Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LP04 |
| ProteomeId | EsuBft964_8 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SignalP-noTM |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SignalP-TM |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | SIGNAL_PEPTIDE |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Max annot lvl | 2759|Eukaryota |
| Length | 146 |
| Hectar predicted targeting category | signal peptide |
| Evalue | 1.05e-168 |
| EggNOG OGs | 28MTK@1|root,2QUBV@2759|Eukaryota |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-06_007090.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft964_8a-0001 ID=EsuBft964_8a-0001|Name=EsuBft964_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1464bp|location=Sequence derived from alignment at Scaffold_604:322480..328210+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GGTCAAAACACCTCCACGAATGCCACGGCTCTGCTGCTACTGCTCAATCT
CTCTTGGCCACTATCCTTTCGTGTGTTATACTATGAGGGCGCTGGCAGTG
TTGACTTTTGCGGCCGCGGCCATCCCACTCAATGCCCAGTTCGGCATGGC
GCCCAATCCAAAGAGCGAACCAGTCAAAGGCGATCTGGCCGCAATTAAGT
GCGGGGTCTGCCAAGGCCTGGCGGAGCACCTTTACGAGAAGGTGGCGGAG
ATGCGGGAGGCGGCGCCTTTCGGAAAGGTCCATGAAGACGATATCTCGAC
GGTGATAGAGGGAGCCTGCGACCCCGCAACTAAGGAGGGTCGATGGATCA
CGGAGTACGACATCGTGGAGGAGGGGGGATATCTCGAGTTGAAGAAGCAG
GACAGCTTTTCCCACTGCAAGGAAGAGTGCGAGACCATTGCCAAGAGCTG
CACGGTGCTGGTGGATGACGAGTTGGACGTTGAGGAGGTGGTTGTGGCAC
TATGGAAGAACAAGCTGGGATTGTCGGAGCTTCAAAAGGCAGCTTGCGGG
GAGTGGAGCGATCGGTGCTCGGGGAAGAAGCGCGTGAAGGCTCCGAAGAA
CCGCCAGGATTACGAGTTCGAACCGAAGACGGCGAAGGACTTCGAGGTGG
CGGAGGCGATGGCGAGGTTGCAGAACTCAATGGGCGGGATGGGTGGACCG
GGAATCTACGGCCCGGATGATCTCGCTGCGATGGACGCGATGATGTCGCA
GATGGGCGACATGGGTCAAGACCCATTCGCGGACGACTTTGACATGGGCG
GAATGGGCGGCATGGAGTTCTGAAGGAGTTTAGCATGACGTTTTACTAGT
GTACGCCCGATCTGGTGGAGGAACGATACATTTCTGTTTTGTAGACTACG
GGCGTTTCGGCCGATGAAGGGGATTCACATGGGGTCCAAAGTAGGTTTTG
TGTGTACAAGTGGCACTGGTTCCTGTTGTTGTTGAAGGGGTGTGGCAAGG
TTGATGTTCGGCCTTGGCCAGGTGTGTGGGAGGGACAGAGGGTGCTCAAT
GGAGGGTAGGTAACATCGTGTTGCGTTTGTGGTGTGGTATGCATATGGTG
ATCGTGTTGTTGGTGGTTGAAGGGAAGGTGTTGTTTTAGTGAACGGATCC
TCCGCGGTTTGTTGCACAATTCAGGGAGGACGATAGGTGTTCTCCTTCCC
TCGGCAATGTGAGATGACAGTTTTTTTTGTGTCTCATGACAGCAAGGGTG
TGACTCCTTTCTCTCGTCCGTGGTTACGACCGTCTCCGCGCCCTAACCCC
ATTAGACTACGTCCGGACATGCCATGTTCCGAAACCCGCATGACAGCAGT
GTTTCGGGGTCACAGAGGGGCGACCCCACTTGAGAACCTGGGAAATTCCG
GCTCACGAAAATACTACTTTAATGTTGGCCTATCGTAACATGTGCTCACA
TCCGTAAGGGTCCT back to topprotein sequence of EsuBft964_8a-0001 >EsuBft964_8 ID=EsuBft964_8|Name=EsuBft964_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=246bp
MRALAVLTFAAAAIPLNAQFGMAPNPKSEPVKGDLAAIKCGVCQGLAEHL
YEKVAEMREAAPFGKVHEDDISTVIEGACDPATKEGRWITEYDIVEEGGY
LELKKQDSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSEL
QKAACGEWSDRCSGKKRVKAPKNRQDYEFEPKTAKDFEVAEAMARLQNSM
GGMGGPGIYGPDDLAAMDAMMSQMGDMGQDPFADDFDMGGMGGMEF back to topmRNA from alignment at Scaffold_604:322480..328210+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft964_8a-0001 ID=EsuBft964_8a-0001|Name=EsuBft964_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5731bp|location=Sequence derived from alignment at Scaffold_604:322480..328210+ (Ectocarpus subulatus male Bft15b)
GGTCAAAACACCTCCACGAATGCCACGGCTCTGCTGCTACTGCTCAATCT
CTCTTGGCCACTATCCTTTCGTGTGTTATACTATGAGGGCGCTGGCAGTG
TTGACTTTTGCGGCCGCGGCCATCCCACTCAATGCCCAGTTCGGCATGGC
GCCCAATCCAAAGAGCGAACCAGTCAAAGGTGAGTCGCCTGTGACTGCTG
CTGTCGCATCCGCTCGCTCGATCTGCGATCCTTCTTTCCCCCCTGTTTTG
GCCGGTAGATTTGCGATAATGTCTTGGGGGGAGGCTGGTGCCACTGAGCA
CGGTCGTAGCAGAACAGGCGGAAAACTCAGGTAGTCGCACGTGTTGTTGT
ATGGGACGGGACGTCAACGAGGTACAGCAAAAGTTCGGGTCTTTTTTGAC
AGGGGGTACGTCCGCTCGTCGGTCATTCCTCATGGCATGCCATGTGTCGT
GGGCCCCCTCAGCTGGCGGATGAATTCCCGTGGTTAGATGTCTCTAGCGG
GGGGGTGCTGAGAGAGATGGGCTAAGGAATTCTCGCTGACATCTTTCGGT
TGTTGTTTCCGTCAGCGTGTGGGCCAAAGTGGGTGAGACAACGGCGGACT
AAACTACGAATAGCAGTCCACCCACGTACATTAGACTCCAAGTATCGTCA
AACGTTCTCGAAAGCATCGACAACATCGTCTCTGCGGACATGACCTCCTT
GATCGCGTAACATTTCCAAGTTGATATACAGCGGTGTGTGAGATGTACAG
CATATCCACTACGCTACAAGTCAGCCGCTGACTTGTACCATAGTGGATAT
GCTGTTCTTCTTAACAAGACGGTGTGCTGCACTCATTCACTGATTGCTGC
ACTGATTGCTCCGTTGTACTGGGCCAAGCAATCGTGTCCCTTACTCGGGC
GTGATGGGGTAGGGATGTTCGCCGCTGGTTGCACGTCTCTCTCTTGCCGC
CGCCGCTCGCATCGCCGTACATACACACCCAGGCTCCCCTTGCGGTCGTG
GAAGCATGTTTCTGAGTATATCCCTACCCCGCACCTGACTGAGTTCCTCT
ACGTTCTCCTCGGTCTCCTCCCTCCATTGCAGGCGATCTGGCCGCAATTA
AGTGCGGGGTCTGCCAAGGCCTGGCGGAGCACCTTTACGAGAAGGTGGCG
GAGATGCGGGAGGCGGCGCCTTTCGGAAAGGTGTGCGTGTACTTGACAAC
GTTGTTGCTGTTGTTGTTATTTAGTGCCGTCCACACTCTCGCTGCCCCGG
CGCCGGGAAACCCACAGCGCTGCAAATATATTGTTGGATTGGACGACCGC
CGCAGGGGTCATGAGCCCTCGTCTTTGTCCGTGGGACTCCTCTCTCGCTG
TGTTCGGTTTCCCCGCATTCTGCCTACATCTGGCGTGCGTGCATACCAAC
TCGTCGTTTCGGAGCTCCGTCTCCAAAGAAAAGGGAGTGCTGCTGATACC
ATTATACTGCTGTCTGTGGTGTGGGCTTCGTGATACTGCTGTGCGTGAGT
AAGTAGAAGTACAGCAGTAGTAGGACTGCTAAAGCGGCTTGATACTGCTT
TTTTTGACCCCCTCACGCCGCCGCTGAATACCACAACGCCCAAAGGTCCA
TGAAGACGATATCTCGACGGTGATAGAGGGAGCCTGCGACCCCGCAACTA
AGGAGGGTCGATGGATCACGGAGTACGACATCGTGGAGGTGACGAAGGAA
TGCCATGATCATTCGTACCCCGCGCGCTCGGTAGGCCTGGCCCCCCTTGC
CATTTAGTCATCCGGACCTTGACCCACACAACCCGCGGTGTTGCTTTGGT
CACCAATCACCAAGGGATCACGAGCCCATCGAAATTCTCGTCGTTGCCGT
GCGTTGATATGTTGGCTTGTGAGGAGGCCCTTTCGCTGTCGCGTTTTTTT
CCTACCCGCAGAGAAGTGTGTCGTGACGATTTGGACGTTTCGATAGATAT
ATACATGTCGACGTTTCCACGTGTCGTGTTTTCCCAAAATATGTTGCATA
CATTCGGCGTATTCGTGTCCCCTCGTTTGCTCTGGTGTGAGTAGAACTGT
CCGCAACCTCGGTTTTGGTATGGGGTGGTACAGGTATGACTTGCAGACTG
CCAAAAGCGTGCAGTTAGAGACGAATATGAGGTACCAACGATCGGTTGGC
CATTGCTCGAAGCACTGGGTATTGGTCTGTGCGTCATTGCCGAGCTTGTC
TCGTCTGTTTTCTCCCACGTGCCTTGAGTCAAATCAATATGGCTGCAATG
GCTTCGGACGATGACGACTGTTGTATATATGCTTGTGCTGTGTGTTCATG
TTGGTCTCTCTCTTGGCTTTGCAGGAGGGGGGATATCTCGAGTTGAAGAA
GCAGGACAGCTTTTCCCACTGCAAGGAAGAGTGCGAGACCATTGCCAAGG
TACGAATTGCTTGGGAGAGGGCTTGAGGGTTTTGTGTTTCGGAATCGGGG
AGAGTCTTCTGAAGCTGCCACTGCTGTGTCACTTCTCCGTTTGGGCCCCA
TGGCAAGCACCTTGAAGCAGCAGTATTTAAGGAAACACTGTTACAACAGC
TATCACTCCGAAAACATCCACCACTCCCCAACGCGTTTGTTTCATATCTA
CGGGCGTAGCGTAGCGTACCACAGAAGTTACACGGCGGTTAGGAGGTACT
TAAGGACTCGCTGTTATTCTTCATGCCGAAAGTACTTGGCCGCCCATTCA
TCGCTTGCTGTTTCTACTGCTCCTGCACACAACTGGTTCTGCGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCCGGCGCCTTATGTGGAACTTGCGGAACAATCGAACCT
TTCTTCTACACCAGAGCTGCACGGTGCTGGTGGATGACGAGTTGGACGTT
GAGGAGGTGGTTGTGGCACTATGGAAGAACAAGCTGGGATTGTCGGTGAG
CACACCCACAGGCGTTCGGCTCTCAATGCTCGGTAGCTTTCCACAGCGGT
GTGTCATTTGTGGCATTTGCGCTGCTCCTGGACTGCTGTGCCGCCAATAC
TCTTTTGTCCTTGTGACGCCGTCTTGTCGACCACAAGCGTATTGTTTGTG
TTTAACAGAACAGACGCCGGCGTGCAGGAAGGGCTCAGGACCCCTCTATG
TGATATAACAGCGTGCCCAGAGAGATGAATCGGCAATGGGTAACGGTGAA
CGATTATGGTTGTGGAACGAGTGCAGTAGACGACAGGAGAGCACGCTTGC
CTGTTTTTCTGGGGGTTGGCATGCTTGCGTTGGCAGTGTATCTACTATAA
TTTGCTCTGGTTGGGACGAGCTGCTGTCCAAAGGGTTTATCTTCATAGGT
TGTCGGTGCAAGCCTAGAGGAACGTGGCAGCACACCCCCGCAGCACAAGA
CCTCGGTAGAAACTCGAAACGTGTTCGTCCCGCTGCTTGAACGGATCAAG
GCTTGCATTGCCAGGCCAACCGACCGCCGGCACGATGTAGTATAGACTGC
AGGTCACGCTACCCGCCACACACACAATCGTGAAAGGTTCTCGGCCGAGC
GGCAGTGGCAAGGGTCGCGTCGCTCTACCTTAGCAAAGTGTTCGTGATTC
CTCTGGGTCTGGCCTAGGGAGCTGCACCCCTTCACCACCTCTATCCCTCC
AAGTCGCGTGCCAACCCCACCCTCTCTTAACCAGTTCTAGCCCAAACCCA
CGCCGTGTTTCTCGTGTGTCGGGGGACACGTTCGGGTTTCGAAAAACCTG
ACCGGACGCGCGTGTCCCGTGAACGCCATTTGCGCAGGAGCTTCAAAAGG
CAGCTTGCGGGGAGTGGAGCGATCGGTGCTCGGGGAAGAAGCGCGTGAAG
GCTCCGAAGAACCGCCAGGATTACGAGTTCGAACCGAAGACGGCGAAGGA
CTTCGAGGTGGCGGAGGCGATGGCGAGGTTGCAGAACTCAATGGGCGGGA
TGGGTGAGGAAAAAAAGCATATCTTGCGTTGATGTTGCCTTGTGTGTCGT
TTGGTCGGTGGCTTGACTTCGTTCATGTATGTACCATCGGTTTTCAACAC
GAACCGAGCGGGTCTGGCAATATTGTTAGTGAACACCACAAGCCCCATGT
TTGTGTATTTGTTTTCTCAGGGGCAAACATACCCGCCGTGACACTGGTGC
TAGTGCGAATTCCCGCGCTACAGCAGGAACACGTAGGCTGCAAGTCTGTG
TGCAGTGCAACATCCGAGCGCTCGCTTGAAGATCATCGTGGATTCAAACT
CTTATTTAGTTTGTCGTATCATGCCTCATCTCCTTTTGCTTGATACCGGG
CTGAAATGCGTGTCTAGGGAATGATGGGCACGAGGGATGGGCAGGTCGTG
CAATAGCGGGGCAGGGAGTACTCACAGAATTCAATGTCTAGCTGGGTGTG
TCAGCTCTGACATGTGGCGGGTAGCACTACTGTCGGACCAATTGGGATGC
GAAGCCCCTTTCGCACGAGCAAAACGAACGGCAGTGTTACGTCGCGGGAA
GATCACAGGCGTGATACGCGGCTGCCTGGCTGGCTGGTAACTGAACCATG
GCAACAAGAAACGACGAGATCGACCCCCATCCTCGTCGCCGCCGTCCCCC
AAACGGTGCTAAGGCCACACGAAGCTTCAGCCACAGAACGGAAGTGACAG
TCTTTCCGCCCTTTACCACTGAAACAGGTGAAACAAACCGCGTCATGATC
ACTCTTTACTTCAGCCACAGAACGGAAAATGATAGCCACGCCAGTTGGAA
TCGCTGAAGCCCACCGACCAACGCCAAACACTGTAATCCACAACCAAACC
CCCCCACAGGTGGACCGGGAATCTACGGCCCGGATGATCTCGCTGCGATG
GACGCGATGATGTCGCAGATGGGCGACATGGGTCAAGACCCATTCGCGGA
CGACTTTGACATGGGCGGAATGGGCGGCATGGAGTTCTGAAGGAGTTTAG
CATGACGTTTTACTAGTGTACGCCCGATCTGGTGGAGGAACGATACATTT
CTGTTTTGTAGACTACGGGCGTTTCGGCCGATGAAGGGGATTCACATGGG
GTCCAAAGTAGGTTTTGTGTGTACAAGTGGCACTGGTTCCTGTTGTTGTT
GAAGGGGTGTGGCAAGGTTGATGTTCGGCCTTGGCCAGGTGTGTGGGAGG
GACAGAGGGTGCTCAATGGAGGGTAGGTAACATCGTGTTGCGTTTGTGGT
GTGGTATGCATATGGTGATCGTGTTGTTGGTGGTTGAAGGGAAGGTGTTG
TTTTAGTGAACGGATCCTCCGCGGTTTGTTGCACAATTCAGGGAGGACGA
TAGGTGTTCTCCTTCCCTCGGCAATGTGAGATGACAGTTTTTTTTGTGTC
TCATGACAGCAAGGGTGTGACTCCTTTCTCTCGTCCGTGGTTACGACCGT
CTCCGCGCCCTAACCCCATTAGACTACGTCCGGACATGCCATGTTCCGAA
ACCCGCATGACAGCAGTGTTTCGGGGTCACAGAGGGGCGACCCCACTTGA
GAACCTGGGAAATTCCGGCTCACGAAAATACTACTTTAATGTTGGCCTAT
CGTAACATGTGCTCACATCCGTAAGGGTCCT back to topCoding sequence (CDS) from alignment at Scaffold_604:322480..328210+ >EsuBft964_8a-0001 ID=EsuBft964_8a-0001|Name=EsuBft964_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=741bp|location=Sequence derived from alignment at Scaffold_604:322480..328210+ (Ectocarpus subulatus male Bft15b)
ATGAGGGCGCTGGCAGTGTTGACTTTTGCGGCCGCGGCCATCCCACTCAA
TGCCCAGTTCGGCATGGCGCCCAATCCAAAGAGCGAACCAGTCAAAGGCG
ATCTGGCCGCAATTAAGTGCGGGGTCTGCCAAGGCCTGGCGGAGCACCTT
TACGAGAAGGTGGCGGAGATGCGGGAGGCGGCGCCTTTCGGAAAGGTCCA
TGAAGACGATATCTCGACGGTGATAGAGGGAGCCTGCGACCCCGCAACTA
AGGAGGGTCGATGGATCACGGAGTACGACATCGTGGAGGAGGGGGGATAT
CTCGAGTTGAAGAAGCAGGACAGCTTTTCCCACTGCAAGGAAGAGTGCGA
GACCATTGCCAAGAGCTGCACGGTGCTGGTGGATGACGAGTTGGACGTTG
AGGAGGTGGTTGTGGCACTATGGAAGAACAAGCTGGGATTGTCGGAGCTT
CAAAAGGCAGCTTGCGGGGAGTGGAGCGATCGGTGCTCGGGGAAGAAGCG
CGTGAAGGCTCCGAAGAACCGCCAGGATTACGAGTTCGAACCGAAGACGG
CGAAGGACTTCGAGGTGGCGGAGGCGATGGCGAGGTTGCAGAACTCAATG
GGCGGGATGGGTGGACCGGGAATCTACGGCCCGGATGATCTCGCTGCGAT
GGACGCGATGATGTCGCAGATGGGCGACATGGGTCAAGACCCATTCGCGG
ACGACTTTGACATGGGCGGAATGGGCGGCATGGAGTTCTGA back to top
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