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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D8LHY8 |
ProteomeId | EsuBft966_5 |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 8 |
Max annot lvl | 2759|Eukaryota |
Length | 196 |
Hectar predicted targeting category | mitochondrion |
Evalue | 0.0 |
EggNOG OGs | 2CXG7@1|root,2RX7W@2759|Eukaryota |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft966_5a-0001 ID=EsuBft966_5a-0001|Name=EsuBft966_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1960bp|location=Sequence derived from alignment at Scaffold_457:89156..94627+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTCGGAACCAGCGGTCGAACTATCGGTGGCCGAGCCACGAGGACTTC GACGGCGTTATTCTGCCAAAGACCGCGACGCTACCGCGATATCTACCACG CAGCCCCGGGAAAGACAACCCCCCCCGCCGGCAGGAGCTACAGGCTCCAG GGTTGCAGACAGTTGTGTTTGGCGCCTCCACGCCCCGCGGTGGAATGGGG GAAGGAGAATGGGGCTGGAGATGCGGCTAAGCGTCTTGGACAAGAAATAG CGCAGGTGCTACGAACTAACGGGACGCGCTTGATTCTGCACTTCGACCTG AACAAGACTTTGATCATGGTTGACCCAGCCGGTCGGAAGACCCAAGCCCA GGTCCTCAACAGCGTGCTCGCGGAGATATGCTGGGGGCACGTGGAACATT CCGGCGCAGAGGAAACGTCGGTATGGACATGGAATGGGGCCCCCCCCTCG ACAGAGCCTCCTCTGAGGAGAACGCTATCTGGGTCGCGTGGCCTGCAGCA ACAGAACCACCATGTGACCGCCCCAGTAGCTCTCGTGTCGTACTCGGACT TTTTGCACCAAGAGTTCGGAGACGCGGAGGGAAAGGATAATCGCCGGATG AAGGATATCAGGGACGAGAGGAAGGGGTGTTTTACAGAGGACGGCCAGCC TGGCGTTGGCCTAAGGGCGGAGTATCTGAAGCTCGAGAAGGCACTAGCGC TACCGGAGGCCGTGGCGAAGAGTCCCCTTGCAAAGGGGGCGGGGTTGGCG GGGAGAGAAAGTCACTACATTCTCCCGTCATTTTTCTGGTGCCTGCTAGC CCTTAAGGAGGCAGACGCGGACTTCGGCGTGGTGTTCCGAACCTTCGGTG ACGACATTCCGGAGGTCGCTAGAGAGTACAACGCGTTCTGCGAAGGGAAT CATCCCCTGTTTCCTGGGGCAAAGATGGACGGCAGTGACGGGCGCGGAGA CTACCGCGTTCACTTAGCGGACCAGGCCGAAGGAAGCCATGGCCACAACA CGTTGGGAGCGTTCTTTCGAGATGAGAAAGGGCTAGCCCTCGTCATGGGC ACTCTTGACAATCCTCAGGACCGGCACCAGCTCAGGTCGATCGAGAGCAA GGGGCATCCCGTCTACCGATCAGTCGTGGACACCCACGACGCCATCTGCG AACGGGTTCTGAGCGCGCTCCCACCAGCAGGCTCTGTGGCACCAAAGCCT GCCGCCACCACCACCACCGCCGGTCCCCCGCCTAGCTGCGGCGAGTCGAC CAATGGGATCGCCGGGAGTGGGGAGACAACCAATCACGGGCGATGCCTGG CCCTGCGAGACTTTTACCCGTTCTGGCGGAAGAACCTGGAGTCCGCCGAG GCAGGGAAGGTTCTTCCGGTTGACCTGTCCGACACTCCGAAGGTGTGGCC GGTCATGTTCGACGACAACATCGGGCACTGGCGTCCTGACGGCAGCGGCA GCGATGCCCACATCGTTGACGTCAGGGATATGGTGACGGGACGGCCTGTG CCTTTCGACATGGCTCTTGAGCGACATATCGTACGGGCAGAACCGTTTCT GGCGATCGACCGGGAAGACGTTGCTGTCGGTGCTGCTGATGATGCATTCG GCCATAATTTCTTCTTGGTACACATTTTGAAGCGACTAGCACTAGAGAGG GCGGGGCTGTACACGAGTGCCTGTGATGGGTTTCCTTCGAAGTTATAGCC TTGATTGGCATGGACCAGAATGGATTGCCTTGCTACTGATGCACAACGCA GAGTACTTTAGTCTATATATTGATTGCAATATATTTGGTGCACGCGTGCG GAAGAGCTTCGGGGCTATAGTAGCTGTGGAAAGGACAACGCGCCTTTGGT TTGTGATTACTGCTGTGGCAATCGTGCCAGAACGTGCATAAACCCCATCT CCTCATCAAAATACCGATGATGCTTGATTTGGCTCGATTTTGAAAAACGT ATGCATACTT back to topprotein sequence of EsuBft966_5a-0001 >EsuBft966_5 ID=EsuBft966_5|Name=EsuBft966_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=565bp
MFGTSGRTIGGRATRTSTALFCQRPRRYRDIYHAAPGKTTPPAGRSYRLQ GCRQLCLAPPRPAVEWGKENGAGDAAKRLGQEIAQVLRTNGTRLILHFDL NKTLIMVDPAGRKTQAQVLNSVLAEICWGHVEHSGAEETSVWTWNGAPPS TEPPLRRTLSGSRGLQQQNHHVTAPVALVSYSDFLHQEFGDAEGKDNRRM KDIRDERKGCFTEDGQPGVGLRAEYLKLEKALALPEAVAKSPLAKGAGLA GRESHYILPSFFWCLLALKEADADFGVVFRTFGDDIPEVAREYNAFCEGN HPLFPGAKMDGSDGRGDYRVHLADQAEGSHGHNTLGAFFRDEKGLALVMG TLDNPQDRHQLRSIESKGHPVYRSVVDTHDAICERVLSALPPAGSVAPKP AATTTTAGPPPSCGESTNGIAGSGETTNHGRCLALRDFYPFWRKNLESAE AGKVLPVDLSDTPKVWPVMFDDNIGHWRPDGSGSDAHIVDVRDMVTGRPV PFDMALERHIVRAEPFLAIDREDVAVGAADDAFGHNFFLVHILKRLALER AGLYTSACDGFPSKL back to topmRNA from alignment at Scaffold_457:89156..94627+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft966_5a-0001 ID=EsuBft966_5a-0001|Name=EsuBft966_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5472bp|location=Sequence derived from alignment at Scaffold_457:89156..94627+ (Ectocarpus subulatus male Bft15b) ATGTTCGGAACCAGCGGTCGAACTATCGGTGGCCGAGCCACGAGGACTTC
GACGGCGTTATTCTGCCAAAGACCGCGACGCTACCGCGATATCTACCACG
CAGCCCCGGGAAAGACAACCCCCCCCGCCGGCAGGAGCTACAGGCTCCAG
GGTTGCAGACAGTTGTGTTTGGCGCCTCCACGCCCCGCGGTGGAATGGGG
GAAGGAGAATGGGGCTGGAGATGCGGCTAAGCGTCTTGGACAAGAAATAG
CGCAGGTGCTACGAACTAACGGGACGCGCTTGATTCTGCACTTCGACCTG
AACAAGACTTTGATCATGGTTGACCCAGCCGGTCGGAAGACCCAAGCCCA
GGTATCAGTTGGTTGGAAGATCTTCAGTAGTCCTTGATACTGCTGTACCG
ATGATATGGCAATTTTCCCACGCTACGTCGTCCACAGAGTATCTATTTTG
TGAACAGTAGCGTAAGTGATGTGATGTTTAGCTTTGAATCACACACTCAG
TGCCTGACTCCTTACCGGTACCTAGGTACACCATTGGGTTGAAGCCGGCA
CGTTTCGTGTTATCCAGAGCCTATTCGTCCAAATACATCTGTGATGAACT
GGTGCGCTTGCGTCATCGCCTCTCTCGGAAGAAATCCCTTTGTATGCCGT
CGCTTTACCACCTTTCTACGCTCTGCAGCCTTCAAGGCTCCGGATGTACC
ATTATTCCCCTTGATCTTAATGCGACGGGCATAGCCTTTGTTACTAGGGC
GCTTGCCCTCCGGCTGTCTAACATTATCGCTCGCGGCGAGATTGAAAGCG
GAACCGTTTCCCCCAACGTAGTTTGCCATGCGCACACACAGTATGTCCCG
CTGTTAGGGGGCACGAAACGCACAAACTATCCGTGAAGACTCCCTCCAAG
AGACTCCGATTGCGGCTCAACGAATACCCTCGGTTGCAACGCTTTCGACG
CCAAAAGTACACGGCATGGCCGAACGCTGGCATGGCCTCTGCTGTTACCA
CTCGTGTGGAATAGGTCCTCAACAGCGTGCTCGCGGAGATATGCTGGGGG
CACGTGGAACATTCCGGCGCAGAGGAAACGTCGGTATGGACATGGAATGG
GGTGAGTTGAGAGCTTGTTCGAAAGGGCCGCCAGAAGGGGCAAATATGCG
CGGGTTTTCCGCCCTAACGATGGCTGACAAGGACGGGGGCGGGTAGCTGG
AGCTGGTGGCTTTTGCAGACGTCCCTGGGATTGATGAGCACAAAGTCTTG
GACCAAAAGAAGGTGGCAGTGCGAGAATGGTTCGTCGAAAACACAGCGGT
ACCTGCTGCACACCAGTGTTTGGGCTGAAATATGATATGGATGTGACAGG
CTCCATGCGTTTCACAGCGTTCGATCATCTGGAACTAATTCGTGGTCCCT
TGGATACCCGACGTCTCCGCTGGCGCTATAAACGCATGGTACCGGGGTCA
GACGTTGTTTCAGTCCACACAATAATGTGCTCCGTCTTCGCCTCCGTTGC
TTGTAAGCCCCCCTCCCTTTGAAGGTCATCTTCGATGCATTCGACACGAT
CATTCTCTCACGCGTGTGTGCACGTTGGTGTAGCGCCCCTCTGCAGCTAC
GGTGCCCCCCTTCCGTCTCCTTCCCTCACCCCATTCGCCCTTTCAACGCT
CGCTTTAGTCGAATTATTTTGCTAACGAAACAAACCCTGAACACTTCCAT
GACATGTCGCCAGTCCAGGTGTAGGTGCCCGTGTATCCAACAACACGCCT
GTCTGATTTCTCGCCGCAACCAAAATATCGCGTCTTAGAGCTTCTACTCC
CCTATCCGCAAGGCCCCCCCCTCGACAGAGCCTCCTCTGAGGAGAACGCT
ATCTGGGTCGCGTGGCCTGCAGCAACAGAACCACCATGTGACCGCCCCAG
TAGCTCTCGTGTCGTACTCGGACTTTTTGCACCAAGAGTTCGGAGACGCG
GAGGGAAAGGATAATCGCCGGATGAAGGATATCAGGGACGAGAGGAAGGT
AGGCGCTGGGGGCTCGCGAAGTGTATGCAGCCTGTGTGAACAGGGTGTGG
TGCTACCTGCTGTTGGGCGAACGGGGCGATCATGAGCACAATGAGTTTGC
CGGGATGAGATGCGTCAACATGGCCAAGCGAGCGCATGCTGTAGGGTTGC
CAACGCCACGCCGTCGTTCTGTGCCTAAGGGAAGGTGTTGATGTGTGACC
GAACTTGACTTGCCCTTCTCAAAGAGTATTCCCCTAAATTGTCCTTGCCG
TGCTTCACGCAAGATCGGCCAATAGCCATGATGTCGGGGGTATTGCGGTT
TATATCACCCCCCACACACTTACACTTGTTACACCGTTGGCTTTGAATGG
AGATCAGCAATTATCTATGGCGAGTATTCGGGAGTGGTACGCCCTCTCTA
AGATCGGTTCAACGCACCGCATGCGGACAAGTTCTTGGAGGAAAATTCCG
CACTAGCCTAGCGTAGGTACATACCTAGGTTGCCACCTCTCAACCTCTCC
TGGCAGCACAGCTCACAAGGGCAAGCGATAAAAAAACATTCCTCTTTCCC
ATTTTCCGCGTCATGCATGACGTCATGTTTCCAAGGGGTGTTTTACAGAG
GACGGCCAGCCTGGCGTTGGCCTAAGGGCGGAGTATCTGAAGCTCGAGAA
GGCACTAGCGCTACCGGAGGCCGTGGCGAAGAGTCCCCTTGCAAAGGGGG
CGGGGTTGGCGGGGAGAGAAAGGTGACAGCTCGTCCTTTTTCGTCACTTT
TCTGGTAGGTGTTGGTGCGTGCTGTTGGTAGGACTAGTCAGGAGTGAACA
ACGGTGCCGGCTTGACGTTGTAGCGATAGCCTAGCTCGAGGCGTTATAAT
TTCGTGTTCACGTAGGCGTAAGGCTGCATGTATTTCCCTTGTGTGATGAA
AGAGAAGCTACACAATACCCCACGTATGTATAGGAAAGAACGGCGAAGTG
GACATACATGGGCACTAATGCGGTACACCTGCACGGCCAGGGTGGTCGCA
GGCTCTCGTCGGGCAAGCGCAAGAAATCGAGTGATCATGATCCACATCCC
GCTTTTCCACGACTAGCTGACTCATGCTCCCGCTCTGAACGTTTTCAACC
CAAGCATCGACACCATGAGTCCCCGATCCCTTCCCACTAATCCCCAACCG
CTGCCCAAAAGTACCGAGCCCCTTCCCACAAGTCCGTAACCCCCTCCATG
TCTTCGGTGACCCGGCCTCGCAGTCACTACATTCTCCCGTCATTTTTCTG
GTGCCTGCTAGCCCTTAAGGAGGCAGACGCGGACTTCGGCGTGGTGTTCC
GAACCTTCGGTGACGACATTCCGGAGGTCGCTAGAGAGTACAACGCGTTC
TGCGAAGGGAATCATCCCCTGTTTCCTGGGGCAAAGATGGACGGCAGGTG
ACCACGCAGTACAATTCACGAATTTTCTCCTCCGTGTACCCGCCAGAGCT
CTACTAGTGCCTGGGGATCATGTTCTTTGAGGACATTCCTTGGAACTACT
TCGAAGTGTTCTTTTTACAGTGCGTTGTCTGTTATGAGCATGCATACTTC
AGATGAATTTATGAAAAGACGAGTTGAGTTTCCTCCGAAGCCTTCGATTA
TGGGTCAGTTCTCTCTGGTTGCTGGGTGCCGTTGGTGGGATGCGCGCCAG
ACACCGCTATGTCGGACGGCCGCCCGCCGCGAATATTGTGGTTGTTGACA
ATGGGGGGTGATGTGCTGGCTGAGGCCAGATCTCTTTTTCGGCTTGTTCC
GGGTTGGCAAGCAGTCACCACGCCTTCATCAGAGAGTAGATCAACGTGTC
GCGCCATCCAGGGCCGTTTTGCCAGTATATCGCAGAACCGCAACACGCCT
CCCGCCTTCCGCGGCCTCGTCACTACACGTCGGTTTCAACCCAAAGAGGC
GTTTTTGTCTTTCGATTGTTTCGATCGCTTGCCGCGCTGCCGTCCATCTG
ATGCCCGCAGTGACGGGCGCGGAGACTACCGCGTTCACTTAGCGGACCAG
GCCGAAGGAAGCCATGGCCACAACACGTTGGGAGCGTTCTTTCGAGATGA
GAAAGGGCTAGCCCTCGTCATGGGCACTCTTGACAATCCTCAGGACCGGC
ACCAGCTCAGGTGTGTGAGGCTTCTCCTGCTCTACCCAGCTGTTCACTAG
ATGCATGCGGGGCCGCTCCCTGGGCCCCCTGAAGGGCCTCAAGGCTGGCT
GCTGTTTTAGAGACAGATCGCTTTGAGGTCACCAAGAACTTTATTTGTGG
GTTAGCAACTCGTACTGAGAGGGCCTCCTATGGCGTGACTACCGACCTCA
CCCTCAAAAAGGTACCATGTGCACCGCTTGCCTTTTCCCACCGCCGTGTC
GTGTTTCTTTTTTTTGCCATCCGTTTTCTGGTGGTGGTCTGTCTCACAAG
CGCGCTTCGTATGTATCCTGACCTCCTCCACCGCACCTCGTGCTGTGTCT
GCCTTCCGTATCGCCGAACCAGGTCGATCGAGAGCAAGGGGCATCCCGTC
TACCGATCAGTCGTGGACACCCACGACGCCATCTGCGAACGGGTTCTGAG
CGCGCTCCCACCAGCAGGCTCTGTGGCACCAAAGCCTGCCGCCACCACCA
CCACCGCCGGTCCCCCGCCTAGCTGCGGCGAGTCGACCAATGGGATCGCC
GGGAGTGGGGAGACAACCAATCACGGGCGATGCCTGGCCCTGCGAGACTT
TTACCCGTTCTGGCGGAAGAACCTGGAGTCCGCCGAGGCAGGGAAGGTTC
TTCCGGTTGACCTGTCCGACACTCCGAAGGTAAAGTATTGTATCTCGATT
AAGCACGGTAAGGAAAGGACCACGATTCGCTCCAGGTGAAAAATCTGGCG
CTTGACAATAGTCCCCGCATGCCACCTTGGCTATCCTCTCTCGTCCCGTG
GAAGGTGTGGCCGGTCATGTTCGACGACAACATCGGGCACTGGCGTCCTG
ACGGCAGCGGCAGCGATGCCCACATCGTTGACGTCAGGGATATGGTGACG
GGACGGCCTGTGCCTTTCGACATGGCTCTTGAGCGACATATCGTACGGGC
AGAACCGTTTCTGGCGATCGACCGGGAAGACGTTGCTGTCGGTGCTGCTG
ATGATGCATTCGGCCATAATTTCTTCTTGGTACACATTTTGAAGCGACTA
GCACTAGAGAGGGCGGGGCTGTACACGAGTGCCTGTGATGGGTTTCCTTC
GAAGTTATAGCCTTGATTGGCATGGACCAGAATGGATTGCCTTGCTACTG
ATGCACAACGCAGAGTACTTTAGTCTATATATTGATTGCAATATATTTGG
TGCACGCGTGCGGAAGAGCTTCGGGGCTATAGTAGCTGTGGAAAGGACAA
CGCGCCTTTGGTTTGTGATTACTGCTGTGGCAATCGTGCCAGAACGTGCA
TAAACCCCATCTCCTCATCAAAATACCGATGATGCTTGATTTGGCTCGAT
TTTGAAAAACGTATGCATACTT back to topCoding sequence (CDS) from alignment at Scaffold_457:89156..94627+ >EsuBft966_5a-0001 ID=EsuBft966_5a-0001|Name=EsuBft966_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1698bp|location=Sequence derived from alignment at Scaffold_457:89156..94627+ (Ectocarpus subulatus male Bft15b) ATGTTCGGAACCAGCGGTCGAACTATCGGTGGCCGAGCCACGAGGACTTC GACGGCGTTATTCTGCCAAAGACCGCGACGCTACCGCGATATCTACCACG CAGCCCCGGGAAAGACAACCCCCCCCGCCGGCAGGAGCTACAGGCTCCAG GGTTGCAGACAGTTGTGTTTGGCGCCTCCACGCCCCGCGGTGGAATGGGG GAAGGAGAATGGGGCTGGAGATGCGGCTAAGCGTCTTGGACAAGAAATAG CGCAGGTGCTACGAACTAACGGGACGCGCTTGATTCTGCACTTCGACCTG AACAAGACTTTGATCATGGTTGACCCAGCCGGTCGGAAGACCCAAGCCCA GGTCCTCAACAGCGTGCTCGCGGAGATATGCTGGGGGCACGTGGAACATT CCGGCGCAGAGGAAACGTCGGTATGGACATGGAATGGGGCCCCCCCCTCG ACAGAGCCTCCTCTGAGGAGAACGCTATCTGGGTCGCGTGGCCTGCAGCA ACAGAACCACCATGTGACCGCCCCAGTAGCTCTCGTGTCGTACTCGGACT TTTTGCACCAAGAGTTCGGAGACGCGGAGGGAAAGGATAATCGCCGGATG AAGGATATCAGGGACGAGAGGAAGGGGTGTTTTACAGAGGACGGCCAGCC TGGCGTTGGCCTAAGGGCGGAGTATCTGAAGCTCGAGAAGGCACTAGCGC TACCGGAGGCCGTGGCGAAGAGTCCCCTTGCAAAGGGGGCGGGGTTGGCG GGGAGAGAAAGTCACTACATTCTCCCGTCATTTTTCTGGTGCCTGCTAGC CCTTAAGGAGGCAGACGCGGACTTCGGCGTGGTGTTCCGAACCTTCGGTG ACGACATTCCGGAGGTCGCTAGAGAGTACAACGCGTTCTGCGAAGGGAAT CATCCCCTGTTTCCTGGGGCAAAGATGGACGGCAGTGACGGGCGCGGAGA CTACCGCGTTCACTTAGCGGACCAGGCCGAAGGAAGCCATGGCCACAACA CGTTGGGAGCGTTCTTTCGAGATGAGAAAGGGCTAGCCCTCGTCATGGGC ACTCTTGACAATCCTCAGGACCGGCACCAGCTCAGGTCGATCGAGAGCAA GGGGCATCCCGTCTACCGATCAGTCGTGGACACCCACGACGCCATCTGCG AACGGGTTCTGAGCGCGCTCCCACCAGCAGGCTCTGTGGCACCAAAGCCT GCCGCCACCACCACCACCGCCGGTCCCCCGCCTAGCTGCGGCGAGTCGAC CAATGGGATCGCCGGGAGTGGGGAGACAACCAATCACGGGCGATGCCTGG CCCTGCGAGACTTTTACCCGTTCTGGCGGAAGAACCTGGAGTCCGCCGAG GCAGGGAAGGTTCTTCCGGTTGACCTGTCCGACACTCCGAAGGTGTGGCC GGTCATGTTCGACGACAACATCGGGCACTGGCGTCCTGACGGCAGCGGCA GCGATGCCCACATCGTTGACGTCAGGGATATGGTGACGGGACGGCCTGTG CCTTTCGACATGGCTCTTGAGCGACATATCGTACGGGCAGAACCGTTTCT GGCGATCGACCGGGAAGACGTTGCTGTCGGTGCTGCTGATGATGCATTCG GCCATAATTTCTTCTTGGTACACATTTTGAAGCGACTAGCACTAGAGAGG GCGGGGCTGTACACGAGTGCCTGTGATGGGTTTCCTTCGAAGTTATAG back to top
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