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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G558 |
| ProteomeId | EsuBft967_7 |
| Protein domains | PTHR11469 |
| Protein domains | SSF53697 |
| Protein domains | IPR018189 |
| Protein domains | G3DSA |
| Protein domains | IPR001672 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | glucose-6-phosphate cytosolic os:arabidopsis thaliana gn:pgic pe:1 sv:1 [Automatic annotation] |
| Nb exon | 4 |
| Max annot lvl | 2759|Eukaryota |
| Length | 385 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.65e-81 |
| EggNOG OGs | COG0166@1|root,KOG2446@2759|Eukaryota |
| Ec32 ortholog description | Phosphoglucose isomerase (PGI) |
| Ec32 ortholog | Ec-13_003810.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG rclass | RC00376,RC00563 |
| KEGG ko | ko:K01810 |
| KEGG Reaction | R02739,R02740,R03321 |
| KEGG Pathway | ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 |
| KEGG Module | M00001,M00004,M00114 |
| EC | 5.3.1.9 |
| Description | glucose-6-phosphate isomerase activity |
| COG category | G |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko04147 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0004347 |
| GO | 0009813 |
| GO | 0009744 |
| EC | 5.3.1.9 |
| GO | 0010224 |
| GO | 0046686 |
| GO | 0005829 |
| GO | 0006096 |
| GO | 0006094 |
| GO | 0009817 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft967_7a-0001 ID=EsuBft967_7a-0001|Name=EsuBft967_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=385bp|location=Sequence derived from alignment at Scaffold_228:289216..291229- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GGGGGAGGACCCCAAGGTTGCGATGAAGCACCTGGCGGCGTGCGCTAGCG
AGTCGGCCACGGAGAGGGTCACCGCTTTCGGGATACCCAAGGACCGGCTG
TTCCCGCTGTGGGACTGGGTTGGTGGCCGGTACTCAGTCTGTTCGAGCGT
AGGGGCGCTTCCCTTGAGCCTCAAGTACGGCTTCCAGCAGTTCGACAGCT
TCCTGGCAGGCGCCCGCAGCATGGACAGGCATTTCTTGCACGCGCCTTTG
GAGAAGAACATGCCGGTGCTTATGGGGCTTCTCGGAGTCTGGAACATCTC
GTTCATGGGGTACAAAACTAGAACCATTTTGCCCTATGCGGAGGCCCTCC
TCAAGTTCCCGGCGCACATTCAGCAGCTTCGATAA back to topprotein sequence of EsuBft967_7a-0001 >EsuBft967_7 ID=EsuBft967_7|Name=EsuBft967_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=120bp
MKHLAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSL
KYGFQQFDSFLAGARSMDRHFLHAPLEKNMPVLMGLLGVWNISFMGYKTR
TILPYAEALLKFPAHIQQLR back to topmRNA from alignment at Scaffold_228:289216..291229- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft967_7a-0001 ID=EsuBft967_7a-0001|Name=EsuBft967_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2014bp|location=Sequence derived from alignment at Scaffold_228:289216..291229- (Ectocarpus subulatus male Bft15b)
GGGGGAGGACCCCAAGGTTGCGATGAAGCACCTGGCGGCGTGCGCTAGCG
AGTCGGCCACGGAGAGGGTCACCGCTTTCGGGATACCCAAGGTCTGACGA
TTGTTGTTGTCATCGTTGTTGCTGTTGTTGTTGTTGTTATTATTGTTGTT
GCTACTCTGTGTTGTTCTCGCGTGGTACCCTTTGACCATATTTCTGTTGT
ACTCTGTGCCTGGCGCTTCTCAACCGCGAGAGTGTTACATCGTGTATGAA
ACAAGATAACAATCCCCATTGACCGATTTCCGAAGCTGGATTTGTCGACA
GCAGGAAGTGTCACAGCGCCGAGAACGGCGGCGTTGGAACCACCTGGTCG
AGAGCTTGTTTATAATGTATCGCTTCGTTGACGCATCCTCTTCGTCGTGG
AGTAATCGAGCTTTGAAAATTGGTCCAGGGGGTGTGTTATCTCGTGTCAT
ATACGTTGTTCGAGCTCTGAAAGTCGGTCGAGGGGGTGTGTTATCTTAGG
TCATATTCGTTATTCGAGCTCTGAAAGTCGGTCCAGGGGTTGTGTTATCT
TGTGTCATACACGTTATTCGAGCTCTGAAAATCGGTTCAGGGGGTGTGTT
ATCTTGCGTCATATACGTTATTAGAGCTCTGAAAGTCGGTCCAGGGGGTG
TGATATCTTGTGTCATATACGTTATTCGAGCTCTGAAAATCGGTCCAGGG
GGTGTGTTATCTTGTGTCATATACGTTATTCGAGCTTTGAAAATCGGTCC
AGGGGGTGTGTTATCTTGTGTCATATACGTTATTCGAGCTTTGAAAATCG
GTCCAGGGTGCGTGCCATTTTTTGTCATATACGTTAACTTCAACGCGTTT
ATTGCTTCATGTACAGGACTCGATATTGCTTTTTTGGTGTGCCATTTTTT
TTTTTATTACGGGACTGGCTGTTCCCACGTCGGGGTTAATGTAGTTCTTT
ATGTGGATACATAACTTTGGACTATTTCGTCCTTTGCTTCAGTCTGGTTG
TTATCTCTCTCATTCATCGATTTATTTTTCACCAGGCACTTTCTCCTTGT
TGTCCTTCAACGCTTTGAAGACCTTACTTACTCACTGGCAGGACCCGTTT
TTTTTGTTCCTGACATTTGCAGAGGATTCTCTTTTTTTTCGTTTCGCAGG
ACCGATTGATTGTGTTGCTGATGTTTCTGTCGTTGGCGTTGTCGTCCAAT
CTGTTGCCTTCGGGATGCCCAAATTCTGAGCCTTTTTGTTAGTTGTTATG
CTGTTGTTGTTGGTGTCGTTGTTGTCAATCGTATTTCTTTCATGTGCAGG
ACCCGGCTTTTTTTTTTGTAAATGGCAATGATTCTTAATCTCTTTTCGTT
CTTACTTTTCGCAGGACCGGCTGTTCCCGCTGTGGGACTGGGTTGGTGGC
CGGTACTCAGTCTGTTCGAGCGTAGGGGCGCTTCCCTTGAGCCTCAAGTA
CGGCTTCCAGCAGTTCGACAGCTTCCTGGCAGGTGGGTTGATTGCTCTTG
TTCGGAAGCTTTCTTGTTTTAGTACGGCTTCCAGCTGTTCGACAGCTTCG
TGGCACGTGGGTTGATTGCTCGTTTTTGGATGCTTCCTTGTTTTGGTACG
GCTTCCAGCTGTTCGACAGCTTCCTGGCAGGTGGGTTGATTGCCCGTGGT
TGGAAGCTTCCTCGTTTTAGTACGGCCTTCAGCAGTTCGGTGGCTCTTTG
ACAAAATGTGGGTAAGTCGTCGTTGTTGATTGTGTAAATATTTCCATGTT
CTCCTCGTGCGGGATTGTTTTGTTTTGTTTGTTTGTTACAGGCGCCCGCA
GCATGGACAGGCATTTCTTGCACGCGCCTTTGGAGAAGAACATGCCGGTG
CTTATGGGGCTTCTCGGAGTCTGGAACATCTCGTTCATGGGGTACAAAAC
TAGAACCATTTTGCCCTATGCGGAGGCCCTCCTCAAGTTCCCGGCGCACA
TTCAGCAGGTGCGGTACTGCTGTAGCGCTGGAATACTTGATCAGAAATTG
CTCAGCTTCGATAA back to topCoding sequence (CDS) from alignment at Scaffold_228:289216..291229- >EsuBft967_7a-0001 ID=EsuBft967_7a-0001|Name=EsuBft967_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=363bp|location=Sequence derived from alignment at Scaffold_228:289216..291229- (Ectocarpus subulatus male Bft15b)
ATGAAGCACCTGGCGGCGTGCGCTAGCGAGTCGGCCACGGAGAGGGTCAC
CGCTTTCGGGATACCCAAGGACCGGCTGTTCCCGCTGTGGGACTGGGTTG
GTGGCCGGTACTCAGTCTGTTCGAGCGTAGGGGCGCTTCCCTTGAGCCTC
AAGTACGGCTTCCAGCAGTTCGACAGCTTCCTGGCAGGCGCCCGCAGCAT
GGACAGGCATTTCTTGCACGCGCCTTTGGAGAAGAACATGCCGGTGCTTA
TGGGGCTTCTCGGAGTCTGGAACATCTCGTTCATGGGGTACAAAACTAGA
ACCATTTTGCCCTATGCGGAGGCCCTCCTCAAGTTCCCGGCGCACATTCA
GCAGCTTCGATAA back to top
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