EsuBft964_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft964_3a-0001
Unique NameEsuBft964_3a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_604contigScaffold_604:272447..276656 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
ProteomeIdEsuBft964_3
Protein domainsSSF82185
Protein domainsIPR003409
Protein domainsPTHR23084
Protein domainsG3DSA
Ownerapollo_admin@sb-roscoff.fr
Notemorn repeat-containing protein 1 os:homo sapiens gn:morn1 pe:2 sv:2 [Automatic annotation]
Nb exon6
Length1440
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionMORN motif
Ec32 orthologEc-06_007170.2
Date last modified2016-06-13
Date creation2016-06-13
Cross References
External references for this mRNA
DatabaseAccession
GO0071704
GO0016307
GO0009856
EC2.7.1
GO0003006
GO0006897
GO0055085
GO0006796
GO0044707
GO0003779
GO0048856
GO0008152
GO0044424
GO0044238
GO0044767
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft964_3aEsuBft964_3aEctocarpus subulatus male Bft15bgeneScaffold_604 272447..276656 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft964_3a-0001EsuBft964_3Ectocarpus subulatus male Bft15bpolypeptideScaffold_604 272643..276555 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft964_3a-0001-exonEsuBft964_3a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_604 272447..273144 -
EsuBft964_3a-0001-exonagat-exon-110585Ectocarpus subulatus male Bft15bexonScaffold_604 274001..274072 -
EsuBft964_3a-0001-exonagat-exon-110586Ectocarpus subulatus male Bft15bexonScaffold_604 274947..275153 -
EsuBft964_3a-0001-exonagat-exon-110584Ectocarpus subulatus male Bft15bexonScaffold_604 275409..275571 -
EsuBft964_3a-0001-exonagat-exon-110582Ectocarpus subulatus male Bft15bexonScaffold_604 275805..275808 -
EsuBft964_3a-0001-exonagat-exon-110583Ectocarpus subulatus male Bft15bexonScaffold_604 276361..276656 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft964_3a-0001-exonagat-three_prime_utr-23559Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_604 272447..272642 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft964_3a-0001-cdsEsuBft964_3a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_604 272643..273144 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft964_3a-0001-exonagat-five_prime_utr-15326Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_604 276556..276656 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft964_3a-0001 ID=EsuBft964_3a-0001|Name=EsuBft964_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1440bp|location=Sequence derived from alignment at Scaffold_604:272447..276656- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GTTTGAACCAAATGCAATCAATATCACCTAGCAGTTCTACAGTCTACAAC
TTTAATGTACACCCGCCAGCATAATCCAGAAGCATTTTTACTTGCTGACT
AATGTACGCCCTTACGATACCATCTTCACGGTTGCCCACGCCGTATTCCT
ACTGCTTGCGTCACGAACTTGCATACAGGAGGGCACCTACGACGGGGAGA
CGAAGGGAGGCGTGCGTGAGGGCAGGGGGCGGCTTGTGTGGTCAAACGGG
GACACATACCTGGGAGACTTCCACAACGGACTCCGACATGGTCAAGAACG
GAGTTTTTGAATCGAAGCGAGGCATTCGGTACGAGGGCGAATGGCGCGTC
AGCCGCCGGCACGGCGAAGGGTCCCAGGAGTGGCCCAACGGAGAACGGTA
TAATGGGGGCTGGAGAAACGACACGCCGGACGGCCGAGGCACCTGGCTAA
AGCGCGGCGGAAGATACGCCGGTGATCTGCGGGAAGGGGTGAAGCACGGC
AAGGGTGTCCTGAAGCTGAGGAACGGGGGAGAGTATGACGGCCAGTGGGC
TCGAGGGCGGATGGAAGGCTTCGGGGTCTACATCTGGCCCGACGCCAGGA
TCTACAAGGGGGGGTGGGAGGCCGGCCTGAGGCACGGGGAAGGGACCCTC
TCTTTGCCATCCGGGGAGAGGTACAGCGGGCAGTGGAAGGAAGGGAAGAA
GCACGGGGAGGGCGTGTGGAGGTGGAGCAACGGACGAACAAGGCGAGGTG
AGTGGCACAACGACGTGCTGGTGGGCTGGACCAGCGCCGAGGTCTTCGGA
AACCAGCCCCCGAAGCTGATAACGGCGGGCGGAGGCGGCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGGCGGCGAAAGTAGCCCTAAACGACGCGGCCGCG
GGGACGACGGCAACAGCAAGAGCCTGAAGACTGCAGCGTCGGCCACCACC
GGCAACAAGAGCGGTGTTGGCACTGCTACGAACCCGGCGAGGGCGGGTGT
CAACAGCGGCAGTGACAACAAGAGCGGTAAACAAGAAGGAGCGAATCAAT
ACAACAACAGCAGTGGTGGTGGTAGTAGTAGTAGCAGTGGCCCGAACGGG
ACGGGAGGCGGCAGGAAGGCGTTGACGAAAGGAAGCGGCGTTTCGGGGAG
AGGGCCGACGGACGGCATCGGAGGGGGCAGCAGCAGCCCGACGACGGCGA
CACGGCGGGCAAACAATAGTAGTAGTAAAAGCCCGAAGCAGTAGCCCGTG
GGTTGTCGCTACTCTGCTGCATGGGTCCACTGGAGGGGTTGTAGTCAAGG
ACTGTAAGAAGTTACTTGCGTTGTTGTCGAGCTCAAGCTTCGCACTCTTC
GGAGGCGGTCGGCACCTGACGTTTGGTTTGCTAGGCCGACCAAGAGAGTT
GTTTTTCCGAGAAAAACAAATAAGACCACAACAACTGTCA
back to top

protein sequence of EsuBft964_3a-0001

>EsuBft964_3 ID=EsuBft964_3|Name=EsuBft964_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=380bp
MYALTIPSSRLPTPYSYCLRHELAYRRAPTTGRRREACVRAGGGLCGQTG
THTWETSTTDSDMVKNGVFESKRGIRYEGEWRVSRRHGEGSQEWPNGERY
NGGWRNDTPDGRGTWLKRGGRYAGDLREGVKHGKGVLKLRNGGEYDGQWA
RGRMEGFGVYIWPDARIYKGGWEAGLRHGEGTLSLPSGERYSGQWKEGKK
HGEGVWRWSNGRTRRGEWHNDVLVGWTSAEVFGNQPPKLITAGGGGGGGG
GGGGGGGESSPKRRGRGDDGNSKSLKTAASATTGNKSGVGTATNPARAGV
NSGSDNKSGKQEGANQYNNSSGGGSSSSSGPNGTGGGRKALTKGSGVSGR
GPTDGIGGGSSSPTTATRRANNSSSKSPKQ
back to top

mRNA from alignment at Scaffold_604:272447..276656-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft964_3a-0001 ID=EsuBft964_3a-0001|Name=EsuBft964_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4210bp|location=Sequence derived from alignment at Scaffold_604:272447..276656- (Ectocarpus subulatus male Bft15b)
GTTTGAACCAAATGCAATCAATATCACCTAGCAGTTCTACAGTCTACAAC
TTTAATGTACACCCGCCAGCATAATCCAGAAGCATTTTTACTTGCTGACT
AATGTACGCCCTTACGATACCATCTTCACGGTTGCCCACGCCGTATTCCT
ACTGCTTGCGTCACGAACTTGCATACAGGAGGGCACCTACGACGGGGAGA
CGAAGGGAGGCGTGCGTGAGGGCAGGGGGCGGCTTGTGTGGTCAAACGGG
GACACATACCTGGGAGACTTCCACAACGGACTCCGACATGGTCAAGGTAG
ACTACAGCTATTTTCCAACTGCTACTGGGTAGTATTTCTGTGGTGGTAGT
CTACCGACGACCCCCGACGAGGATGCACTTCGATGCTGCTTGCTGTGGCA
CAAGACATGGAAGAACGCGCTGAAAGAAGAGGGAAGGGAAACAAGGGACA
GAAGGACGAGAGGAAGGAGGGGCGGACGGAGGGAAGGAGGAGGGAGGGAG
GGAGGGAGGGAGTACGAAAATAGAGTAGGATGGGGTGTGTGCACTACAGA
CGCAGCGGAACACACACCACGAGACCACGCCACCCACGTCGACTTCCATG
CTCCGCAGAGAAGGGAAACCAAGGCCATGCTTGCCACAGTACATCAAATG
TTTGTTGCATACGGCAGGTTTCGGAACCACCTCCGTGCAAGACGTCATTC
CCCGCATCATCAGTCAGCCTTTGGATACACCCCTCTCATGGTAGCCTACT
TTGTTAATCGAGCCACGAAGCGTGGCCTGGGCTGCGACGAAAGCAGCGCG
AACAATCGGTTCCTGCACAATCTCGAAAATGTCCACAGCAGTGAGTAGAA
CGGTCGGAAAGGAGCGCAGCGTGCGCGTATCCCTCATTTCCGTCTTGCCG
TGCGGTGCCTCGTTCAAGACCTACATATCTCCACGTAACATTGATTGCGG
TTCACACCACCTTTCTGGATTGAGTTATGATTTAATGCTTGAGTCTTCAT
GGACTCACAAAGTTCATTCGATAACCATGACTACTTACACTGTAAACATA
CGATCACAACGGATTTCATGGTTGGCGTGAAGCAGGAGTTTTTGAATCGA
AGCGAGGCATTCGGTACGAGGGCGAATGGCGCGTCAGCCGCCGGCACGGC
GAAGGGTCCCAGGAGTGGCCCAACGGAGAACGGTATAATGGGGGCTGGAG
AAACGACACGCCGGACGGCCGAGGCACCTGGCTAAAGCGCGGCGGAAGGT
AATAGACTAATTGATGGGCTTCCGCCACCAAGACCGCTGACAACTTTTTC
TACAGCTTGTTGTGGTAGCCTCATCGTACGGGTTTTCGCTGCCCGCTTGT
ACCAGCATACCAGGCTTTTATCTTTGTTCGTTGGCGTTTTAGTCTGGTGG
TACACAGGGATAGTGCAAAGTCGGCCGGTTCTACGCCGCCGGTGTCGGTC
GACATTGGGGGGCTAACTTGCCACGGTAACGACGCGCCGCCTGAAAAAAA
CAGATACGCCGGTGATCTGCGGGAAGGGGTGAAGCACGGCAAGGGTGTCC
TGAAGCTGAGGAACGGGGGAGAGTATGACGGCCAGTGGGCTCGAGGGCGG
ATGGAAGGCTTCGGGGTCTACATCTGGCCCGACGCCAGGATCTACAAGGG
GGGGTGGGAGGCCGGCCTGAGGCACGGGGAAGGGACCCTCTCTTTGCCAT
CCGGGGAGAGGTAGGTCAGCCGGGCGGCTCTGTCGTGAACCAGTGTACAT
CGCGTTGCAACCAAGAGTCTTTAATTCACGAAGAAGGGGGAACAGGGGGA
CTATGCTATCGCTTGACTAACACACTACAATTATGGTCTTCATCCTGACA
GGAGACGCCCCTGGCAAGGCAGCACCCGTGGTGTGGGGTGTAGAGGCAGG
CAGGGCATGTCAGCCTGCAGTTTCTCGTCGGTGGGAGATGACCATTTGGT
TGTGCATACAAACGCGAGGGAAGAAAAGCAACAGCGTAGAATACAAGCGT
GGGTCGTTCTCTACTGGAAGCACTGGTGTCCAGAAGTTTTTTGAAACTGT
CATTCCAGAGACTGATCCAGAGACCAATGCAGTGGCTGATCCAGAGCCTG
GTCATCAGCGTGGGGAGGCAATCGATATGACAGCCACCTTTTCATGTGAA
CCACACCGGGTGTTTTGTATGCACCACACATTCCCAGCGGTTTGTGGCGT
ACACGCCTGTTGCAAGTGCCGCATTTGACGTGGCCCTCTGCGGCCAAGTT
ACATTTTCCCATCATCCACCTCGCGGGAAACTCTGTGGCTGTTTGTCTCA
AAACAACTGCGAACCCGACCTGGCTCCAAAACGATTGAACGAGCCGTCAC
GCACGCTCGATATTCAGGCAAATTATAAAAAAAACGGTTGGAGAGAGAAC
GGCAATGAAGTATCATCTGAAGACGTCGTGCCGTAGTTAGCAACAGACCC
AGGACGCCGCTACAGGCTGCACGCTGATGATTCTCGGTACACCGCAGAAT
GAACCACGTGCGGATCGGCGAACATGGTTGTTTGCACACGTGTGTGATGT
CACCTCTGTCTATCGTCTCGAACGAATATATCAGGTACAGCGGGCAGTGG
AAGGAAGGGAAGAAGCACGGGGAGGGCGTGTGGAGGTGGAGCAACGGACG
AACAAGGTGGCGTGTGTTGTGTTGGCGTGCACGGATGTTGAGGAAGACTA
GCACGTTGCCTGTAGTAAAAGCCCCGCAATGCATACGGCGGTACCGATAC
ACGCTTGTGCGGTTCCAAGCTGACAGCGTGGATCGATCCGGCAAGGGCAC
GGGTTTTTACCGTACCACCATATATTCTACCGCAGTGGTAGCAATTCGTA
GCGCGTCCAACAATTCTTTGCACAGCCGCTCGCGCGCATGTATGTATACC
CTCGTGCAGAAAGCTCTTCCTCGTGTTGGGAGGTGAGGCAGACAGCGCTG
TACTCTTGAGGTGCCCTATAATATCATAGCTGGCGGGCCCCTTCACGCTA
CATGAGCGCGTGGCGGACGAGGCGGGACCGAACCACTCGTGCTTACGTAG
GGCATGGTAGAATGCTGCTTGTTGGTACTGTGCACGAGAAATACTCCATA
GTAGTTCGAGTTTAGTCTTGCGCGTCATCGTAGCTGCTCGGGTGAGACAG
GGGCAGGTCGCAGAGAGAGGTAATGTTGCCCTAGGAATCAGATAGGCACT
ACGGCCGGAATAAGTGCAAGGAGGGACTGCTGCCACCAAGAAAAGGAACG
CATCTGCCAACATCACGGATTATCGGCGAGCGCATGGACACATCGCCTTC
GCGCAATGCCTCCCATTTCTCCTCCCCACGCCTCTACGCTTGGTTCCCTG
CCTTGTCTGGCCGGAGAACCCCCCATGCTGTACTCGCCCCGCCCCGGTTT
CGCCATGGAAACCTGCAGGGGTGGTAGGCGCTACGGCACTGAAGTTGCAC
CGACATGCTCACTACCATGAACACCCCCCGATCACCACCACCACCACCTT
TCCTTGCCACAGGCGAGGTGAGTGGCACAACGACGTGCTGGTGGGCTGGA
CCAGCGCCGAGGTCTTCGGAAACCAGCCCCCGAAGCTGATAACGGCGGGC
GGAGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGAAAGTAG
CCCTAAACGACGCGGCCGCGGGGACGACGGCAACAGCAAGAGCCTGAAGA
CTGCAGCGTCGGCCACCACCGGCAACAAGAGCGGTGTTGGCACTGCTACG
AACCCGGCGAGGGCGGGTGTCAACAGCGGCAGTGACAACAAGAGCGGTAA
ACAAGAAGGAGCGAATCAATACAACAACAGCAGTGGTGGTGGTAGTAGTA
GTAGCAGTGGCCCGAACGGGACGGGAGGCGGCAGGAAGGCGTTGACGAAA
GGAAGCGGCGTTTCGGGGAGAGGGCCGACGGACGGCATCGGAGGGGGCAG
CAGCAGCCCGACGACGGCGACACGGCGGGCAAACAATAGTAGTAGTAAAA
GCCCGAAGCAGTAGCCCGTGGGTTGTCGCTACTCTGCTGCATGGGTCCAC
TGGAGGGGTTGTAGTCAAGGACTGTAAGAAGTTACTTGCGTTGTTGTCGA
GCTCAAGCTTCGCACTCTTCGGAGGCGGTCGGCACCTGACGTTTGGTTTG
CTAGGCCGACCAAGAGAGTTGTTTTTCCGAGAAAAACAAATAAGACCACA
ACAACTGTCA
back to top

Coding sequence (CDS) from alignment at Scaffold_604:272447..276656-

>EsuBft964_3a-0001 ID=EsuBft964_3a-0001|Name=EsuBft964_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1143bp|location=Sequence derived from alignment at Scaffold_604:272447..276656- (Ectocarpus subulatus male Bft15b)
ATGTACGCCCTTACGATACCATCTTCACGGTTGCCCACGCCGTATTCCTA
CTGCTTGCGTCACGAACTTGCATACAGGAGGGCACCTACGACGGGGAGAC
GAAGGGAGGCGTGCGTGAGGGCAGGGGGCGGCTTGTGTGGTCAAACGGGG
ACACATACCTGGGAGACTTCCACAACGGACTCCGACATGGTCAAGAACGG
AGTTTTTGAATCGAAGCGAGGCATTCGGTACGAGGGCGAATGGCGCGTCA
GCCGCCGGCACGGCGAAGGGTCCCAGGAGTGGCCCAACGGAGAACGGTAT
AATGGGGGCTGGAGAAACGACACGCCGGACGGCCGAGGCACCTGGCTAAA
GCGCGGCGGAAGATACGCCGGTGATCTGCGGGAAGGGGTGAAGCACGGCA
AGGGTGTCCTGAAGCTGAGGAACGGGGGAGAGTATGACGGCCAGTGGGCT
CGAGGGCGGATGGAAGGCTTCGGGGTCTACATCTGGCCCGACGCCAGGAT
CTACAAGGGGGGGTGGGAGGCCGGCCTGAGGCACGGGGAAGGGACCCTCT
CTTTGCCATCCGGGGAGAGGTACAGCGGGCAGTGGAAGGAAGGGAAGAAG
CACGGGGAGGGCGTGTGGAGGTGGAGCAACGGACGAACAAGGCGAGGTGA
GTGGCACAACGACGTGCTGGTGGGCTGGACCAGCGCCGAGGTCTTCGGAA
ACCAGCCCCCGAAGCTGATAACGGCGGGCGGAGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGGCGAAAGTAGCCCTAAACGACGCGGCCGCGG
GGACGACGGCAACAGCAAGAGCCTGAAGACTGCAGCGTCGGCCACCACCG
GCAACAAGAGCGGTGTTGGCACTGCTACGAACCCGGCGAGGGCGGGTGTC
AACAGCGGCAGTGACAACAAGAGCGGTAAACAAGAAGGAGCGAATCAATA
CAACAACAGCAGTGGTGGTGGTAGTAGTAGTAGCAGTGGCCCGAACGGGA
CGGGAGGCGGCAGGAAGGCGTTGACGAAAGGAAGCGGCGTTTCGGGGAGA
GGGCCGACGGACGGCATCGGAGGGGGCAGCAGCAGCCCGACGACGGCGAC
ACGGCGGGCAAACAATAGTAGTAGTAAAAGCCCGAAGCAGTAG
back to top