EsuBft969_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft969_4a-0001
Unique NameEsuBft969_4a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_565contigScaffold_565:245074..248634 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LSL3
ProteomeIdEsuBft969_4
Protein domainsPF13238
Protein domainsIPR027417
Protein domainsPTHR10285
Ownerapollo_admin@sb-roscoff.fr
Noteuridine kinase os:schizosaccharomyces pombe (strain 972 atcc 24843) gn: pe:3 sv:1 [Automatic annotation]
Nb exon5
Max annot lvl2759|Eukaryota
Length1404
Hectar predicted targeting categoryother localisation
Evalue4.62e-143
EggNOG OGsCOG1072@1|root,KOG3201@1|root,KOG2702@2759|Eukaryota,KOG3201@2759|Eukaryota
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-09_002060.1
Date last modified2016-06-14
Date creation2016-06-14
Preferred nameCAMKMT
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K18826,ko:K21804
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,map00310
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006417,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008277,GO:0008757,GO:0009889,GO:0009966,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0010646,GO:0016043,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018025,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0022400,GO:0023051,GO:0031072,GO:0031323,GO:0031326,GO:0032101,GO:0032259,GO:0032268,GO:0032991,GO:0034248,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0140096,GO:1901564,GO:2000112
EC2.1.1.60
Descriptioncalmodulin-lysine N-methyltransferase activity
COG categoryF
BRITEko00000,ko00001,ko01000,ko03110
Cross References
External references for this mRNA
DatabaseAccession
GO0003824
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft969_4aEsuBft969_4aEctocarpus subulatus male Bft15bgeneScaffold_565 245074..248634 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft969_4a-0001EsuBft969_4Ectocarpus subulatus male Bft15bpolypeptideScaffold_565 245302..248634 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft969_4a-0001-exonagat-exon-72363Ectocarpus subulatus male Bft15bexonScaffold_565 245074..245443 -
EsuBft969_4a-0001-exonagat-exon-72362Ectocarpus subulatus male Bft15bexonScaffold_565 245814..245950 -
EsuBft969_4a-0001-exonagat-exon-72365Ectocarpus subulatus male Bft15bexonScaffold_565 246279..246453 -
EsuBft969_4a-0001-exonEsuBft969_4a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_565 247428..247504 -
EsuBft969_4a-0001-exonagat-exon-72364Ectocarpus subulatus male Bft15bexonScaffold_565 247990..248634 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft969_4a-0001-exonagat-three_prime_utr-23615Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_565 245074..245301 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft969_4a-0001-cdsEsuBft969_4a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_565 245302..245443 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft969_4a-0001 ID=EsuBft969_4a-0001|Name=EsuBft969_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1404bp|location=Sequence derived from alignment at Scaffold_565:245074..248634- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAGAACCGGAAGCAAGCGCCGGCCACCCGTCGTGGACCTCCTGGTC
AGGTTATGCCTCGTCCAAAACAGCTCGCACGGATGGCACCACCATCATGG
GTGGTGGAAAAGATGCTGAGGCGGTAGGTGAGCGCGATAGCGTTGATGGC
GGTGGCGCGGAAGGCGGCGGTGGTGGTAGCGACTACGGTGGCGGTGTTCG
GGTGGCGCCCGAGCTCCCGCCGGGGACGCTCCCTCTGCGCTCGGAGGCAC
CGCTCCCGTCCGCCGCGCCGTTGCTGCCGTCGAGCACCCCCCCTGCGGCG
GCGACAGCGATGGTGGCGGTGGCGACGGCACCAGCAGACCAGCAGCAGCA
ACAGCAGCAGCAAGGAAAGCAGCAGCGGCCAGACCGTCGAATGGTTGACG
TGTACGAGGCGCTTGCCCAGCGCATCAGACTCGAGGTCCGAGAGCGGCGA
AGGAGGCAGGCCACGGCGGCGGCCGGGCCGGAGACAGGCGCTTTCGGACA
CACCGCGGGGCCAGGGGCTGGGGTTCGTGTAGGAGAGGATGGGCATGCGG
CGGTGGAAGGAGTTAAGCACAAGCAGCAGCAGAAGCAGCAGCAGTTGTGG
GTGGCCGTTGCCGGGGCTCCAGGATCGGGGAAGACAACTCTAGCGGCGGA
GGTGTGCCAGCGCGTGCAGTCCGAGGAGATATCGGCGATCTGCCTGCCAA
TGGACGGCTACCACCTCTACAGGCGGGAGCTAGACCTGCTGCCAGACCCG
CGGGAGGCTCACCGGCGGCGGGGGGCCCACTGGACGTTCGACGGAAGGCG
CTTCCTGTCGGAGCTCGGGGACGCCCGGAGGAGCGGGAGTGGGAGCTTTC
CCGGGTTCGACCACGCCAGGGGAGATCCGGTGGAGAACCAGTGGGTGGTG
CAGCCCTCTCACTCAGTCGTCATAGTGGAGGGAAACTACCTGTTGCTCAA
GGGGGTAGATCCCTGGGACCAAGTGGGAGGTCTGTTCGACGTCACGTGGG
CCATTCGATGCCCTCCAGAAGTCTGCGGAGAAAGGGTAAGAAGAAGGCAC
ATGTCCACAGGTCTGGGGGAGGAGGAGGCTTGTGCCAGGGTCGAGGGAAA
CGATCTGCCTAACGCTAGGCTTGTATCCGAGAAGTGTCCTTGGAGCGAGG
TCGACGTCGTAATCGACAGCCTCTAGAGGTTATCGCGATGCCTGATCATC
AGTAACATGTGGTTGTTTTCGTTTTGACCAAGAGTCTTGCGGTGTGTATT
CATGCTCCTGCAGACGGAGCATGTCGAACAGGAGGTTTGGCTGCGAGACA
AGTTTGCTTTCGTCACAAGCCAGCGGCATCACCACAAAGTTATCGCTCTT
GGAAGGAATAAGGTGTCATGTGACCTGCCTTGGCGTGGGTAAACTGAGCC
GCCC
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protein sequence of EsuBft969_4a-0001

>EsuBft969_4 ID=EsuBft969_4|Name=EsuBft969_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=391bp
MQEPEASAGHPSWTSWSGYASSKTARTDGTTIMGGGKDAEAVGERDSVDG
GGAEGGGGGSDYGGGVRVAPELPPGTLPLRSEAPLPSAAPLLPSSTPPAA
ATAMVAVATAPADQQQQQQQQGKQQRPDRRMVDVYEALAQRIRLEVRERR
RRQATAAAGPETGAFGHTAGPGAGVRVGEDGHAAVEGVKHKQQQKQQQLW
VAVAGAPGSGKTTLAAEVCQRVQSEEISAICLPMDGYHLYRRELDLLPDP
REAHRRRGAHWTFDGRRFLSELGDARRSGSGSFPGFDHARGDPVENQWVV
QPSHSVVIVEGNYLLLKGVDPWDQVGGLFDVTWAIRCPPEVCGERVRRRH
MSTGLGEEEACARVEGNDLPNARLVSEKCPWSEVDVVIDSL
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mRNA from alignment at Scaffold_565:245074..248634-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft969_4a-0001 ID=EsuBft969_4a-0001|Name=EsuBft969_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3561bp|location=Sequence derived from alignment at Scaffold_565:245074..248634- (Ectocarpus subulatus male Bft15b)
ATGCAAGAACCGGAAGCAAGCGCCGGCCACCCGTCGTGGACCTCCTGGTC
AGGTTATGCCTCGTCCAAAACAGCTCGCACGGATGGCACCACCATCATGG
GTGGTGGAAAAGATGCTGAGGCGGTAGGTGAGCGCGATAGCGTTGATGGC
GGTGGCGCGGAAGGCGGCGGTGGTGGTAGCGACTACGGTGGCGGTGTTCG
GGTGGCGCCCGAGCTCCCGCCGGGGACGCTCCCTCTGCGCTCGGAGGCAC
CGCTCCCGTCCGCCGCGCCGTTGCTGCCGTCGAGCACCCCCCCTGCGGCG
GCGACAGCGATGGTGGCGGTGGCGACGGCACCAGCAGACCAGCAGCAGCA
ACAGCAGCAGCAAGGAAAGCAGCAGCGGCCAGACCGTCGAATGGTTGACG
TGTACGAGGCGCTTGCCCAGCGCATCAGACTCGAGGTCCGAGAGCGGCGA
AGGAGGCAGGCCACGGCGGCGGCCGGGCCGGAGACAGGCGCTTTCGGACA
CACCGCGGGGCCAGGGGCTGGGGTTCGTGTAGGAGAGGATGGGCATGCGG
CGGTGGAAGGAGTTAAGCACAAGCAGCAGCAGAAGCAGCAGCAGTTGTGG
GTGGCCGTTGCCGGGGCTCCAGGATCGGGGAAGACAACTCTAGCGGTAAG
TAAGAACAACGTGTAGCTTTGTAATCTTGCAGTAACTCTGCTTGCTCGTT
TTTCGTCGGACGTACGGAGCAGACATGGGTACTTGCGGTGGTTTTATGTG
CCTGACGTGTAGTGAACTGCCAGCTGTGATGATCCCTTTCCTCACTTGCC
GTCAGACATTATTCTACGTCGCGTTCGTGGAAGGGCCCCTCAGTCTCTAC
GCTCATAAGATGCAAGTGTTCTTCTTGCTTCTCGATGTGGGTTGTACTTT
GGGCTCGCTTTTGGCTGAACGAAATAATTCAATAGCGTATGATAACTCCT
CTTTGCCATAGTTCTCTCTCTTGTCGTGGTTGTTGGATGTTGTCTCTTGT
TATGGCCACTGGTACTGCTGTCGCTCCTCCCGTGTCCAGCAGCCCCTTCC
TTTCTCGACCTTGGCTATCTGTTTTCACATCGTCTCCCCACCTCCCGGGG
GTGCTTTCTGACTCCCCAATGCCACCGAAGGCGGAGGTGTGCCAGCGCGT
GCAGTCCGAGGAGATATCGGCGATCTGCCTGCCAATGGACGGCTACCACC
TCTACAGGTCAGAAGCCTAATCAAACCGTCGAATGTTCCCACAACCTATA
GTATTTGGGACGTTTCAGTGAGCTCGTTTTCTTGGAGAGCGTGTTTTTTC
GTTGTGAGGAACAATAAGGCCGTTGAATTCAGAGGGCGGCGAACGTGATT
CGGCAACGCATGGAGTTTCGATGCCCATTGAAACTCGTGCGGGCCATGAC
TTGTTGTGTGCTCACCGCTCGACCCCCGTGTGCTTTGACTTGCACATAAC
CCCGACGGTACACACGGTCCCGGAGAGGCTCGGTCCTATGATATCATGGG
CGTTTTTGGCTCTCGGAAACGGGCACAGAGGGATACACACGTGCACGTTT
TCCTCAAATGTATATGATCCTGCCATAGTACTACCGTTGGGACTTGACGT
ATTTGCGTCTAGTGAGAGAAGTGGGCCTGGAAGCCGATGAAGAACTGCCG
TCTTTTGACACGCCAAGGGTTCGGGAAACTTTGCTTGAACATGAACACCC
ACATCCCGCCCGTGTCTTCGATCTCCCGTTCCCCCTAAATTCCCCCTTTC
TGCTGTCCAGGGACAAATCCAATATTCTCAACGCCAAAAAAGATAAACCC
CCCTCCGGCCCTTACCCCCGGCCTGGGCGGGCGAAAACACGGCACATCTG
TCCGTCCCGGCATTGTTAACAGGAGAGGCCAATGATCAAACGACGACGAA
ACGCGTTTACATTAGTACACCCACCCCTTCCCCTCCAGTGTGAACGCTCA
TTCACTCTGTAGCCGCACGAGAAGATCTCTCTCTCTCGCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTNNNNNNNNNNNNNNNN
NNNTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCCTCTC
TCCGCTCTCTATTCGACCTCGCGCATCATATCATTCCATGATTCACTTCC
ACAGTCTACTACGATGAAATCTGCGAGACAGGCGGGAGCTAGACCTGCTG
CCAGACCCGCGGGAGGCTCACCGGCGGCGGGGGGCCCACTGGACGTTCGA
CGGAAGGCGCTTCCTGTCGGAGCTCGGGGACGCCCGGAGGAGCGGGAGTG
GGAGCTTTCCCGGGTTCGACCACGCCAGGGGAGATCCGGTGGAGAACCAG
TGGGTGGTGAGCGGCTGCCGGTGTTGAGGTTGTTGGCTTTCATCGGATGG
GTGCGTTGTGTATGTGCAGGGCCGTGGTGATTGGTAGAAGGAGTTCCGTG
GGGGGTAGCAGATTCCTCGAGAAGCGTACAGCGACGATGACCAGGCAGGT
CACTAATGAAGGAATTATTTTGGTTTCATTCGCAGTACAGCCGTGAGGTG
TTTTTTTTTCGCGTGGGCAACGCCTTGTGTTGTTGGTTTCCCAACAAATG
GTCAGCATACGGCCACTAATAATCGTCAATGCTGGCATCAATTCCTTATG
TTCCGTTTGGTGTCGTCCCGAATCACACGAACAGGTGCAGCCCTCTCACT
CAGTCGTCATAGTGGAGGGAAACTACCTGTTGCTCAAGGGGGTAGATCCC
TGGGACCAAGTGGGAGGTCTGTTCGACGTCACGTGGGCCATTCGATGCCC
TCCAGAAGTCTGCGGAGAAAGGTAAGCCTGCTTATTGCCGATTTCAAGAG
GGTGGTTGAGCTGCAAGAATTATTACATGTATCAATATCGAACGTCACCC
GCAGTTCAAACCGCCCCCTTCCGCATACGACGTAATTCACAGGGAATATT
GAACCTCTTTTGGGGAGGATATCTCCGAGTCCGCGTGGTGGAATTTACTG
CTCTATCGTTAAAGTCTTACGTCACTATTGGTCCGATTCGGTTGCGTTTG
CAATTCCATAACTTTGTGTGCCGAAAGATCGCCGGCGTTCCTTGGCCTAC
GAGAACAAACTTGCGTAGCGACCAACGACCTAGGTCGTTCAACAAACGTC
CCCCCCATTCGGACGCTGCCCTACCTTCCGTCATCATCAAGGGTAAGAAG
AAGGCACATGTCCACAGGTCTGGGGGAGGAGGAGGCTTGTGCCAGGGTCG
AGGGAAACGATCTGCCTAACGCTAGGCTTGTATCCGAGAAGTGTCCTTGG
AGCGAGGTCGACGTCGTAATCGACAGCCTCTAGAGGTTATCGCGATGCCT
GATCATCAGTAACATGTGGTTGTTTTCGTTTTGACCAAGAGTCTTGCGGT
GTGTATTCATGCTCCTGCAGACGGAGCATGTCGAACAGGAGGTTTGGCTG
CGAGACAAGTTTGCTTTCGTCACAAGCCAGCGGCATCACCACAAAGTTAT
CGCTCTTGGAAGGAATAAGGTGTCATGTGACCTGCCTTGGCGTGGGTAAA
CTGAGCCGCCC
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Coding sequence (CDS) from alignment at Scaffold_565:245074..248634-

>EsuBft969_4a-0001 ID=EsuBft969_4a-0001|Name=EsuBft969_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1176bp|location=Sequence derived from alignment at Scaffold_565:245074..248634- (Ectocarpus subulatus male Bft15b)
ATGCAAGAACCGGAAGCAAGCGCCGGCCACCCGTCGTGGACCTCCTGGTC
AGGTTATGCCTCGTCCAAAACAGCTCGCACGGATGGCACCACCATCATGG
GTGGTGGAAAAGATGCTGAGGCGGTAGGTGAGCGCGATAGCGTTGATGGC
GGTGGCGCGGAAGGCGGCGGTGGTGGTAGCGACTACGGTGGCGGTGTTCG
GGTGGCGCCCGAGCTCCCGCCGGGGACGCTCCCTCTGCGCTCGGAGGCAC
CGCTCCCGTCCGCCGCGCCGTTGCTGCCGTCGAGCACCCCCCCTGCGGCG
GCGACAGCGATGGTGGCGGTGGCGACGGCACCAGCAGACCAGCAGCAGCA
ACAGCAGCAGCAAGGAAAGCAGCAGCGGCCAGACCGTCGAATGGTTGACG
TGTACGAGGCGCTTGCCCAGCGCATCAGACTCGAGGTCCGAGAGCGGCGA
AGGAGGCAGGCCACGGCGGCGGCCGGGCCGGAGACAGGCGCTTTCGGACA
CACCGCGGGGCCAGGGGCTGGGGTTCGTGTAGGAGAGGATGGGCATGCGG
CGGTGGAAGGAGTTAAGCACAAGCAGCAGCAGAAGCAGCAGCAGTTGTGG
GTGGCCGTTGCCGGGGCTCCAGGATCGGGGAAGACAACTCTAGCGGCGGA
GGTGTGCCAGCGCGTGCAGTCCGAGGAGATATCGGCGATCTGCCTGCCAA
TGGACGGCTACCACCTCTACAGGCGGGAGCTAGACCTGCTGCCAGACCCG
CGGGAGGCTCACCGGCGGCGGGGGGCCCACTGGACGTTCGACGGAAGGCG
CTTCCTGTCGGAGCTCGGGGACGCCCGGAGGAGCGGGAGTGGGAGCTTTC
CCGGGTTCGACCACGCCAGGGGAGATCCGGTGGAGAACCAGTGGGTGGTG
CAGCCCTCTCACTCAGTCGTCATAGTGGAGGGAAACTACCTGTTGCTCAA
GGGGGTAGATCCCTGGGACCAAGTGGGAGGTCTGTTCGACGTCACGTGGG
CCATTCGATGCCCTCCAGAAGTCTGCGGAGAAAGGGTAAGAAGAAGGCAC
ATGTCCACAGGTCTGGGGGAGGAGGAGGCTTGTGCCAGGGTCGAGGGAAA
CGATCTGCCTAACGCTAGGCTTGTATCCGAGAAGTGTCCTTGGAGCGAGG
TCGACGTCGTAATCGACAGCCTCTAG
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