Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft967_10 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 278 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft967_10a-0001 ID=EsuBft967_10a-0001|Name=EsuBft967_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2787bp|location=Sequence derived from alignment at Scaffold_228:268773..272256+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCCCTTCTTGCATGACGCACTTGCAAATAACAACCAGCACGACTCAAACG
CCTCCAGAACCACACAACCAGAAACCCATTTTCAAACTCAAAACAGAAGC
GAAACAACACAGCACATAACCACCGCCGACAGGCCGCACAGCACGCGCAA
CACAGCAGACCACACTGCAGACATGTCCCTGAAAAGGACGATACGTGACG
ACGAGCATTCAGTTGTCGCCGTAGAGGTAGAGGGCGGCGACGCGTGCATG
GCAACGTGGCAGCGGCGGCGGACTGAAGGTACCTCGTGCAATAGAGAGGT
GCCGGGGGGGGGAGGACAACAATGGCTCAATCCAGAGACTCCGGTGGGGT
ACGGGAGGTGATACCGGGGTTGGCGTAGGTCGTCTCCCACCATCTCCCAT
GGTATCATGGTCACTGAAAAATATATGGCATTGTTCACTTCTTGATTGTG
ATCCTCCATGGCGCTAGCGCTCCACAGCCACGAAGAGGCTACCGAGAATG
TTGGACTGCGAAGCGGGTGACAATTTTTGTGGATGCCATTTTGTTGAATA
CATTCACTCTTTCTTTTAGTGTGGGGGGTAGGGGCTATCTAGACCAGAGT
TGCTTGTTCTTTTCAATAGATCGATTCTATCATGATATCAATGACATGGA
ACTGTATATGACATTGTTCACGTGTTGATTGTGATCCTCCATGGCGCTAG
CGCTCCACCAGCACGAAGAGGCTACGGAAAATGCGAGCTGCGGGGCGGGT
GACTTTGTCTGGATGCCATTTTCGTGAATATATTCATTCTTTTTGGGGGG
GTAAAAGCTAGACTAGAGATGGTTGTGGTTTTCATTTTACCGCAGATGCA
TCTCGTCTCCGTTCTGTTGGGTGTCGGTACGAAATCTTTCGGTCACTCGC
GGCACTTGAGCATGATTGAAATAGGATCGACCCGGATCGAAGCTCTCCGT
TCCAAAGTTTCGTCGTGTATTGGCCGCCTTACAGCTGCAATGAGCAACCG
GTGCGTGCCAAATGAAGCCAACATTGGTACTTTCTATTTTACTTCCTATT
TATTGATACAAAACAATTGTACAAATGTTTCAATAATATCTGTTTCATTT
TTCTCCTAAGAAAATAGCTACCAGCATGGTTGGTTACACAATGATCGCAA
TATCATCAGAAATGTACTGTCTGCATTACAAATGCATCTATCTGTAAGAA
AACATTCACTCGCTAAAATTCGAAACAGCAACTGTTTCTTCTTTTTCTAC
GCCTGTCGCCATAGGCCTCGATCCAAAACGATATCCAACTCCTCGGCGTT
TTCGTCACCTGATGCTCCTTTCGCGGAAATAATGGCCGTCGACACGCGCT
AAAGGGGTCATTCCACGTGGCTAAGCAGCAATGACCAGGACACCTACCGG
CGAGAGAAACGTCATCTCCGCTTACGACATGGCATGGACTATTTTTCATT
GCTTTTCCCACAAGGCAGGGCATCCGGCTGCACGTTGCCATGCAAAGCAC
AACTGAGAATAAAATCACAGGGAAACACAGTTGTTGGTACGGGAACCCCG
ATTTCAAAAGTTGCTCCTTTGGTGAACGAATTCCTCATCGTCGTATTCAG
CCGCAACGAGGATCAACGACTCACCTTTCACGCACATAATCAAGACAACC
AAGACAAGTATCGCACTTCATTACACCACTCACAAGTTGGCGGTGTCACG
GATACCAAGATCCCTCGGGACTACTGTACATCTGCACCAACAGACAAAGT
TATCATTCCGTCCAGCTTTAGCCGTGGCAGAACGGGCGAACAACCTCACG
AAAGAAGCGATGGCCATCTCACGAGTGCTGCATCAGCACAAAACAAACAT
GTTTACACAATGAAACCTTGATTGGTTGATGAACGTTTACATTATATTCC
ACATCCGTCCAACCCTGAGAGGCCACAACCGGGTCGCCCAGAGCTCGCCG
GCGTCATCGATAACTACCATACGTTGGGCACGACCATACCGGCATTTTCA
CTCCCATCTAGTCTTTATAACAGACTTCAACCACCAACAACTTCAGCACT
TCATCGTTCCCGCTCGCAGCACCAGCTGCGAAGATTCCATCCCCCCACTC
GCCGCACGCACCCCTGTCACACTCGCCCCTATCCCCGAATTCTTCTCATT
CGCCATCCCATGGGTTAGACCTCTCCAAGAGCACCTCTAATACTTCCATG
CCCCCCAGCGCAGCAGTACATACATGCAGGAACGGACCCCAGCACGCACC
AGTACCATCTCCACACATAATGACAGACAACGTAAACTCCATACAATCAA
CATACAGACATACTCCGTAAATATACCTCCTACTAATCCCCCTGTCAAAA
CAAATATATATCCTGTCTGAACGTTTATTTTGATGAACCATGATCAAAAT
AAGATCTCACAGTTTCGTCGGGAGCGTCTCCTTCTCCTCCTCCTGCGGTC
TCTCCTTCTTCTCCCTGCTGCTGCTGCTGCTGCTCCTCCTCCTCCTCCTG
CCCCTCCTGCCGTTGTTCTCCGGCTGGGCTTGATCGCATGCACGCGTCGC
CGCCCTCTACCTCTACGGCGACAACTGAATGCTCGTCGTCACGTATCGTC
CTTTTCAGGGACATGTCTGCAGTGTGGTCTGCTGTGTTGCGCGTGCTGTG
CGGCCTGTCGGCGGTGGTTATGTGCTGTGTTGTTTCGCTTCTGTTTTGAG
TTTGAAAATGGGTTTCTGGTTGTGTGGTACTGGAGGCGTTTGAGTCGTGC
TGGTTGTTATTTGCAAGTGCGTCATGCAAATAGGGGT back to topprotein sequence of EsuBft967_10a-0001 >EsuBft967_10 ID=EsuBft967_10|Name=EsuBft967_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=62bp
MSLKRTIRDDEHSVVAVEVEGGDACMATWQRRRTEGTSCNREVPGGGGQQ
WLNPETPVGYGR back to topmRNA from alignment at Scaffold_228:268773..272256+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft967_10a-0001 ID=EsuBft967_10a-0001|Name=EsuBft967_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3484bp|location=Sequence derived from alignment at Scaffold_228:268773..272256+ (Ectocarpus subulatus male Bft15b)
CCCCTTCTTGCATGACGCACTTGCAAATAACAACCAGCACGACTCAAACG
CCTCCAGAACCACACAACCAGAAACCCATTTTCAAACTCAAAACAGAAGC
GAAACAACACAGCACATAACCACCGCCGACAGGCCGCACAGCACGCGCAA
CACAGCAGACCACACTGCAGACATGTCCCTGAAAAGGACGATACGTGACG
ACGAGCATTCAGTTGTCGCCGTAGAGGTAGAGGGCGGCGACGCGTGCATG
GCAACGTGGCAGCGGCGGCGGACTGAAGGTACCTCGTGCAATAGAGAGGT
GCCGGGGGGGGGAGGACAACAATGGCTCAATCCAGAGACTCCGGTGGGGT
ACGGGAGGTGATACCGGGGTTGGCGTAGGTCGTCTCCCACCATCTCCCAT
GGTATCATGGTCACTGAAAAATATATGGCATTGTTCACTTCTTGATTGTG
ATCCTCCATGGCGCTAGCGCTCCACAGCCACGAAGAGGCTACCGAGAATG
TTGGACTGCGAAGCGGGTGACAATTTTTGTGGATGCCATTTTGTTGAATA
CATTCACTCTTTCTTTTAGTGTGGGGGGTAGGGGCTATCTAGACCAGAGT
TGCTTGTTCTTTTCAATAGATCGATTCTATCATGATATCAATGACATGGA
ACTGTATATGACATTGTTCACGTGTTGATTGTGATCCTCCATGGCGCTAG
CGCTCCACCAGCACGAAGAGGCTACGGAAAATGCGAGCTGCGGGGCGGGT
GACTTTGTCTGGATGCCATTTTCGTGAATATATTCATTCTTTTTGGGGGG
GTAAAAGCTAGACTAGAGATGGTTGTGGTTTTCATTTTACCGCAGATGCA
TCTCGTCTCCGTTCTGTTGGGTGTCGGTACGAAATCTTTCGGTCACTCGC
GGCACTTGAGCATGATTGAAATAGGATCGACCCGGATCGAAGCTCTCCGT
TCCAAAGTAAGCACGACCTCATCAGCCTGAGGGGCGATTCTTTGAGATGA
AAACGACTGAATACCGTTGGTGGCAGCTTGGGCGGGACGAAAAGGGAGGG
AGCTTCATGTGCACTGAGTGAAAGTGAAGCTGATCTGTTTCATCAGACCC
CTTAAAGAACATGGAAGTGGTCGTTGGGGGAAAACACAAAATGATACTCT
CTCCTGAACCCGGCCAAACATCGGGTTTACACATGAAACGGCCCATGCTC
GCCTCCGCATGACACATAAGTGGGCAACACCCCATGAAAATTGGACCACA
AGGAGGTCAGAAGAGTCCGAAGGCTAAACACCCCTGTTCGTGTTTGGCAT
TCCGTTCCTTGTTACTGACGTCATTTCATTACACGCTCATCGGGCTGTTG
ACACCGGAATACAGAGAATGCACACTCAGTCGCTCCTGCACACACTTATC
TCACATAATTCACTCGACGAAACTTTTTCACTTGCGCACTCATTTCATTG
AGCTCTCGTACTTCCCTCGATTCACTAAGGTTCATTTCACGCAGCTTAAT
TCGCTCACTCAGCCAAGCCAACTTACGGTGAACTCGATGAAGCCATGATG
ACAAAGATACGGACGGCTATGCAACAGGTTTCGTCGTGTATTGGCCGCCT
TACAGCTGCAATGAGCAACCGGTGCGTGCCAAATGAAGCCAACATTGGTA
CTTTCTATTTTACTTCCTATTTATTGATACAAAACAATTGTACAAATGTT
TCAATAATATCTGTTTCATTTTTCTCCTAAGAAAATAGCTACCAGCATGG
TTGGTTACACAATGATCGCAATATCATCAGAAATGTACTGTCTGCATTAC
AAATGCATCTATCTGTAAGAAAACATTCACTCGCTAAAATTCGAAACAGC
AACTGTTTCTTCTTTTTCTACGCCTGTCGCCATAGGCCTCGATCCAAAAC
GATATCCAACTCCTCGGCGTTTTCGTCACCTGATGCTCCTTTCGCGGAAA
TAATGGCCGTCGACACGCGCTAAAGGGGTCATTCCACGTGGCTAAGCAGC
AATGACCAGGACACCTACCGGCGAGAGAAACGTCATCTCCGCTTACGACA
TGGCATGGACTATTTTTCATTGCTTTTCCCACAAGGCAGGGCATCCGGCT
GCACGTTGCCATGCAAAGCACAACTGAGAATAAAATCACAGGGAAACACA
GTTGTTGGTACGGGAACCCCGATTTCAAAAGTTGCTCCTTTGGTGAACGA
ATTCCTCATCGTCGTATTCAGCCGCAACGAGGATCAACGACTCACCTTTC
ACGCACATAATCAAGACAACCAAGACAAGTATCGCACTTCATTACACCAC
TCACAAGTTGGCGGTGTCACGGATACCAAGATCCCTCGGGACTACTGTAC
ATCTGCACCAACAGACAAAGTTATCATTCCGTCCAGCTTTAGCCGTGGCA
GAACGGGCGAACAACCTCACGAAAGAAGCGATGGCCATCTCACGAGTGCT
GCATCAGCACAAAACAAACATGTTTACACAATGAAACCTTGATTGGTTGA
TGAACGTTTACATTATATTCCACATCCGTCCAACCCTGAGAGGCCACAAC
CGGGTCGCCCAGAGCTCGCCGGCGTCATCGATAACTACCATACGTTGGGC
ACGACCATACCGGCATTTTCACTCCCATCTAGTCTTTATAACAGACTTCA
ACCACCAACAACTTCAGCACTTCATCGTTCCCGCTCGCAGCACCAGCTGC
GAAGATTCCATCCCCCCACTCGCCGCACGCACCCCTGTCACACTCGCCCC
TATCCCCGAATTCTTCTCATTCGCCATCCCATGGGTTAGACCTCTCCAAG
AGCACCTCTAATACTTCCATGCCCCCCAGCGCAGCAGTACATACATGCAG
GAACGGACCCCAGCACGCACCAGTACCATCTCCACACATAATGACAGACA
ACGTAAACTCCATACAATCAACATACAGACATACTCCGTAAATATACCTC
CTGTCAAACCAAATATCCTGCTGTCTGAACGTTTATTTTGGTGAGCCATG
ATGTGTAGTCTATAGACTATCTATGTAGACTAATCCCCCTGTCAAAACAA
ATATATATCCTGTCTGAACGTTTATTTTGATGAACCATGATCAAAATAAG
ATCTCACAGTTTCGTCGGGAGCGTCTCCTTCTCCTCCTCCTGCGGTCTCT
CCTTCTTCTCCCTGCTGCTGCTGCTGCTGCTCCTCCTCCTCCTCCTGCCC
CTCCTGCCGTTGTTCTCCGGCTGGGCTTGATCGCATGCACGCGTCGCCGC
CCTCTACCTCTACGGCGACAACTGAATGCTCGTCGTCACGTATCGTCCTT
TTCAGGGACATGTCTGCAGTGTGGTCTGCTGTGTTGCGCGTGCTGTGCGG
CCTGTCGGCGGTGGTTATGTGCTGTGTTGTTTCGCTTCTGTTTTGAGTTT
GAAAATGGGTTTCTGGTTGTGTGGTACTGGAGGCGTTTGAGTCGTGCTGG
TTGTTATTTGCAAGTGCGTCATGCAAATAGGGGT back to topCoding sequence (CDS) from alignment at Scaffold_228:268773..272256+ >EsuBft967_10a-0001 ID=EsuBft967_10a-0001|Name=EsuBft967_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=189bp|location=Sequence derived from alignment at Scaffold_228:268773..272256+ (Ectocarpus subulatus male Bft15b)
ATGTCCCTGAAAAGGACGATACGTGACGACGAGCATTCAGTTGTCGCCGT
AGAGGTAGAGGGCGGCGACGCGTGCATGGCAACGTGGCAGCGGCGGCGGA
CTGAAGGTACCTCGTGCAATAGAGAGGTGCCGGGGGGGGGAGGACAACAA
TGGCTCAATCCAGAGACTCCGGTGGGGTACGGGAGGTGA back to top
|