EsuBft968_17a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft968_17a-0001
Unique NameEsuBft968_17a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_618contigScaffold_618:683604..695497 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog118161.KB235922_gene558
ProteomeIdEsuBft968_17
Protein domainsIPR011047
Protein domainsCYTOPLASMIC_DOMAIN
Protein domainsSignalP-noTM
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsSIGNAL_PEPTIDE_C_REGION
Protein domainsSIGNAL_PEPTIDE
Protein domainsSIGNAL_PEPTIDE_N_REGION
Protein domainsTMhelix
Protein domainsSIGNAL_PEPTIDE_H_REGION
Protein domainsTRANSMEMBRANE
Ownerapollo_admin@sb-roscoff.fr
Nb exon12
Max annot lvl1117|Cyanobacteria
Length312
Hectar predicted targeting categorysignal peptide
Evalue7.99e-05
EggNOG OGsCOG1520@1|root,COG1520@2|Bacteria,1G342@1117|Cyanobacteria,3VNN2@52604|Pleurocapsales
Ec32 ortholog descriptionQuinonprotein alcohol dehydrogenase-like superfamily
Ec32 orthologEc-05_002240.1
Date last modified2016-06-13
Date creation2016-06-13
DescriptionBeta-propeller repeat
COG categoryV
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft968_17aEsuBft968_17aEctocarpus subulatus male Bft15bgeneScaffold_618 683604..695497 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft968_17a-0001-exonagat-exon-10910Ectocarpus subulatus male Bft15bexonScaffold_618 683604..683895 +
EsuBft968_17a-0001-exonagat-exon-10916Ectocarpus subulatus male Bft15bexonScaffold_618 686027..686112 +
EsuBft968_17a-0001-exonagat-exon-10911Ectocarpus subulatus male Bft15bexonScaffold_618 686835..687026 +
EsuBft968_17a-0001-exonagat-exon-10907Ectocarpus subulatus male Bft15bexonScaffold_618 687753..687844 +
EsuBft968_17a-0001-exonagat-exon-10906Ectocarpus subulatus male Bft15bexonScaffold_618 688201..688267 +
EsuBft968_17a-0001-exonagat-exon-10915Ectocarpus subulatus male Bft15bexonScaffold_618 688872..689042 +
EsuBft968_17a-0001-exonagat-exon-10912Ectocarpus subulatus male Bft15bexonScaffold_618 689931..690031 +
EsuBft968_17a-0001-exonagat-exon-10914Ectocarpus subulatus male Bft15bexonScaffold_618 690491..690587 +
EsuBft968_17a-0001-exonagat-exon-10908Ectocarpus subulatus male Bft15bexonScaffold_618 691554..691753 +
EsuBft968_17a-0001-exonEsuBft968_17a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_618 692240..692447 +
EsuBft968_17a-0001-exonagat-exon-10913Ectocarpus subulatus male Bft15bexonScaffold_618 693386..693552 +
EsuBft968_17a-0001-exonagat-exon-10909Ectocarpus subulatus male Bft15bexonScaffold_618 694042..695497 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft968_17a-0001-exonagat-five_prime_utr-15356Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_618 683604..683731 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft968_17a-0001-cdsEsuBft968_17a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_618 683732..683895 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft968_17a-0001-exonagat-three_prime_utr-23598Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_618 694075..695497 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft968_17a-0001EsuBft968_17Ectocarpus subulatus male Bft15bpolypeptideScaffold_618 683732..694074 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft968_17a-0001 ID=EsuBft968_17a-0001|Name=EsuBft968_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3129bp|location=Sequence derived from alignment at Scaffold_618:683604..695497+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CCTCTTTTCCCACAATCGAGCCTCCGACGCACCCGCCGTCAACGCACTCA
AAGGCTACGGCAGGTTTAGTCACACCCGCACACACAGCAGAGGCACTACG
AGGAAGGGAAAGACGGACGCAGGCGGCCATGCGTGTCGCTCCATGGCTCG
CGGCGGCGGTGTGGTCGTCGCTGTTCTTGGCGAGGCTGGAGGAGGTCCGG
GCACAGGACGACTCCGTGGAGGAGGCGGGAGACGATGCCCAGGTGGTATC
TGCATTTGCCCAAGGCGGCACTTCCAACGTGGCCGATGACTACGCTGTGT
CGGGGTTCTGGTTTGAGGATACCGCGCAGCTGGTCGTGGCAGTAAACACC
GGCAATGAACTATCAGGCGGGAGTAACGCCGGCGGCACCGACTTCGTCGT
CATCAGATTCGACAGCGACCTCGAGGTGGTAGATTCCGCCCAGTTTGGGG
GCGATGGGGACGACACCATAACCTCCATGGCGGTTGACGAGGTGAATCAG
AGCGGCAGCATCATCATCGTGGGGTCGACCGCCTCCGATGACGAGCACCT
CTTCGGTCTCGACACCGCACCCCGGGAGCAGGACTATTTCATCGCCGCGT
TGAGCAGCGACGACCTTGAGGTCACCAAGCAGTTCGTCAACGGTTCCCAA
TACAACAACGAGGAATTGACAGTCGTCGGCGTGGAGCCGGTCGACGAGGG
CAGCTACTTCGCGGCGGGTTGGGCAGCAAGCGAAGACGGACAGGACTGGT
TCGCGCTCAAGATAAACCATGACATGGATGACATACTTTGGAACAAGTCT
TTCGAGACCACGGCGGTGTCCGACCTGCCCACCGCGATGGTGGTGGGCGA
GGAGGCCGTGTATGTGGTGGGGTATTCCGCCGACTTCGAGGGGGATCTCG
ACGACGACGAGGTGGAAGAAGTTTCGTCGCTGTTCGTGTATGCCCTTGAC
ATGGACGACGGCAGCACACTCTGGGAGTTGACCACCCAGTTGGGGTCCTT
GGCGGACGGGTCTCAAGCTCATGGCGCTGTGCTCAGCGGGAGCGAGCTTT
ACATCGCGGGACACACTAGCGGGATCATCCCTGACTACGACGGCGACAGC
ACGGATACCGACGAGCTGTTTGTGGTGGCCATCGACATCGACTCGGAGGA
GGTTAGCTGGGTCTGGCAGAGCGAGGCCAACGCGACGGCCTTTGGCACGG
CGGGGATCGTTCTGGCCGATGACGGTAGCCCCATCGTTGGCGGCATCGCG
TTCGGGGACCAGTTTAACCTCACCTCCGCGTCTTTCACGTACTGGGAGTT
CGGCTCCGGTGACTTCGTCGCCGCTAAGCTCGACATCGAAGACCCGGATG
ACATCGAAGTGTCCAAGTATTTCGTGGCTGCGGCCGCCAGCAACGAGACG
CGAGAACAGCCATTCTCCATCATCAAGGACACGGACACCGTCGACGGGGT
TTTCCTGATCGGCCAACAGGACGGCGTTTTCGACGAGGGGGACTCTGAGG
GTGGCGACCCGCTCAACTACCTGGTGTTGAAGGTTGAGCTGGAGGTGTTG
CCTGAGGCAGAGGAGGAGGAGGAGGAAGGGAGGGATTTCCCGTACTGGTA
CATCGAGGTCCCGCTGTTTGCTGGCGGGATTGCCCTCTTCGCGGTGGCCT
ACAAGTGGGCGGCAGCATCACAGGCGGCGAAGGCGAAGCGAGCAACGATG
GTGTAGGTAGACCCAGAGGAACTCCGTGCGGCGGGGCTAGGGGATGGAAA
ATATTCGTCGCCTCTCTTTGTGGCCAACGCCTCCTGAAGACCAGGAGATG
GCAGGCAAAAAGGAACAAATTGCCTCTACAAAAATACTGCTGTCATTCGC
GCGTCTCATCTTGTAGTGGGCGCGCGTGGTCGGAGCAAGTGTCGTCGGAG
GTGTTGTCGGTTGTGTGTATCGTGTGGTTGTTGTAATTCTCGTGGTCCCG
AATAGTTGGACGTCCTGTGGTGTATGCGTTACGTCGTTTTGTCTCTTGGA
TTTGGACGTGCTTTCTTCACCTTTCGACGTTCCTGCTTCTTTCTCTTGGA
GAGTTTTCTACGTTCGCGATCTACCTGCTGTTGTTGGGTATGTAGCATCG
GCGAGCTTGTGCAAGGCAGGTGGCCCGACTCTCCCCCTTGTGTGTGTAGT
TGTCTTCGTTAGCGGTGTTGTTTGTAGCACAAGAGGTACGTGTTGCTCAA
TAGCTAGGGCTTTGGAGTCTGGTAAGGGAAGCAGAGGGAGGGGGGGGCAC
GCAGACGGGGGAATTGGGGAGGACGAGTCCGTGCAACTGCTGTGTGTGGT
GAATCACGTATTTTCCATCCGGTGGCTTCAATCTGCCCACGGGGTGTCAA
TTGTGTGTTTGTTTCGGTTCCTGATGGATGCCACCCGTCTGTAGCGGCCG
TAGTTTTTTTTATTGGGGGGGGGGGGGGGCTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCTATCTACCTCTTGTGAGTCAGGCGCTACGTCGGG
TTTCTTTCTGTCCAGCAACATCATTTCTGTTTCGTGTTCGGCTATAGCTA
CAACTACGCGTGTATCTTGTTTTTTCATGCCATTAGTGGCTTTTTCGAAG
CTGTCCTGCGTGGGTTGGCGGTGTTGTCGTGGTCTGCGGCCACGCCTCGA
AGTGTATGGTTTGGCCATTACAGCAGTGTTTGGTTGGGTCCACCCTGTTT
TGGAATCGAACATAAGACTAGGGGAGGGAGGGGGGGGCACGCGGGTATTG
CCGGATAGATTATCACCATTTCAGGGTACACTTGGAAATCAAGACGACAC
CAATCTCTGACAGCATCCGCCGTAGATCGCGGCGAAACCAATAAACAGCT
GTCTGTGTCCTGTGTGTCCTGTGCCTCGGAAGCATGTTGCACGAGGCAGG
TCGTGCCCTTTTTTCTCTCTCTCTGTGCCTCTCTCTCTGTCCTTTTACTG
ATCAGTACCACACCGAAGTACTCGCGCATCAAGCGAGTCCGACCCTCTGT
TGAGAAGGGCCGGTATCCTATGGCCCATGAACGATGAACGAGCGAGCGTT
GTTGGTGGTTTGGTTGTGGTTATGTATGTGCGGTACACGTTTTTTTCTGC
GGGTTTGATGCTAGAGCGTCGGGCGCCGG
back to top

protein sequence of EsuBft968_17a-0001

>EsuBft968_17 ID=EsuBft968_17|Name=EsuBft968_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=525bp
MRVAPWLAAAVWSSLFLARLEEVRAQDDSVEEAGDDAQVVSAFAQGGTSN
VADDYAVSGFWFEDTAQLVVAVNTGNELSGGSNAGGTDFVVIRFDSDLEV
VDSAQFGGDGDDTITSMAVDEVNQSGSIIIVGSTASDDEHLFGLDTAPRE
QDYFIAALSSDDLEVTKQFVNGSQYNNEELTVVGVEPVDEGSYFAAGWAA
SEDGQDWFALKINHDMDDILWNKSFETTAVSDLPTAMVVGEEAVYVVGYS
ADFEGDLDDDEVEEVSSLFVYALDMDDGSTLWELTTQLGSLADGSQAHGA
VLSGSELYIAGHTSGIIPDYDGDSTDTDELFVVAIDIDSEEVSWVWQSEA
NATAFGTAGIVLADDGSPIVGGIAFGDQFNLTSASFTYWEFGSGDFVAAK
LDIEDPDDIEVSKYFVAAAASNETREQPFSIIKDTDTVDGVFLIGQQDGV
FDEGDSEGGDPLNYLVLKVELEVLPEAEEEEEEGRDFPYWYIEVPLFAGG
IALFAVAYKWAAASQAAKAKRATMV
back to top

mRNA from alignment at Scaffold_618:683604..695497+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft968_17a-0001 ID=EsuBft968_17a-0001|Name=EsuBft968_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=11894bp|location=Sequence derived from alignment at Scaffold_618:683604..695497+ (Ectocarpus subulatus male Bft15b)
CCTCTTTTCCCACAATCGAGCCTCCGACGCACCCGCCGTCAACGCACTCA AAGGCTACGGCAGGTTTAGTCACACCCGCACACACAGCAGAGGCACTACG AGGAAGGGAAAGACGGACGCAGGCGGCCATGCGTGTCGCTCCATGGCTCG CGGCGGCGGTGTGGTCGTCGCTGTTCTTGGCGAGGCTGGAGGAGGTCCGG GCACAGGACGACTCCGTGGAGGAGGCGGGAGACGATGCCCAGGTGGTATC TGCATTTGCCCAAGGCGGCACTTCCAACGTGGCCGATGACTAGTGAGTTT TCGAAAGGCGTCGATAGATCGTCGGCGGTCATGAGCTAGAGACAGGTGCA TTGAATCAGGCTCTCAAATGGTTGCCTCACACGTCACACATGGTGTCTCG TTTTTGAGACCCTGCCCCGCAAGCTGAGACGTCGGCCCCAGGGTGTACTG CCACACCGGCCCCTCTTTTTCGCTCTCCACGGGGCAGAGACGCGCGTCAT GTAATTCCTGCACGAGCCACTGGGCAAACACCAACCCCCACACATCAATC CTCCCGCTGCTGTAGTACTAGACCAGATGCTCCGACGAATGAATGCGCGA AGGCTGGTGCAGCAAGTGCGGCGCTGTTGTCTGGTCGAATCATATGTATA AGTGGGAGCATTGCTTGTCGGTCAAGTGGAGAAGCAAAGAGAGGAGGTGC TCTCGACCTGAGAACACACAAACACACACGGAGGAGTTGTGGTGTTTTGG CCCGCAAGCGGTAACGCAGCCCTTTGATATGCCAAGCTACATTCCAAATC GCGTGCCGTCCTTATGATACACAGGTTGGTTGGTTTTGACGGCCAATCCG GGCGGTTGCCCCGCATACAAGTAGCTTCCTCTCCAATTACCGCGTAAAAC AATTTTCTTCGCAAATTATTTCATGTTATTGATATCTTCTCCTGGTGGTT ACGAGAGCACAGGGGAACACAGCAGTGGGAAGTGGTGTAAGGAGGAACGA GGGCGCGACGGCATCGATTTTTACGACGGGTCGGCTTGTCTCGAGAAATA GCGCGCCTGCAAACTTCTGTGTACTTGCGCAAGCGTACAGCGGTGATGTC CGCGTTATACCGCAATGCATCCGTAGGTAACAAGCTGCACCTCCCGACAT CTTCTTTCCACGACATACCTTCCCGGCATACGTATAGCAGCCAGAACCAC AAGACGGTCACCAAACTGTCTTGTAGAGGCTGTTACCCACAAGGGAGAAT CGCTGTGCGCTGCTCGGGAAAGAACATGAAAGACTCGTACAAATCAGTAT TTTAGTGCCCCGCTCATGTGTATCCACCGCTCAAGTTATTCTGGACGCTT TATCGGTGGATAGAGATGGGTTCGCGGTGTTGCAACAAGAAAAACCCGAC GCGGTACATCGGGACACCGGCGCTATTGTATTGCTCTTGGCATATCATCC AAATTCCGTGACGCGCGATTTTTTCTGCGGTGTATCGGGACCCGCGCTAC CCGGGACCGTGGCCAATCGGGACCCGCCACCCACAAGCTTGTGACATCCT TCCACTCCATCGTTACCAAGACCTTCACTGCTGTATAATACTACTAACAG AGCAGTGCAAGCACGCGGGTGCAGAGCGGTGCAGAGGACGTTGTCCGCGG AAAGCACATGCCTCTGCGTGGGCGCTGTCAGTTAGCCTCTGCCACCTCCC CGTCAGGTTTTACCCTCAGCAGGCTCTACCCAGTCACTCCCACACGTGCG CTTTCTGCGAGCAAGCGTGCTTCCCATCCCATCCTCACGGGATATTGCCG TATTTGCGTTCTGTTGCCCCTCGAGGGTGTTTCTTAAGCCGTTGGGTTTA TTTCTGTAAGCGAATCGCCTTGCTTCCTGCCAGCGAATGCCGTAGCCCCC GAGGCTACGTAAGATTGGCTGCCCATCAGCAGCAACAATACCAATCAACA TAGACAGTGATCCAAAAAGAGTATAAAGAAAAAACATGTAAGCTGCACGT AATTTTCTTTGACGTGAGCCATAAATACCAATAACTAGAAACATCGGATT TAAAACAGCTTCAAAAAAGATACAGAAAAATAATAAATCTAAATTGCAAC ACCTGTGCCTTGGCCACAGGTGGGCAGCGGCAGAGAGCTCGCCGTGGGCA CCGATGCAAGCAACCGCTGTGCAACCTCTCGACAGCACAAGAGTAGAAGA TAATATTATATATAGAGGGCGACCAGTGGCGCCCTCGTGCGTCTTCTTGG CGGCGAGCGATGCCGTCGACCTTACCGCATCTCGTTCTGCACTGTTGCTA TTTAAAGTCTCGTCCTCGCAACACACCGTCTGACACGCACGCCTTCTCTT GACTCTTTGCGCGCCCGCCGCCGCCGCCGCTGCTGCTGCTGCTGCTGCTC TTGCGGGGTTCTGATAACGCCAGCGCTGTGTCGGGGTTCTGGTTTGAGGA TACCGCGCAGCTGGTCGTGGCAGTAAACACCGGCAATGAACTATCAGGCG GGAGTAACGGTAGGCGCACAACATGGGTGTACACTCGTTCCCAAATCTCC GGGAATCCGTTCCGCGTATCCCCCTCGTAATGCTCTCCGTCTAGCGATCG TCGTGTTTAGCATTTGATCCCCCCCTGATAAACGCTTGGCAACGACGTCG TTCAACAAGCCGGTCACTTCGTGAGCTCGACACCCAGCTTGCCGTCGTTG TTTTTTTAGCGGTGACTATGATGTTGGTCGGGTAGATTATGTTGTGCGGG GTCGAGGAAGGGGATGATCGCACCACGAAGGGGGAGACAAGACAAATCCT TCCAAGTCTGGGCCGGTTGACAAAAAGTAAAAAGTTGTAATAACAGCGCG GAAAGGAACAAGATTATCTAGGGGGAAGGGGGAGGGGGTGTACCCATAGT CGTGCGTGCCATATTATAGTCGCAAGAACATTAACCTCGCATCTCTTCAG GGCCGGGACGGAGCATGCCAGGTTCCCACCGGACCAGGCTCTCACATCAT CAACAAGCGCGAAGCGCCGTGAGGTATTCGGCGAGTCGCATGGAGGGTGT GCCGCATCTTGCTACGGGTGGTCCCCATCTCGTGCTTACTTTCTTGCATA CGGATGACAGCAGCGAATCCTGAACTTCTGGTGCCTTGACTTCCAGACAG TTATGAGCACTGTATAACTGCCTCGAGGGCGCTTGACCCGGCCCCCACGT CTTCTGTTTTTTTTTTATATTATATCTTAAGCCGGCGGCACCGACTTCGT CGTCATCAGATTCGACAGCGACCTCGAGGTGGTAGATTCCGCCCAGTTTG GGGGCGATGGGGACGACACCATAACCTCCATGGCGGTTGACGAGGTGAAT CAGAGCGGCAGCATCATCATCGTGGGGTCGACCGCCTCCGATGACGAGCA CCTCTTCGGTCTCGACACCGCACGTGAGTCACGGTAGCAGTAGTTACATC TTACAGAAAAGGGGGTCCCCGGATATCAGGCGAGCTGATGTGTGGTGACG GCCCCATAGCGCAGACGCCTTACTCATTGTGTAGTAGAGAACAACTTGGT TATTCCATCTACATGCATATGCCAGCCAATTCCACTTAGAGGATCGCGTT GTTGACACCTCCTTGTTCAGGGCCCCTCACTTCTGCACTCGTTCTGGACT CTCGGCTGTTCGAAGGCAGTGGGGGACTTGGGTTCTCCTGAGAGCCAACA CGCCTCCCTTTCTGTCTGCAGCGTCCTTCTCGTCTCACCCCCCCTTGGCC ACCTCTCTCTGGTTTCACCAAACCTGCCCTACATTGCTGCTGCTGTCCAC GCGGTCACCACACGTGCCCCGCTTAGGACACATTGCTCACTGCAAGAAGT ATGTAGAGGATTTGTAATTCTCCATCGACTGCTGTAGATAGCACTCTAAT CCTCGCACCACAGCAGCAGTCGGAATTTCTATCTCTCTCTGCGTGTCTAG CACAGGCGTACACCCTTCTTGTCGCAAGGTGGTTTCGTTCCGCGCTAGAT GGACCGTCCCTTGGTTGTGCTTGGCTTGATTTCCCGCTCTCTCCCTGTCC CTCTTTCTCTGTCTCTCTGTCTCTGTCACTATGTCTCTCTCTCTCTCTCT CCCTCTCTCTCACACACCCACACCCTGTCTCGTTGTCTGTCCTTCTCAGC CCGGGAGCAGGACTATTTCATCGCCGCGTTGAGCAGCGACGACCTTGAGG TCACCAAGCAGTTCGTCAACGGTTCCCAATACAACAACGAGGTCAGCTGC CACTTTTTATTTATTTATTGTGTTGTTCTATTTTTTCATATTCAAGCAAA GAACGATCACCCCGTTCGAGATGTTGTAACCAACCACAGTAGTCGAAAGG GATGTGCTGAACTCTTTGCGGTGGTGGGGGTGTATTGTTGACCTCTCGCC CTGCCCGACGCTGGGTGGCGCATGACGTGCATAAGCCATCACCTCCCTCC TTATTCATCCGTCTCCATCCTTGCATATTTTCATTTTTTTTTGTTCCGCC CTGCTGACAGACGTAGCCACAACCTCCCTCGTTTGGTGAATTCTGCCGGC TCTCCGATCCTTTACGGTGTTGTTTTTTTTGTCCGCGGTGCTGACAGGAA TTGACAGTCGTCGGCGTGGAGCCGGTCGACGAGGGCAGCTACTTCGCGGC GGGTTGGGCAGCAAGTAAGCTATCTTGCTTGTTTTTGTCCGTGTCCATTG GGTCTGAAAAATCGAGACAAATACACGTACACATGTGTGTGTATGCTCAT ACTCTCTTGGTGTGGCGAGGGAGGGCATAGGGCCTGTGCCAAAAACCAAA CAAAACAAAAGCTGGAAAAAAGACAGCCCAGAGGAGAACAAATCGTCGGA GCCCCCGCCGAAATGTCGCGATATCGTAGTATCGGTGTTTAGTTTTTTTT TTCTTGCATTTTTCTAAGCGATTTCGGCACAACAATGATTTACGTTGCCC TGAGGGTGAACCCCGCCCTCTTCATGTCTCACGTTGGCCATCACTATCGC ATCCCCGCCAAGCGAAAAGCGACGCACGTACGTGCGTGTACATGTATAAT AGCCTATCGTGCGGGCACGCAGGAGGCGCTCCCGGCCGCGTGCTTCGCAT TGCATGCGGATGATGGCTCGGAGCAACACCCTCTCCTGAGTTTTGCGTTG CTCGTTGGTCCGCCGTTACACCCGCGAACCGACACTGAATGAAGAGACAC ATTTTGGTGGCCCCTCGGAACCGACACTGTGTGAACCGGCATTTGGTCGC CCCTCGCAAACCAACCAGGCGAAGACGGACAGGACTGGTTCGCGCTCAAG ATAAACCATGACATGGATGACATACTTTGGAACAAGTCTTTCGAGACCAC GGCGGTGTCCGACCTGCCCACCGCGATGGTGGTGGGCGAGGAGGCCGTGT ATGTGGTGGGGTATTCCGCCGACTTCGAGGGGGATCTCGGTGAGTTGCTG CTGCTGCTGCTGATGCTGATGTTGATGCTGTCGTTGTTGTTAGAAAGGTG CAATGATGAAGGATGATGTCCAATCTCGATCACCTCGGGCGCACTTTTCT GTGAGATGTACGGTAGGTGCAATGATGAACGACGAACAATCTCGGTCACC TCGAGCGGCCAGCCCGCGCTTGCGACCATGCCGTTACGTGCGGCTGAGGG GAGTCCCGGTGATGCAGTAGCGGTGATGTACTTCACTCTTGCAGAGCGCA AAAAAAAATTGGGTTCCATGTTCTTGTTCTTGTTTCCCTCGTTCGACGGA GGGACAAGTGTTTCGAGGAAATTTCCGGCCCAATAATCAAGTTGGTCGAA AGAATGGTGCTGATCCAGAAACTCGGTTGGCTGTTGGTTGTTTTTGAGTG CAGCAAGTGCCGCTGGATATGGTATGGATGGGTGCTGTGACTCAACGAAA CTAATCCATTGGGCGCGATAGTTGAGGGAGGGGGCGGGGGGGGGGTCGTA CACTTCTGTTTTTCATGCCTCAGCCGTTAGACCATTGACCACGCGTCCTC GAGAGGACGGAGCATTGTTCCCACAGGACCGATCACCGATGGCCAATCGT TCCTTCCCAGTGTGCCAAAGGGGGCTCAATCATATCTTCCCCTAGTCTAT CTATCCTGTTGGTGTCACTTCCCGCACTTCCAACCCAATTTCTATTCCCC AGTACAGAGGGGGAGGGGGAGAAACGCGGGAGAAGCCCCCGTGATACAGC AGGTTCTAGCCAGCAGCCAGGCCTTGAAGGCATACCCGCTTTCGGCCGTG GGTCGGCTCCGTCACCAGTTTTTTTGTTCTCGAACGAACGTCCTCGTGAT CTTTACCTTTCTGTCGCTTTCTGGCAGACGACGACGAGGTGGAAGAAGTT TCGTCGCTGTTCGTGTATGCCCTTGACATGGACGACGGCAGCACACTCTG GGAGTTGACCACCCAGTTGGGGTCCTTGGTACGTTTTTTTTTTTGCGTTT TTGCGTTTTTGCCGTTTTTCGGTAGTTGTCGTGACGGAGGGAAACGAGGA AATTTCACTCTGATGTACTTGAATGTTGCATCATGTCATGCCTGGTATTA TGGTGGTGAAAGCAGCTTTCTGTTCCCGAAAAGGCTATTGGTTTTTATGA AACTCGAAGATCATGTCTTCCTGTGTATTGGTACGAATACATTTTGCCAA CAATACGCGACTTTCTCGGATATTGTATTGTGAGGTGGTTCTGCCAGTTT CTCATGGTTGCTCAAGAAATGAAAGAAAACGGAATAACAGAGAGAGCAGT GAAATCACGAGAGATTACAAGTTGTGCGTCTGTGCGCGTTTTCGGCGTGA CTCCAGGCCACCCGGCACTCTCGAAACGAATAGCGTACGTAGCGTTGACC GTATTTTTCTCCGTCGGTTTCTGGCTTTTTTTTTCAGGCGGACGGGTCTC AAGCTCATGGCGCTGTGCTCAGCGGGAGCGAGCTTTACATCGCGGGACAC ACTAGCGGGATCATCCCTGACTACGACGGCGACAGTGAGTGGATCCTCCC AAAATAACGAAAGAATTTGCCCCCAAGGTAGTTTTTCATTAGAAAATAGA AGTAAAACATGAAACACAGGAAGACTATCGACCCGTTCGAGATACAACCA AACAAAGTAGCAGTCGAAGTGTTTCTTCTGATTTTTTTTGGTTTCCGCCC CAGGACGTTTTGAACGCGGGCTTATGGATGTTGCTGCAAACCCGTGAGGT CGAGTGACCGTAGGCTTGGTCCTCTTCGCCTATTTGTCCTTTTTTAGTCT CCTCTTCGTTTGTGGCCGTTTCTGTTGTGCGGCACCGGCGGGGCTCAGCT GCTAGACCATCGACCACGCGTCCTGGAGAGGGCGCAAGTTTGAGTCTGGA GGGGTTCCCTTTTCTCGGCGAATGCGCTCTTTAGTCTAAGAGCTGGTGTT CTTGCGGGAGTACTGAGAGTACTGCTCTGAGCCATGCGTCCGTCGGTATT GACCCGTGTTCGTGATCGGCGGTCCCATCACGACACGCGACCTGATTTTT GTGCATGCACCCACACCCCACAATCCACGCAACCCGAAGGCACGAAGAGT AACTTGCGACGTGCGCAACCACCCTCCTTCGGTAGTTGTTGGCGTCTCCC TCCGTGAAGAGTAGTATGTACCCACCAACGGTTGTGATCCTACTTGCTGC ACGCCAAGCTAGACAAGCTGATGACGACGCCCCCCTCCCCCCCCATACTA CAAATGTCGGCCCTCAGCTTGTACGGAAAAAGGACGCGTGGACAATGGTC TAACCGCTGAGACAACCAACAGAGCTGAACACGCCCCGTTGTCCCCGTCA TTGTTTGCGTACAACCTTCCCGACCATCAAGTGTGTGCGCACAGCCACGG ATCAATGACGCGTGTCCCACGCCCTAACCGGTCAGGCATGCAAAACGTGA GTACCCCTCCCCCTAACCTTACTGTCAACGTTTGCGTACTGAACGTACAG GCACGGATACCGACGAGCTGTTTGTGGTGGCCATCGACATCGACTCGGAG GAGGTTAGCTGGGTCTGGCAGAGCGAGGCCAACGCGACGGCCTTTGGCAC GGCGGGGATCGTTCTGGCCGATGACGGTAGCCCCATCGTTGGCGGCATCG CGTTCGGGGACCAGTTTAACCTCACCTCCGCGTCTTTCACGTACTGGGAG GTAGGCTCGGGGCTGACACCTTATTTTTCCGGTAATTTGGGGGGCGGGGT TGTAGTCGGGTGGTTTGTTTTGTCGCGCGGACAGACGTCGTGTCAGAGCA AGCAAATATATGCTTCGAAGTGTAAATGTTTTTCGTGCCAACCCGGAGGA CGAACAAAAAAGCTTGGGGGCTGTCCTTCGATAGGGACATTTTTTTTTGT TCCATCCGCGAGCTTGACGACGGCGACCCCGACGGCCGAAACCGTACCGC CGCATGTCCCATGGGCCAAGAACCGCGCGCGTTGGTGTACCGCACCACGT CGCGAAGTTTCTTTGCTGGGCACCACCGCCCGTGTGCAATGGCCCTCTTT TTTCGGTGGGTCGATCCTCGTTCGCGTGAGGTCCCCTCGAGTAAGACCCC CTTCCCGTACATTGATGATCCTCTGCGGGGTGTTGGACCTACCCCTGGTT TATTTGTTCGTTCCTCCTTAAAAAATATCGATGCAGTTCGGCTCCGGTGA CTTCGTCGCCGCTAAGCTCGACATCGAAGACCCGGATGACATCGAAGTGT CCAAGTATTTCGTGGCTGCGGCCGCCAGCAACGAGACGCGAGAACAGCCA TTCTCCATCATCAAGGACACGGACACCGTCGACGGGGTTTTCCTGATCGG CCAACAGGACGGCGTTTTCGACGAGGGGGACTCTGAGGGTGGCGGTGAGA AACACGCAGGAAGCGAATTGCGGTCCGATAGCAAGGCGGAGTTTACCGGA GTTGTTTTTGTTTTGTTTTGTCCCATTTTGTTTTTCATGGTAGAGACATG TATAGCATAGAAGAACGGCATTAAGGGGATGCGACCCGGAATTGCAATGT GGGTTTCATGGAGGTTTTATTTTGTCCCGTTTTGTTTGTTTGACGGTGAG GAACACGTCGGGTTGCAGGAGACGAGAACGGCGGCGAGGAATTCGGCCCG ATGATTCAACGTTGAGAGTTTTCACGTTTGTTTTTGGTATTTTTATACAA CCGTCACCATCATGACAAAGCCGTGCTTCAGAGCTGGCCGGGATTTTTTT TTTTTTTATCTATGGCCTACGACAAATATCTACATGACCAATTAATTTTT TTTTTCGCGTGTGATACGGTTTGGCTTTTGAGTCTGTCTGCCCTCGTATT TTGTGTCGCCCAAGACAGGCGGACGTGCGGCTGTGCCTTGTCACGCGATT AGGACTCGCCTCTCATATGTTGCGACCCCGAAAGAATGGAAAATAGCAAA GCCGCAGTTTACCCTCGATAAACGCGCGCGCGTCAGAGACGACACCTTCG TCTACCGAGCGCACCCTCTGGCCCACGGTCGTGTGTTTGTGCAGAAGGGG GCCAATTCGAAGCTCAACTGCTGTTCGCGGCGGACCGACTGTGGCTGTTC ACCTTGTATCACCCCGACGATATTCGATTATTGTGTTGACGTTCGAATTA ATTCCGTTTTTTGTCAGTAAAACTCGTGTTTTTTGCATCGTATCGTGTGC TCTTATTTGTCTCCACTGTACGCCTTGCAACAAAACCAACGTGCCTAACC CTAAATAGTTTTTAGTTGACCCACCCTATGCTTCCGTCCCCGCAATCTCT TGCGTATTCGTCCGCTCTCAACGTGGCCGTAGACCCGCTCAACTACCTGG TGTTGAAGGTTGAGCTGGAGGTGTTGCCTGAGGCAGAGGAGGAGGAGGAG GAAGGGAGGGATTTCCCGTACTGGTACATCGAGGTCCCGCTGTTTGCTGG CGGGATTGCCCTCTTCGCGGTGGCCTACAAGTGGGCGGCAGCATCACAGG TACGATATGAGACGGATGAATGAAAACAAATGACACAAGGTGTTCCATGC TTCACACGTGGACTCTTGGGCGGAACGTTGAGATACAGCTGCGGCTGCTG CAGGATACTGCTGAAAAACTTGCACGAGTTCGTCATATCCGGCTTCCCGG TCTATTCGAAGCGTGTTTGTGGAAGAGGGTTTTTGTTTACTTTATTGTGG AGTATGAACCTGGTTTTTGATGTCGCTCATGGTTATTGCCGTACCTTGTG GATTTTTTCTTGTAGTCGTTTGTCCAAGATTTCCGTCTTGTGCTAAATAT ATTGAAACCAAACATCACCGCTATCCATCGAATAAACAACAGTTCCACGA TATAACCCAGTGCAAGTTCCTTGTATGCATATATAGCCAAGTGAAGCTCG GCACGCCCAGGTAGCACTGAGCATCGTTCCTCCTGTTCCCCGCCACCCCC AACGAGCCCCTCTTCACGATTGCTACGCACCTCATCAGGCGGCGAAGGCG AAGCGAGCAACGATGGTGTAGGTAGACCCAGAGGAACTCCGTGCGGCGGG GCTAGGGGATGGAAAATATTCGTCGCCTCTCTTTGTGGCCAACGCCTCCT GAAGACCAGGAGATGGCAGGCAAAAAGGAACAAATTGCCTCTACAAAAAT ACTGCTGTCATTCGCGCGTCTCATCTTGTAGTGGGCGCGCGTGGTCGGAG CAAGTGTCGTCGGAGGTGTTGTCGGTTGTGTGTATCGTGTGGTTGTTGTA ATTCTCGTGGTCCCGAATAGTTGGACGTCCTGTGGTGTATGCGTTACGTC GTTTTGTCTCTTGGATTTGGACGTGCTTTCTTCACCTTTCGACGTTCCTG CTTCTTTCTCTTGGAGAGTTTTCTACGTTCGCGATCTACCTGCTGTTGTT GGGTATGTAGCATCGGCGAGCTTGTGCAAGGCAGGTGGCCCGACTCTCCC CCTTGTGTGTGTAGTTGTCTTCGTTAGCGGTGTTGTTTGTAGCACAAGAG GTACGTGTTGCTCAATAGCTAGGGCTTTGGAGTCTGGTAAGGGAAGCAGA GGGAGGGGGGGGCACGCAGACGGGGGAATTGGGGAGGACGAGTCCGTGCA ACTGCTGTGTGTGGTGAATCACGTATTTTCCATCCGGTGGCTTCAATCTG CCCACGGGGTGTCAATTGTGTGTTTGTTTCGGTTCCTGATGGATGCCACC CGTCTGTAGCGGCCGTAGTTTTTTTTATTGGGGGGGGGGGGGGGCTTNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATCTACCTCTTGTGAGTC AGGCGCTACGTCGGGTTTCTTTCTGTCCAGCAACATCATTTCTGTTTCGT GTTCGGCTATAGCTACAACTACGCGTGTATCTTGTTTTTTCATGCCATTA GTGGCTTTTTCGAAGCTGTCCTGCGTGGGTTGGCGGTGTTGTCGTGGTCT GCGGCCACGCCTCGAAGTGTATGGTTTGGCCATTACAGCAGTGTTTGGTT GGGTCCACCCTGTTTTGGAATCGAACATAAGACTAGGGGAGGGAGGGGGG GGCACGCGGGTATTGCCGGATAGATTATCACCATTTCAGGGTACACTTGG AAATCAAGACGACACCAATCTCTGACAGCATCCGCCGTAGATCGCGGCGA AACCAATAAACAGCTGTCTGTGTCCTGTGTGTCCTGTGCCTCGGAAGCAT GTTGCACGAGGCAGGTCGTGCCCTTTTTTCTCTCTCTCTGTGCCTCTCTC TCTGTCCTTTTACTGATCAGTACCACACCGAAGTACTCGCGCATCAAGCG AGTCCGACCCTCTGTTGAGAAGGGCCGGTATCCTATGGCCCATGAACGAT GAACGAGCGAGCGTTGTTGGTGGTTTGGTTGTGGTTATGTATGTGCGGTA CACGTTTTTTTCTGCGGGTTTGATGCTAGAGCGTCGGGCGCCGG
back to top

Coding sequence (CDS) from alignment at Scaffold_618:683604..695497+

>EsuBft968_17a-0001 ID=EsuBft968_17a-0001|Name=EsuBft968_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1578bp|location=Sequence derived from alignment at Scaffold_618:683604..695497+ (Ectocarpus subulatus male Bft15b)
ATGCGTGTCGCTCCATGGCTCGCGGCGGCGGTGTGGTCGTCGCTGTTCTT
GGCGAGGCTGGAGGAGGTCCGGGCACAGGACGACTCCGTGGAGGAGGCGG
GAGACGATGCCCAGGTGGTATCTGCATTTGCCCAAGGCGGCACTTCCAAC
GTGGCCGATGACTACGCTGTGTCGGGGTTCTGGTTTGAGGATACCGCGCA
GCTGGTCGTGGCAGTAAACACCGGCAATGAACTATCAGGCGGGAGTAACG
CCGGCGGCACCGACTTCGTCGTCATCAGATTCGACAGCGACCTCGAGGTG
GTAGATTCCGCCCAGTTTGGGGGCGATGGGGACGACACCATAACCTCCAT
GGCGGTTGACGAGGTGAATCAGAGCGGCAGCATCATCATCGTGGGGTCGA
CCGCCTCCGATGACGAGCACCTCTTCGGTCTCGACACCGCACCCCGGGAG
CAGGACTATTTCATCGCCGCGTTGAGCAGCGACGACCTTGAGGTCACCAA
GCAGTTCGTCAACGGTTCCCAATACAACAACGAGGAATTGACAGTCGTCG
GCGTGGAGCCGGTCGACGAGGGCAGCTACTTCGCGGCGGGTTGGGCAGCA
AGCGAAGACGGACAGGACTGGTTCGCGCTCAAGATAAACCATGACATGGA
TGACATACTTTGGAACAAGTCTTTCGAGACCACGGCGGTGTCCGACCTGC
CCACCGCGATGGTGGTGGGCGAGGAGGCCGTGTATGTGGTGGGGTATTCC
GCCGACTTCGAGGGGGATCTCGACGACGACGAGGTGGAAGAAGTTTCGTC
GCTGTTCGTGTATGCCCTTGACATGGACGACGGCAGCACACTCTGGGAGT
TGACCACCCAGTTGGGGTCCTTGGCGGACGGGTCTCAAGCTCATGGCGCT
GTGCTCAGCGGGAGCGAGCTTTACATCGCGGGACACACTAGCGGGATCAT
CCCTGACTACGACGGCGACAGCACGGATACCGACGAGCTGTTTGTGGTGG
CCATCGACATCGACTCGGAGGAGGTTAGCTGGGTCTGGCAGAGCGAGGCC
AACGCGACGGCCTTTGGCACGGCGGGGATCGTTCTGGCCGATGACGGTAG
CCCCATCGTTGGCGGCATCGCGTTCGGGGACCAGTTTAACCTCACCTCCG
CGTCTTTCACGTACTGGGAGTTCGGCTCCGGTGACTTCGTCGCCGCTAAG
CTCGACATCGAAGACCCGGATGACATCGAAGTGTCCAAGTATTTCGTGGC
TGCGGCCGCCAGCAACGAGACGCGAGAACAGCCATTCTCCATCATCAAGG
ACACGGACACCGTCGACGGGGTTTTCCTGATCGGCCAACAGGACGGCGTT
TTCGACGAGGGGGACTCTGAGGGTGGCGACCCGCTCAACTACCTGGTGTT
GAAGGTTGAGCTGGAGGTGTTGCCTGAGGCAGAGGAGGAGGAGGAGGAAG
GGAGGGATTTCCCGTACTGGTACATCGAGGTCCCGCTGTTTGCTGGCGGG
ATTGCCCTCTTCGCGGTGGCCTACAAGTGGGCGGCAGCATCACAGGCGGC
GAAGGCGAAGCGAGCAACGATGGTGTAG
back to top