Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft967_9 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 106 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft967_9a-0001 ID=EsuBft967_9a-0001|Name=EsuBft967_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1062bp|location=Sequence derived from alignment at Scaffold_228:272897..273958+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCCCATTGTGTTCACCGTCGACAATTTGCTGGACAACATCGCCACAGC
AGATCCGGCGGAACTGGAGCGGGCCTACAACACCGGACGTGTCTCTCTGG
AGGATGTTGTAGAAGCACCCCATCTGTCGTCCGATTCCCCCCTTTTCGTT
CCTCCTTTCTCGCTCCCGCCGGAAGACAAATTAATCCTCTTGCCCCACGA
CGAGTTTATGGCGTACCAAAGGTTGGACGAGATGTGGTGCGACGGTCTTG
CCGGGAAGATAGCAGAGGCGGAGGCGCGAAAGCAGGAGGAGCGCGAGGAC
GCGGAGCGCCTGGCAGAACGTGAGGCTGCTCTGGCTGCTGCGGCGAGGAA
GCAGGAGGAGGAGCGTGAGGCTGTTGAGGCTGCTGCGGCGAGGAAGCAGA
AGGAGGAACGTGAGGCTGCTCTGGCTGCTTCGCCGAGGAAGCAGGAGGAG
AAGAGTGAAGCTGTTCTGGCGGAGCGTGGGGCGTATCTCCAAGCGACTAG
GGCGAAGCAGGGGCGCTCCGATCGCGGCTGTGGGACCTGGAGCCCCGCCA
CCAGGACCCGCGAGCAGCCCCCCACCCCCGTCGCCGTGTCATCGTCCCCC
CCCCACGCCCTTCCAGGTGCCCCTTGGTTCCCATCGTACCGCCTCGCCGC
ACGAGGAGCGGGAGGTGGCGGCTTCTCCGACGAACGAGAAGGAGCGGGAG
AGGACAGCGACTCCGCAGTTTTCGGTGACGTTGGGTCTTCCGGCCGGTGC
TGAAGACGGAGCATCGTTTGAGGCGGCAACCACGGTGTACGAGTTCCACG
TTGGAGATACATCGTTCCTGTCCCGCCCGCTGGAGATGCCTGCAGAAGAT
GCAGCGTTCCACGATGAGAACAAATTGGCAGCTCTTTTTGCATGGGCTGG
CATCAAACAACTTGTCCGTGCACAATTCCCCCCGCCGCACACCGTTGCTT
TCGGGCACAACTATCACATTCTATAAATCGCGGAACTTCCGCCTACTTCG
CGGCAGTCCGTGTTCCAGCTTTTGTTCGCTCTCCGTCGTGCCACCTTTCA
TTAAGGTCCTCA back to topprotein sequence of EsuBft967_9a-0001 >EsuBft967_9 ID=EsuBft967_9|Name=EsuBft967_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=250bp
MPIVFTVDNLLDNIATADPAELERAYNTGRVSLEDVVEAPHLSSDSPLFV
PPFSLPPEDKLILLPHDEFMAYQRLDEMWCDGLAGKIAEAEARKQEERED
AERLAEREAALAAAARKQEEEREAVEAAAARKQKEEREAALAASPRKQEE
KSEAVLAERGAYLQATRAKQGRSDRGCGTWSPATRTREQPPTPVAVSSSP
PHALPGAPWFPSYRLAARGAGGGGFSDEREGAGEDSDSAVFGDVGSSGRC back to topmRNA from alignment at Scaffold_228:272897..273958+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft967_9a-0001 ID=EsuBft967_9a-0001|Name=EsuBft967_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1062bp|location=Sequence derived from alignment at Scaffold_228:272897..273958+ (Ectocarpus subulatus male Bft15b)
ATGCCCATTGTGTTCACCGTCGACAATTTGCTGGACAACATCGCCACAGC
AGATCCGGCGGAACTGGAGCGGGCCTACAACACCGGACGTGTCTCTCTGG
AGGATGTTGTAGAAGCACCCCATCTGTCGTCCGATTCCCCCCTTTTCGTT
CCTCCTTTCTCGCTCCCGCCGGAAGACAAATTAATCCTCTTGCCCCACGA
CGAGTTTATGGCGTACCAAAGGTTGGACGAGATGTGGTGCGACGGTCTTG
CCGGGAAGATAGCAGAGGCGGAGGCGCGAAAGCAGGAGGAGCGCGAGGAC
GCGGAGCGCCTGGCAGAACGTGAGGCTGCTCTGGCTGCTGCGGCGAGGAA
GCAGGAGGAGGAGCGTGAGGCTGTTGAGGCTGCTGCGGCGAGGAAGCAGA
AGGAGGAACGTGAGGCTGCTCTGGCTGCTTCGCCGAGGAAGCAGGAGGAG
AAGAGTGAAGCTGTTCTGGCGGAGCGTGGGGCGTATCTCCAAGCGACTAG
GGCGAAGCAGGGGCGCTCCGATCGCGGCTGTGGGACCTGGAGCCCCGCCA
CCAGGACCCGCGAGCAGCCCCCCACCCCCGTCGCCGTGTCATCGTCCCCC
CCCCACGCCCTTCCAGGTGCCCCTTGGTTCCCATCGTACCGCCTCGCCGC
ACGAGGAGCGGGAGGTGGCGGCTTCTCCGACGAACGAGAAGGAGCGGGAG
AGGACAGCGACTCCGCAGTTTTCGGTGACGTTGGGTCTTCCGGCCGGTGC
TGAAGACGGAGCATCGTTTGAGGCGGCAACCACGGTGTACGAGTTCCACG
TTGGAGATACATCGTTCCTGTCCCGCCCGCTGGAGATGCCTGCAGAAGAT
GCAGCGTTCCACGATGAGAACAAATTGGCAGCTCTTTTTGCATGGGCTGG
CATCAAACAACTTGTCCGTGCACAATTCCCCCCGCCGCACACCGTTGCTT
TCGGGCACAACTATCACATTCTATAAATCGCGGAACTTCCGCCTACTTCG
CGGCAGTCCGTGTTCCAGCTTTTGTTCGCTCTCCGTCGTGCCACCTTTCA
TTAAGGTCCTCA back to topCoding sequence (CDS) from alignment at Scaffold_228:272897..273958+ >EsuBft967_9a-0001 ID=EsuBft967_9a-0001|Name=EsuBft967_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=753bp|location=Sequence derived from alignment at Scaffold_228:272897..273958+ (Ectocarpus subulatus male Bft15b)
ATGCCCATTGTGTTCACCGTCGACAATTTGCTGGACAACATCGCCACAGC
AGATCCGGCGGAACTGGAGCGGGCCTACAACACCGGACGTGTCTCTCTGG
AGGATGTTGTAGAAGCACCCCATCTGTCGTCCGATTCCCCCCTTTTCGTT
CCTCCTTTCTCGCTCCCGCCGGAAGACAAATTAATCCTCTTGCCCCACGA
CGAGTTTATGGCGTACCAAAGGTTGGACGAGATGTGGTGCGACGGTCTTG
CCGGGAAGATAGCAGAGGCGGAGGCGCGAAAGCAGGAGGAGCGCGAGGAC
GCGGAGCGCCTGGCAGAACGTGAGGCTGCTCTGGCTGCTGCGGCGAGGAA
GCAGGAGGAGGAGCGTGAGGCTGTTGAGGCTGCTGCGGCGAGGAAGCAGA
AGGAGGAACGTGAGGCTGCTCTGGCTGCTTCGCCGAGGAAGCAGGAGGAG
AAGAGTGAAGCTGTTCTGGCGGAGCGTGGGGCGTATCTCCAAGCGACTAG
GGCGAAGCAGGGGCGCTCCGATCGCGGCTGTGGGACCTGGAGCCCCGCCA
CCAGGACCCGCGAGCAGCCCCCCACCCCCGTCGCCGTGTCATCGTCCCCC
CCCCACGCCCTTCCAGGTGCCCCTTGGTTCCCATCGTACCGCCTCGCCGC
ACGAGGAGCGGGAGGTGGCGGCTTCTCCGACGAACGAGAAGGAGCGGGAG
AGGACAGCGACTCCGCAGTTTTCGGTGACGTTGGGTCTTCCGGCCGGTGC
TGA back to top
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