EsuBft961_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft961_4a-0001
Unique NameEsuBft961_4a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_82contigScaffold_82:213060..223118 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G873
ProteomeIdEsuBft961_4
Protein domainsIPR002048
Protein domainsTMhelix
Protein domainsSSF47473
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsIPR011992
Protein domainsCYTOPLASMIC_DOMAIN
Protein domainsTRANSMEMBRANE
Ownerapollo_admin@sb-roscoff.fr
Notetwo pore calcium channel protein 1 os:oryza sativa japonica gn:tpc1 pe:1 sv:2 [Automatic annotation]
Nb exon13
Max annot lvl2759|Eukaryota
Length2592
Evalue1.52e-109
EggNOG OGsCOG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
KEGG rclassRC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496
KEGG koko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437
KEGG ReactionR00851,R03875,R03938,R04866,R04867,R09380
KEGG Pathwayko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202
KEGG ModuleM00089
EC2.1.1.43,2.3.1.15,3.6.4.12
Descriptionacetylation-dependent protein binding
COG categoryBK
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036
Cross References
External references for this mRNA
DatabaseAccession
GO0005509
GO0044699
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft961_4aEsuBft961_4aEctocarpus subulatus male Bft15bgeneScaffold_82 213060..223118 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft961_4a-0001-exonagat-exon-89186Ectocarpus subulatus male Bft15bexonScaffold_82 213060..213584 +
EsuBft961_4a-0001-exonagat-exon-89194Ectocarpus subulatus male Bft15bexonScaffold_82 214426..214559 +
EsuBft961_4a-0001-exonagat-exon-89188Ectocarpus subulatus male Bft15bexonScaffold_82 215239..215527 +
EsuBft961_4a-0001-exonagat-exon-89189Ectocarpus subulatus male Bft15bexonScaffold_82 215575..216070 +
EsuBft961_4a-0001-exonEsuBft961_4a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_82 217328..217435 +
EsuBft961_4a-0001-exonagat-exon-89195Ectocarpus subulatus male Bft15bexonScaffold_82 218301..218585 +
EsuBft961_4a-0001-exonagat-exon-89192Ectocarpus subulatus male Bft15bexonScaffold_82 218804..218831 +
EsuBft961_4a-0001-exonagat-exon-89191Ectocarpus subulatus male Bft15bexonScaffold_82 219009..219165 +
EsuBft961_4a-0001-exonagat-exon-89190Ectocarpus subulatus male Bft15bexonScaffold_82 219612..219832 +
EsuBft961_4a-0001-exonagat-exon-89184Ectocarpus subulatus male Bft15bexonScaffold_82 221155..221200 +
EsuBft961_4a-0001-exonagat-exon-89187Ectocarpus subulatus male Bft15bexonScaffold_82 221694..221770 +
EsuBft961_4a-0001-exonagat-exon-89185Ectocarpus subulatus male Bft15bexonScaffold_82 222558..222635 +
EsuBft961_4a-0001-exonagat-exon-89193Ectocarpus subulatus male Bft15bexonScaffold_82 222971..223118 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft961_4a-0001-cdsEsuBft961_4a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_82 213060..213584 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft961_4a-0001EsuBft961_4Ectocarpus subulatus male Bft15bpolypeptideScaffold_82 213060..223118 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft961_4a-0001 ID=EsuBft961_4a-0001|Name=EsuBft961_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2592bp|location=Sequence derived from alignment at Scaffold_82:213060..223118+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGGAAGGGGCATGGGGCTCCTACCAAGAAGGGGGGGGGCGCCGCAA
AAGGGACGGCGAGAGAGTGCCCCTCGCCCCTTCCAGCGGGCAGCACGCTT
CCGGGGGCGCCACGGACGGGGCTACTACCCCCGTAACAGGTGGCGGCAGC
GGCGGCGGCTCCACCTCACGGAGCCCCCAAAACATTCTCTCGCGTGGCGA
CAGCGGCCTCAGATCTCGCGAAGCAGTGCTTCGCTCGTCGCCAAAGAAAG
GCTTTCTCCGGGGTATGATGTTGCCGCCCAGGCTGAAGATGAAGCATCAG
GGCGGGGGAGACACGGCAACGACGGCGGCGGCGGCGGCGGCAGCGGCGGC
AGCGGCGGCGGCGGAGCTGGACTCGTCGACATCGCCGAGGAGAGGGAGGG
CCATGACCTCGATGGAACCGTCGGACGAGGCGGACATGCGGAGAAGGGCC
GGGCGGTCACCGTTGTGGGCTCTCGAGCGGAGATCCAGCGCTTCGGGCTA
CGAGGGCTTGCCGGAGATGCCGAAGTCGTTGCCGAGCAACGCCGACTCCT
TCGAGGCCGTGCATCCGAAACGAAGCAGGAGCGTAAGAGTAGCCGGGATG
AGCGAGGAGGACGCTCTGACGCGGGCCATCACTTGCCTCGAAGACGCCCT
AGGGTACAGGAGGTGTCCGTTAGCAAACCGTGACCATGCGGCTACAACGT
GTTTCCTCCCAACCGCGATGCTCGTAACTCGCCTCCCTCACCTCCACGTT
CTTTCGCTACCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGATGGCAGCGGCCAAGAAAATACTAGGAT
GTTCAAGTACAACGAGCAACACTGTATTGAGAGCAGAACTGGGAATATAC
TCTCTTAAAACAAAGAGAGACATGCAAAAGTTGAATTGGCAGTACAAGGC
AGCTTGGGGAAAAGCGACTCCAGGGAAGAAAGGAATCAGATGGGACAAGG
TGGTAGAGAGGGTTTGGAAGGAGATAGGAGACGAGGAGGAGACATTGGAC
ACGGAAGGGTTTGGGGGGTTCAAGAAGAAAGTCAAGGACATGCTACAAAG
TAGGGAGGAGGCAACCCTTCGGAAGAAGTTACGAAGCGAAGAGCACTTGG
AGACATACGGGAAGCTGAAAGAAGGGATAGGGATGAAGAGTTACTTGGAC
GGCCCCATGGACTACGCAAAAAAAATGAAGGTGCAATTTCGAGTAGGCGA
TCTGGACTTGCCAGAACGGAGGAAGAGGTACAGCAGCCGTAGGAGAGAGG
AAGAGGAGGTTAGACAGACATGTCCATGTGGCAAATCGGAGGAGAGTAGA
CCCCACATAGTTGGGGAGTGTGAGCTGTACAGGAAGGAAAGAGAGGATCT
CGAGGAGGACATGAGACAGAGAGGGTGTGACATGGACAAGTTTGGGAAGA
CATTTTTGAGCCACCTTTGGCAAAGTAGGAAGGAACGATTGGCCATCGGT
GATCGGTCCTGTGGGAACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAA
TGATCCACACTACTACAGCGACCCCGCGAGCATCCGGAGCTACCGGCTGC
GGCAGAGCCGCGCCTGGCAGTCGGGCACCTCGCTGGCTGTGGTGGCGTAC
ATCGCGGCGTGCTTCTTGGGCAAGCCGCCCTTCTCCGCGGACTGGGGCGG
GATGCCGCCCCTCTCGGCCCTGCAGGGGGAGATGGGCCAGACGTGGGGGC
TGTTCCTCGAGTGCGGCTGCGTGGTCTTCTTCGCGTTCGACATGTACTTG
CTCTACAAGTGGGTCGTCTTTTTTTGTTTTCTTTCCCTACGCGCCATCAC
TCAACACATTGTCAGGTGTGTGGGGTTCCGATCGATCGTAACCTGCTGGT
GGCAGGCAGCGTTCCTTTTGTCCCTCGTTTTCTCCGTGACAGACTTGGGG
AGTCGGTGGTACACGCATCGGCCGTGGAGCCGTGTGTTTCGCCCCGCGGT
GTTTTTCTTCGTGGGGCCCAAGGTCCGGAACAACTCCCTCTCCACCCTCC
ACGCGGTGAGCGCGCTGCTGCCCGTCCTCGTGCTGGAACTGCTGGTCACC
CTCGCCTACGCTTGTGGGTGCGTGGTTCTGTACCACGGTGTGAAGGACGC
CCCGTTTACTACCCTCGGCAGCGCGTTCATGAACCTCTTCGCGCTGTCCA
CGACGGTCAACGACCCGGACGTGTGGATGCCGCTGTACGACAGGAATCGC
GCTAACGTGTTGGTGTTTGTATCGTTCCTGGTGGTGCAGGTGTGGAACGA
GTTTGGTGAGCGCATGAAGATCTACGCCAGGCAGAAGAGGATGTGGAGGG
AGGAGAGCGTAAGAAGGGCTTTCGAGGCGTTGGACCAGGAGGGGACGGGC
CACGTCACGCGAGAAAAGATCATGAAACTGCTCAAGACGATCAGGCCGCA
CTACGGCGAGTCTAAGCGGTACATGATGTACGAGAGGATCGTGCAGAGCG
CCAACCTCCGCGGCAGGCCCGCCCAGAGGAGAGGCAGGGCTGAGAAGGAG
TATGAGGCGGCCGAAGTTACGCAGGTACCTCTACAGAAATGA
back to top

protein sequence of EsuBft961_4a-0001

>EsuBft961_4 ID=EsuBft961_4|Name=EsuBft961_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=863bp
MREGAWGSYQEGGGRRKRDGERVPLAPSSGQHASGGATDGATTPVTGGGS
GGGSTSRSPQNILSRGDSGLRSREAVLRSSPKKGFLRGMMLPPRLKMKHQ
GGGDTATTAAAAAAAAAAAAAELDSSTSPRRGRAMTSMEPSDEADMRRRA
GRSPLWALERRSSASGYEGLPEMPKSLPSNADSFEAVHPKRSRSVRVAGM
SEEDALTRAITCLEDALGYRRCPLANRDHAATTCFLPTAMLVTRLPHLHV
LSLPPPPXXXXXXXXXXXXXXXXXMAAAKKILGCSSTTSNTVLRAELGIY
SLKTKRDMQKLNWQYKAAWGKATPGKKGIRWDKVVERVWKEIGDEEETLD
TEGFGGFKKKVKDMLQSREEATLRKKLRSEEHLETYGKLKEGIGMKSYLD
GPMDYAKKMKVQFRVGDLDLPERRKRYSSRRREEEEVRQTCPCGKSEESR
PHIVGECELYRKEREDLEEDMRQRGCDMDKFGKTFLSHLWQSRKERLAIG
DRSCGNNAPSSRGRVVNDPHYYSDPASIRSYRLRQSRAWQSGTSLAVVAY
IAACFLGKPPFSADWGGMPPLSALQGEMGQTWGLFLECGCVVFFAFDMYL
LYKWVVFFCFLSLRAITQHIVRCVGFRSIVTCWWQAAFLLSLVFSVTDLG
SRWYTHRPWSRVFRPAVFFFVGPKVRNNSLSTLHAVSALLPVLVLELLVT
LAYACGCVVLYHGVKDAPFTTLGSAFMNLFALSTTVNDPDVWMPLYDRNR
ANVLVFVSFLVVQVWNEFGERMKIYARQKRMWREESVRRAFEALDQEGTG
HVTREKIMKLLKTIRPHYGESKRYMMYERIVQSANLRGRPAQRRGRAEKE
YEAAEVTQVPLQK
back to top

mRNA from alignment at Scaffold_82:213060..223118+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft961_4a-0001 ID=EsuBft961_4a-0001|Name=EsuBft961_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=10059bp|location=Sequence derived from alignment at Scaffold_82:213060..223118+ (Ectocarpus subulatus male Bft15b)
ATGCGGGAAGGGGCATGGGGCTCCTACCAAGAAGGGGGGGGGCGCCGCAA AAGGGACGGCGAGAGAGTGCCCCTCGCCCCTTCCAGCGGGCAGCACGCTT CCGGGGGCGCCACGGACGGGGCTACTACCCCCGTAACAGGTGGCGGCAGC GGCGGCGGCTCCACCTCACGGAGCCCCCAAAACATTCTCTCGCGTGGCGA CAGCGGCCTCAGATCTCGCGAAGCAGTGCTTCGCTCGTCGCCAAAGAAAG GCTTTCTCCGGGGTATGATGTTGCCGCCCAGGCTGAAGATGAAGCATCAG GGCGGGGGAGACACGGCAACGACGGCGGCGGCGGCGGCGGCAGCGGCGGC AGCGGCGGCGGCGGAGCTGGACTCGTCGACATCGCCGAGGAGAGGGAGGG CCATGACCTCGATGGAACCGTCGGACGAGGCGGACATGCGGAGAAGGGCC GGGCGGTCACCGTTGTGGGCTCTCGAGCGGAGATCCAGCGCTTCGGGCTA CGAGGGCTTGCCGGAGATGCCGAAGGTGATGGAGGCGTTTTATTAGGAGC AGATAGGCGGCAACGCGCTTCAGAGTACAGCAGTTAGGCCACAGCAACGC CGGTATGTGCCCGGCGAATCGACCGGTGCTAATCTGAGCGACTCGCGCTA TTCGAAGTGTAGAATGACTTCGTCATTCAGTCTGTGCCCAGCCAATTTTC GCCGGCACCACATGCAGCCGGCGTTGTTTGGCCCCAATCACTTTAACCCC CGTTGACCCACCTTTGAAAAAGTACATGACAAGGAACGATTGGCCGTCGG CGAACGGTCCCGTGGGAGAAACAATGAGTCGTCCTCTCGAGGACGCGTGG TAGATGGTCTAGCGACTGCGGGAGTGCGCCTCCCCCCAATCAACCCATAA CATGTCTGGTTGACGCAGCAAGCGCAAAGGAGGACGCCCCACCTCTGGTT CGTTGTCATGAACCATAACCTGGGCCGGCGGAAACCCGGCATATTCGCTG CTCCGTCCCGGCATTGTAGGAATGCGAAATCTACAGTCTAACGACCACGG TAGGCGGTTACATGAGAGTGCCCCCCCCCCCCCGAACAGGGCGGTGTTTG TTTTGTCCGTCAAAAGTCCCTTGGAAGAAACTGGGTTGTCCGGTGGTTGG TCTCGTGCGCTTTTGCTTCGGATCCCTTCCAGATTGGGAGGGCGTTGACG GACGGGGAGCTTTCTCTCATGTTAGATTAGAACGTAAACATTATCTCCCA GAAAGACCACAAACTCACCCATGAGAGATATTACCACAGTTCGGAAGGGA TGTGCTGACGTCTTTCACGCATCGCGGCCCTTCTCTGCGAACGCCTTGTT GTCTGCCGAAACCCAGTCGTTGCCGAGCAACGCCGACTCCTTCGAGGCCG TGCATCCGAAACGAAGCAGGAGCGTAAGAGTAGCCGGGATGAGCGAGGAG GACGCTCTGACGCGGGCCATCACTTGCCTCGAAGACGCCCTAGGGTACAG GTGAGGGAGGACAACGCCATTTGACCGCAGCCCTTTGACCATGGCCATCT GTCGTGTGCGAAAGACGCTCTCTCCGGAGTGTTTTGACAAGACTGAACTT GAAAATGAGGGGATCGCGAGGAGATACGGACAGCACCTTCACAAAGGGAT ACAATCGTCGCAACACCTGTCCAGGACCATTCCCTCCTTTTGAATACCCG TCGTTACTTTCGATGAAGACGCTTGCCACGGTGAAGATGTGAAAGGCCCA GGTCCTGACATTCGAAAGCTTTTTCCCGGTTGTAGGGAGGGATGCCTGTG TAGCCCTAATTGTGCGCCTTGATGCTCTCTCCGCGCCATTGAACAGCTCT AACCCTTACACTGATCTCCACTTTGCTCTTGCTCGTATAGATAGAGTGAG TGGGCCGCAGCTTAATCCTCGAAAACCTTTTTTTATGCTTGACGATTCTA GTGAGGCTATACGCGAGGATGACTCTGTGTAGCCTTGTACTAACAACTGC TTGTGCTTGAAGATAAGGGTGACGGTACTGCTTTCCCGTAACTGCTGTCA TCCCTTTGTCGCTCTCTAGACTACAAATAAGGGTATCAACTGACCCTTAC CCTGACCCTCTCTGCGGTGCTTCCAAGACCTTGTCTAGGCTGCGGGCAAC CCAAAGCCCGTATTTCGATAAGCCATCAGGAGGTGTCCGTTAGCAAACCG TGACCATGCGGCTACAACGTGTTTCCTCCCAACCGCGATGCTCGTAACTC GCCTCCCTCACCTCCACGTTCTTTCGCTACCCCCCCCCCCCNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGGCAGC GGCCAAGAAAATACTAGGATGTTCAAGTACAACGAGCAACACTGTATTGA GAGCAGAACTGGGAATATACTCTCTTAAAACAAAGAGAGACATGCAAAAG TTGAATTGGCAGTACAAGGTAAGTAGAATGTCGGACGATATAGACTACCA GCCATGGTTGAAAAGGCAGCTTGGGGAAAAGCGACTCCAGGGAAGAAAGG AATCAGATGGGACAAGGTGGTAGAGAGGGTTTGGAAGGAGATAGGAGACG AGGAGGAGACATTGGACACGGAAGGGTTTGGGGGGTTCAAGAAGAAAGTC AAGGACATGCTACAAAGTAGGGAGGAGGCAACCCTTCGGAAGAAGTTACG AAGCGAAGAGCACTTGGAGACATACGGGAAGCTGAAAGAAGGGATAGGGA TGAAGAGTTACTTGGACGGCCCCATGGACTACGCAAAAAAAATGAAGGTG CAATTTCGAGTAGGCGATCTGGACTTGCCAGAACGGAGGAAGAGGTACAG CAGCCGTAGGAGAGAGGAAGAGGAGGTTAGACAGACATGTCCATGTGGCA AATCGGAGGAGAGTAGACCCCACATAGTTGGGGAGTGTGAGCTGTACAGG AAGGAAAGAGAGGATCTCGAGGAGGACATGAGACAGAGAGGGTGTGACAT GGACAAGTTTGGTAAATAAGACAACAGCGAAAAAACGATCGCGGTAATTG GGGATAGATGGTGGGCACAAGAGGCCGTAGAGGACGGGGATAAGATGTGC AAGAAATTTTTATGTAGTTTGTGGCAGAAACGTAAAGAGCTCCCAAATGT TGGTGGTGTCTCTAGTAGGGGTAGGAACGGTGCTCCGTCTCGAAAGGGAC GCGTGGTCAATGGTCAAATGACTACGGCAAGCAACAAATGAGTACGTCCC CCCCCCCCCCCCGTTTGTTTTTTTTGGCGGTAACCATAATGGTGGTCGAG TAGATCATGTTGTGCGGGGTCGAGAACCCTCGCTCCGCGCAAGGGGGATG ATCGCACCACGTTGTGTTAAAATGGTCAAGCACCCTCGAGGCAGTTACAC AGTGCTTACAACTGTCTCTGGAAGTGAAAGCACCAGAAAATAAATTAATT CATACGCAGCTGTCATCCGTACGCAAGGAAGTAAGCACAAGATGCCGAAC ACCCTTAACAGGATGCAGCGCACCCTTCATGCGACTCGCCGAATATCTCA CGGCGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGC GTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTA CGGCATGCACGACTATGAGTACACCCCCCCTCCGACGTGATCGCCGTGTG TGGCGCGTCTGCTTTGAACGAGCGCACAAAGATCGACGTGCAGTCGTGCC TGCCAAATGTGAAAATATTTTGTTAGCCGTGATGCCCCGTCGACCCACGG CATATCTGGTTTGGCATCGCAAATGGCAAGGATAATGACCAGCTCCTCGT TCGTCCTTGCGGAAGGTACCGTAGATGCACAAGATAACACACCCACCCCC TGGAGGACCAATATTCAAAGCTCGATTATGCGACAACGAAGAGGATGCAT AAGTGGAACAATACATTTTCGGAAAGCTATAGACGACACAGCTTCAAATC CACCGTTTTCCACGCTGTAACTCTTTCTGCTGTCGAGAAATCGAGATTTG AAAAATCGGCCAGGGGGTGTGTTATCTTGTGTCATCTACGGTAGCCTGGG CCGGCGAACACCCGGCATATCGCTCCTCCGTCCCGTAGTTGCAGGGATGC GAGGTCAATAGTCTCACGACTGTACGACACGCATTTACATTAGTACCCCC CCCCCCCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG TTAGGATAGACAGACTAGGGAAGACATTTTTGAGCCACCTTTGGCAAAGT AGGAAGGAACGATTGGCCATCGGTGATCGGTCCTGTGGGAACAATGCTCC GTCCTCTCGAGGACGCGTGGTCAATGGTCTAACCGCTAAGACATGCAAAA CATAAGAGTCCGCCCCCCCCCCCACCCCCCCCGGTGTTTACCATCGGGGT TGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAAGCCATCGGGATTGGGT TTTCGTCGCTTGGTGATTGGGTTTTNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNCCCCCCCCCCCCCCCGGTACCGTGCCCCCCAGAGATCCACACT ACTACAGCGACCCCGCGAGCATCCGGAGCTACCGGCTGCGGCAGAGCCGC GCCTGGCAGTCGGGCACCTCGCTGGCTGTGGTGGCGTACATCGCGGCGTG CTTCTTGGGCAAGCCGCCCTTCTCCGCGGACTGGGGCGGGATGCCGCCCC TCTCGGCCCTGCAGGGGGAGATGGGCCAGACGTGGGGGCTGTTCCTCGAG TGCGGCTGCGTGGTCTTCTTCGCGTTCGACATGTACTTGCTCTACAAGTG GGTCGTCTTTTTTTGTTTTCTTTCCCGTACATCGGTTGCGTGCAGAAGGT TCACCCCACGTATCACCAGAGTTGATGGCGCTTAAACGCGTTCAATAACC AATCAGAGGCGTTGTCGTGGAAATTGTGTGGTGAAGGGCGTGGCATCCAA AGCAACCCCTCAACAGATCTGAGATTAAACGTGGTGTATGAGGGCAAGAT CTTGAGCGGTGCAATGACTTTTAGCCAACTATGGTCCCTTACAGTACGCG CCATCACTCAACACATTGTCAGGTAAGAACGCGAGCCCACATCAAAGCTC GAGATTCGTTGCATGACAACTTCATATTCGCGTTGCCACCCACCCTTGTA CACTTCAATCCACTGTCCTGTGCTGACGTCCTCACTACTGTCGCACCCAG CATCTCGTTGCCATCGCCGACGGTAACCCGCTATTTCGTGCACTCGCAGG TGTGTGGGGTTCCGATCGATCGTAACCTGCTGGTGGCAGGCAGCGTTCCT TTTGTCCCTCGTTTTCTCCGTGACAGACTTGGGGAGTCGGTGGTACACGC ATCGGCCGTGGAGCCGTGTGTTTCGCCCCGCGGTGTTTTTCTTCGTGGGG CCCAAGGTGCGTTATTGTTATTGTTAATGTTGTTGTTGTTGGTGATGATG GTAGTCGTGATGATGTTCTTGTTGTGATGTTGGTGATTATGTGATTGGTG GTGATGTTGTTGTTGTTGTTGCTGTTCTTGTTCTTGTTCTTGTTCTTGTG ATGATGTGTTTGTTGTGATGTTGGTGATTGTGTGATTTGTGGTGATGTTG TTGTTGTTGTCGTTGGTAGTAATGGTGGTGGTGATGTTGTGGTGACGTCG TTGTTGTTATTGTTGTTGTTCTGTCGGTGATGATGTGCTTGTTGTGGTCG TGTGGTTGTTCGAACACGCCAAAACAGCTGTCGAACACGGGGAGTCGTGG TAGCGATAGCTCTGACGCCTCCCTGCCCTGTGAGATAAGGCAGCGCTGCC TCCTCTACTTCCACCAACATCTACACACCCACTGTACCGCCACCGACCTT AGGTCCGGAACAACTCCCTCTCCACCCTCCACGCGGTGAGCGCGCTGCTG CCCGTCCTCGTGCTGGAACTGCTGGTCACCCTCGCCTACGCTTGTGGGTG CGTGGTTCTGTACCACGGTGTGAAGGACGCCCCGTTTACTACCCTCGGCA GCGCGTTCATGAACCTCTTCGCGCTGTCCACGACGGTCAACGACCCGGAC GTGTGGATGCCGCTGTACGACAGGTGCGCTCTCGCATGGATCAATCACAA CCGCCCTCGTGCCATGTTTTCATGGCGTTCGGGGTTGGTTTTGTGTGGAG CACGACGTGTAGATGCCGCTCTGCGATGGGTGCGCTCACATGATTCAATC ACAAACGCCACCGTTGTGTGCAGTGTCTTTTGGTTGCGCTTGGAGTTACT TGTGAGTTGATCACAACTTGCGGGTGTCGCTATGCGATAGGTGCGTTCGC ATGGATCACAACCACACCTAGTGTTGTCTTTCGAACGCGTTTGGAGTCAG TTGCGTATGGATCAACACCACCTGTGGGATGTCTTACTTATGGTGGCATC TGGGAGTTTCATGCACATCGTCTCACAGGTGCGCTTCAATCACAACCGCA GATATGCCTTACGTTTTGGTCGTATATGGAACCTCAACCACCGTATGGGT TATCCCATGAAGGCAAGTGGAGTTGGGTAAGCATCATCTCGTGTGTTCTG AAAGTCCCGCACATGGCATGTGAGAGAGTTATGCCGCTGCTCACTTCTGG CCATTGATTGTTTTGCCTACATTTTTTGGATTTCCTCCTTTGGTGGGTAG TGATTTCAAGAGTGATCCTTGCACCTTACGCTTCTGCTAATTCAAATACC GTGTATGACACAAGATAACACACCCCCTGGACCAATTTTCAAAGCTCGAT TACTCCACGACGAAGAGGATGCATAAACGAAACGATACATTTTCGAAAAG CTCTGGACGAAACCGTTTCAACGCCGCCGTTGTCGGCGCTGTGACTGTTC CTGCAGATGAGAAATCGAGCTTCGAAAATCGGTCAAGGGGGTGTGTTATC TTGTGTCACATACGGTAAACCGGCCCCCGTCCCGGCTTGGTATGGATGAG AGGTAAATGGGCTAACGACTACGGCATGCACGACTTTGAGTACACCCTCC ACAGGAGTCGCTGCGTTCTCTCGAGGACGCTTGGTCAATGGTCGAACAGC TAAGGCTTGAGAAACACAAGAGTACGCCCCCCACGGACAAAACACAGATT TGCACGCCCCGCACCGCAATGTGCAACAGTTTTATTGTTCGTCGCTCTCT CACCTCTCTGACGCTGCCCTGCTGCACCCCTCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC CCCCCCCCGTTCCCTCGGCGCCCTGACGTGGTCGTGGCAACGCAGGAATC GCGCTAACGTGTTGGTGTTTGTATCGTTCCTGGTGGTGCAGGTGTTTCTA CTCCACAACATTTTGCTCGCCTCTGTGAGTGGGCGGACAGACTCGGCGTA AAGACCGCTGGTCAATGCATTGCCAGTCTTTGGGTCTACTCTCAGTTTCG TATCTGAGCGACCACCATTGAGTCTAGGCTACGCACTTCGTGTGTGNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGTGTGTGGG GGGGGGGGTCGTAACATAGGCGCAGTCTAAGGGGGTGGGCTTCGGGGAGA AAGTAGGGGTAGGATCTACCGTGGAGCTGTGTTTGTTAATGCGACCGTTG CTTGTTTCTTTTCGGGGGCATCGTCGATGCTTGGTACTCCTAGCTTGCTT GTGTTCATTCATGGCAGTCCCCCGTAAGTGCACGTTGTACGTTTTTCTTA AGAAGTATGCATAACCTCACAGAAAGACCACTCGTCCAAGACATAACCAA TCTTCCATTGATAAACCGGTGTGCTGCTGTGTAGGTGTGGAACGAGTTTG GTGAGCGCATGAAGATCTACGCCAGGCAGAAGAGGATGTGGAGGGAGGAG AGCGTAAGAAGGTGAGCCGGTGACTTCCAACAGCAAAGCGAATGCAATAG GACCGAACGCGCAACCGCTTTCGTCTACGACCTCCTTCTGGCGACGTCAC CATTTCATTGCCAAAGAGGGATACACACACCCCACACCTCCATGTCGACA GCTCGATCATGCTCGTTGGTGTGTACCTGGTATGCTGCCATCTATGACCC CGCCAAGGGCAGGACGGAAGTGCGCGGGGCCTACGTTGTAGAAAGTGGTG ATGGCCTGTGTCCCTAGTGGTTTGTGAAGAAAACATTGTTGTTGTTGTTG GTTGTTCACATTGAACAACCGTTCCGGGCTCTGCCCAGTGCGTTCCAACA TCCACACCCATCTGCGGCCTCGACAAGGGTACTAATTACCTACCACCCAC AAGACAGAGAAAGGACTCAGAAAACGGTGACACAAATGCGATATTTCGAT TGGCCGCTAGTCGTTTTGGGTGTGTTTCGTTGGCCGCGGCCAAGGAGTCC TTTCCCGCCAAGAGCCAAGCATGTTACTGACGGAAAAACGGGTGCTGTTT TTGAGTTGTGCGGGAGCACGCGTCGTCAAGACTTCGAACATCGCACGACA CACCAAATGTTCTTTCTCAGCGCGGAGTGACATACTGGGCGTGGACCCCT GCCCAGGGCAGGAGGCCTCGTCCAATCCAATGCTTACATTAAATGATCCT CGGTATGGAGACCATAGCAAGAACATCGGCACATCGAGTTTTGGCTACAA CGTTGGTTCGCGGTTGCTGTGGCTGCTCCTCGCGCGGGGCGTTCACAGGG CTTTCGAGGCGTTGGACCAGGAGGGGACGGGCCACGTCACGCGAGAAAAG ATCATGAAACTGCTCAAGACGATCAGGTATCACGGCGAGAGTCTCCCAAG TGTAGAGGTTCACGGTGCGATTTTCTATGGAAGTGCTTTACCGTACCGTC GGCTGCCCATGGTATAGTATTCCTGACGTGTGATCAGTGATGCGTTAATG TTTGCGATGGTGGTAGAATGATGGTCGTTGCTTGAGACATCTCCCCGCCT TGTATGGTGGTCCTATGTGTATTCATTGGTCCAGAGTCGTCACCATTCAA ACGACGTCAATCTCGGTGCGATATGTGTGTGTGCGCGTGCTTACGAGCAT CGACCGCGCCAACCCTAGTGACCATTCAGTGCGGTGTACCTGTGTGTGTT ATTGGGCGCAGGCCGCACTACGGCGAGTCTAAGCGGTACATGATGTACGA GAGGATCGTGCAGAGCGCCAACCTCCGCGGCAGGCCCGCCCAGAGGAGAG GCAGGGCTGAGAAGGAGTATGAGGCGGCCGAAGTTACGCAGGTACCTCTA CAGAAATGA
back to top

Coding sequence (CDS) from alignment at Scaffold_82:213060..223118+

>EsuBft961_4a-0001 ID=EsuBft961_4a-0001|Name=EsuBft961_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2592bp|location=Sequence derived from alignment at Scaffold_82:213060..223118+ (Ectocarpus subulatus male Bft15b)
ATGCGGGAAGGGGCATGGGGCTCCTACCAAGAAGGGGGGGGGCGCCGCAA
AAGGGACGGCGAGAGAGTGCCCCTCGCCCCTTCCAGCGGGCAGCACGCTT
CCGGGGGCGCCACGGACGGGGCTACTACCCCCGTAACAGGTGGCGGCAGC
GGCGGCGGCTCCACCTCACGGAGCCCCCAAAACATTCTCTCGCGTGGCGA
CAGCGGCCTCAGATCTCGCGAAGCAGTGCTTCGCTCGTCGCCAAAGAAAG
GCTTTCTCCGGGGTATGATGTTGCCGCCCAGGCTGAAGATGAAGCATCAG
GGCGGGGGAGACACGGCAACGACGGCGGCGGCGGCGGCGGCAGCGGCGGC
AGCGGCGGCGGCGGAGCTGGACTCGTCGACATCGCCGAGGAGAGGGAGGG
CCATGACCTCGATGGAACCGTCGGACGAGGCGGACATGCGGAGAAGGGCC
GGGCGGTCACCGTTGTGGGCTCTCGAGCGGAGATCCAGCGCTTCGGGCTA
CGAGGGCTTGCCGGAGATGCCGAAGTCGTTGCCGAGCAACGCCGACTCCT
TCGAGGCCGTGCATCCGAAACGAAGCAGGAGCGTAAGAGTAGCCGGGATG
AGCGAGGAGGACGCTCTGACGCGGGCCATCACTTGCCTCGAAGACGCCCT
AGGGTACAGGAGGTGTCCGTTAGCAAACCGTGACCATGCGGCTACAACGT
GTTTCCTCCCAACCGCGATGCTCGTAACTCGCCTCCCTCACCTCCACGTT
CTTTCGCTACCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGATGGCAGCGGCCAAGAAAATACTAGGAT
GTTCAAGTACAACGAGCAACACTGTATTGAGAGCAGAACTGGGAATATAC
TCTCTTAAAACAAAGAGAGACATGCAAAAGTTGAATTGGCAGTACAAGGC
AGCTTGGGGAAAAGCGACTCCAGGGAAGAAAGGAATCAGATGGGACAAGG
TGGTAGAGAGGGTTTGGAAGGAGATAGGAGACGAGGAGGAGACATTGGAC
ACGGAAGGGTTTGGGGGGTTCAAGAAGAAAGTCAAGGACATGCTACAAAG
TAGGGAGGAGGCAACCCTTCGGAAGAAGTTACGAAGCGAAGAGCACTTGG
AGACATACGGGAAGCTGAAAGAAGGGATAGGGATGAAGAGTTACTTGGAC
GGCCCCATGGACTACGCAAAAAAAATGAAGGTGCAATTTCGAGTAGGCGA
TCTGGACTTGCCAGAACGGAGGAAGAGGTACAGCAGCCGTAGGAGAGAGG
AAGAGGAGGTTAGACAGACATGTCCATGTGGCAAATCGGAGGAGAGTAGA
CCCCACATAGTTGGGGAGTGTGAGCTGTACAGGAAGGAAAGAGAGGATCT
CGAGGAGGACATGAGACAGAGAGGGTGTGACATGGACAAGTTTGGGAAGA
CATTTTTGAGCCACCTTTGGCAAAGTAGGAAGGAACGATTGGCCATCGGT
GATCGGTCCTGTGGGAACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAA
TGATCCACACTACTACAGCGACCCCGCGAGCATCCGGAGCTACCGGCTGC
GGCAGAGCCGCGCCTGGCAGTCGGGCACCTCGCTGGCTGTGGTGGCGTAC
ATCGCGGCGTGCTTCTTGGGCAAGCCGCCCTTCTCCGCGGACTGGGGCGG
GATGCCGCCCCTCTCGGCCCTGCAGGGGGAGATGGGCCAGACGTGGGGGC
TGTTCCTCGAGTGCGGCTGCGTGGTCTTCTTCGCGTTCGACATGTACTTG
CTCTACAAGTGGGTCGTCTTTTTTTGTTTTCTTTCCCTACGCGCCATCAC
TCAACACATTGTCAGGTGTGTGGGGTTCCGATCGATCGTAACCTGCTGGT
GGCAGGCAGCGTTCCTTTTGTCCCTCGTTTTCTCCGTGACAGACTTGGGG
AGTCGGTGGTACACGCATCGGCCGTGGAGCCGTGTGTTTCGCCCCGCGGT
GTTTTTCTTCGTGGGGCCCAAGGTCCGGAACAACTCCCTCTCCACCCTCC
ACGCGGTGAGCGCGCTGCTGCCCGTCCTCGTGCTGGAACTGCTGGTCACC
CTCGCCTACGCTTGTGGGTGCGTGGTTCTGTACCACGGTGTGAAGGACGC
CCCGTTTACTACCCTCGGCAGCGCGTTCATGAACCTCTTCGCGCTGTCCA
CGACGGTCAACGACCCGGACGTGTGGATGCCGCTGTACGACAGGAATCGC
GCTAACGTGTTGGTGTTTGTATCGTTCCTGGTGGTGCAGGTGTGGAACGA
GTTTGGTGAGCGCATGAAGATCTACGCCAGGCAGAAGAGGATGTGGAGGG
AGGAGAGCGTAAGAAGGGCTTTCGAGGCGTTGGACCAGGAGGGGACGGGC
CACGTCACGCGAGAAAAGATCATGAAACTGCTCAAGACGATCAGGCCGCA
CTACGGCGAGTCTAAGCGGTACATGATGTACGAGAGGATCGTGCAGAGCG
CCAACCTCCGCGGCAGGCCCGCCCAGAGGAGAGGCAGGGCTGAGAAGGAG
TATGAGGCGGCCGAAGTTACGCAGGTACCTCTACAGAAATGA
back to top