTTACCTCTACTTCGAGATCATGTGCTGCTCCCAGGGGGCTATTTCAT CTGGTCTACGTTTTTGGACACGGGATCGGAGAATTTAGTGCCGCCATGGC GACCGAGTCGCATGATGAGACCCGGCGAGCTGGCGGACATCTTCTCTGGC GATGGGTTTGAGATCCTGGTGGACGAACAAGGGGAATTACCCACGCGGGG CTCGACGGTGCCAGCGAATTTCTTCATCTGTCGAAAACTACCGACGACAT GCACAATGAAATGA back to top
|