EsuBft961_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft961_3a-0001
Unique NameEsuBft961_3a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_82contigScaffold_82:226184..237064 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog3885.XP_007152179.1
ProteomeIdEsuBft961_3
Protein domainsPTHR10037
Protein domainsCYTOPLASMIC_DOMAIN
Protein domainsIPR028801
Protein domainsTMhelix
Protein domainsIPR005821
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsTRANSMEMBRANE
Ownerapollo_admin@sb-roscoff.fr
Notetwo pore calcium channel protein 1b os:nicotiana tabacum gn:tpc1b pe:2 sv:1 [Automatic annotation]
Nb exon10
Max annot lvl35493|Streptophyta
Length1743
Hectar predicted targeting categorysignal peptide
Evalue1.47e-15
EggNOG OGsKOG2301@1|root,KOG2301@2759|Eukaryota,37IZH@33090|Viridiplantae,3GG0M@35493|Streptophyta,4JGFX@91835|fabids
Date last modified2016-06-14
Date creation2016-06-14
Preferred nameTPC1
KEGG koko:K16900
KEGG TC1.A.1.11.13,1.A.1.11.26,1.A.1.11.30
GOsGO:0000325,GO:0001508,GO:0003674,GO:0005215,GO:0005216,GO:0005244,GO:0005245,GO:0005261,GO:0005262,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008324,GO:0009791,GO:0009845,GO:0009889,GO:0009987,GO:0010119,GO:0010565,GO:0010817,GO:0012505,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0019216,GO:0019217,GO:0019222,GO:0019722,GO:0019932,GO:0022803,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022843,GO:0022857,GO:0022890,GO:0023052,GO:0030001,GO:0031090,GO:0031323,GO:0031326,GO:0032350,GO:0032501,GO:0032502,GO:0034220,GO:0035556,GO:0042304,GO:0042391,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046885,GO:0046890,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0051899,GO:0055085,GO:0062012,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0080090,GO:0080140,GO:0080141,GO:0086010,GO:0090351,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098805
DescriptionTwo pore calcium channel protein
COG categoryPT
BRITEko00000,ko04040
Cross References
External references for this mRNA
DatabaseAccession
GO0031227
GO0012505
GO0051716
GO0030001
GO0098588
GO0005245
GO0005773
GO0050794
GO0055085
GO0048856
GO0007275
GO0042221
GO0016043
GO0044446
GO0065008
GO0044425
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft961_3aEsuBft961_3aEctocarpus subulatus male Bft15bgeneScaffold_82 226184..237064 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft961_3a-0001EsuBft961_3Ectocarpus subulatus male Bft15bpolypeptideScaffold_82 226184..237064 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft961_3a-0001-exonagat-exon-89182Ectocarpus subulatus male Bft15bexonScaffold_82 226184..226318 +
EsuBft961_3a-0001-exonagat-exon-89179Ectocarpus subulatus male Bft15bexonScaffold_82 228765..228856 +
EsuBft961_3a-0001-exonagat-exon-89175Ectocarpus subulatus male Bft15bexonScaffold_82 229530..229650 +
EsuBft961_3a-0001-exonagat-exon-89177Ectocarpus subulatus male Bft15bexonScaffold_82 229896..229996 +
EsuBft961_3a-0001-exonagat-exon-89176Ectocarpus subulatus male Bft15bexonScaffold_82 232274..232465 +
EsuBft961_3a-0001-exonagat-exon-89180Ectocarpus subulatus male Bft15bexonScaffold_82 233226..233724 +
EsuBft961_3a-0001-exonagat-exon-89181Ectocarpus subulatus male Bft15bexonScaffold_82 234637..234749 +
EsuBft961_3a-0001-exonagat-exon-89178Ectocarpus subulatus male Bft15bexonScaffold_82 235258..235327 +
EsuBft961_3a-0001-exonagat-exon-89183Ectocarpus subulatus male Bft15bexonScaffold_82 236042..236242 +
EsuBft961_3a-0001-exonEsuBft961_3a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_82 236846..237064 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft961_3a-0001-cdsEsuBft961_3a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_82 226184..226318 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft961_3a-0001 ID=EsuBft961_3a-0001|Name=EsuBft961_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1743bp|location=Sequence derived from alignment at Scaffold_82:226184..237064+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTTTGTGGTCATCAGCTGCGCCATGAGCCCATGGGTGTTCAACAC
GGGCATCTTCTGGCTCACCCTGCTGCCGACATCGATCCTGCTGGGAGCGT
CTGTGCTCACGGAGCTTGTCATGACGGGTATCCGGGTGTCGATTGGGCTG
CTAATGAGCGCGAGGTGCTTGGACCTGGGCACGCTGCTCAGACTGGTCCC
CGCCATCCACGACGTGGTGTCGGTAATGTACATGATCACTCCCTCGGTGT
TCGCCCAGGCCGGCGTCATCTTTACGGTTTTCCACCTGTACTGCTACCTA
GGGATGGCCTTGTACGGCGGGGTGGTCACCCCTGGTGCTGATTTCGGGGA
CACGCCGTTCGCCAACTCTCCGTACTACTACGAGAACAACTTCAACTCCT
ACCCCGAGGGACTGGTGACTCTGTTCGAGCTCTTGGTAGTCAACAACTGG
AACATGATCATCACCGGCTACGTGCACGCCTCGCCGCTCGGCTCGTGGAC
CTACCTCTACTTCCTGAGTTTCATCACCCTGGCGGTTACCCTGGCCCTCA
ACGTGCTGACGGCCATCTTCATGACCGCCTTTACGACAGCGGCAAAGGCT
AACACACCGAGCGTCCGCGGCGGGGGCGCCCTCAGCCAAAGGTCCCGGTC
GGAGAACATCGACGAGATGGACGATGACTTGGGAGCGATATTGGCTGCCT
ACGACGTAGGGGGAGGACCAGCCGCCACCGCGGGTGTGGGTAGCAGCAGC
GGCAGCGCTGCTGAGGCTGGCGGAGGCGGCGACGGCGGCAGGGACGGCAG
TTACGGCCTATTCAGCCTTAGGTTCAGGTCCGGTCTACTCGGGAGAAGCA
ACAAGGGCTCCAGCTCTAGCGCCGGAGGGGATGGGGGTAACGGAGCGTTG
TCAGCGAGCGGAGAAATGCCGCCCCCGCCCACGCGACCCCCATCCGCGCA
AGCAGCCAAGGACGCCGCCCCCGGCTCGGAAGCATCAAACACGGCCGACA
TGGCCGCCGCCACCTCGCCGGCGGTGAGGTTCCCGGACCCCTTCCAGCAA
CCGCAGCAGCAGTCGGGGAGGCTGTCGGGGTTGCCGGAGAACGAGGAAGT
GGTGCCGGAATCGCCAGGAGCGAGCTTGGAGGGAGCCAGGGACTTGGACC
TAGGGTGGGGCAAGGGCGGCGCGGAGCCCCCGGAGCCGCCGCAGGGGGTC
GCGGGTCACGGCGGGCGCACGCGATGGGGCAGCGGGCACTACTACAAGGC
AGGCCGGAGAAATAGCTATTCGGACCGGGACATGTTCGAGGGTAGAGAGG
ATGAGGAGGACGTGCCCATGAAGATCCTCGGCGCTATCTCCATCGGCCTG
GGCAACACCATGGGCATCCGGGCGTGCATGCTGAGGTACAAGGAGCTTCG
CCCTCGGGGGGGCAAGACCGCGGGGGGGATGGAGTGGCACGGCAACGAGG
GGGACTCAAGCGGCGAAGATGAGGCGAGAGTCGGTCGTCCCCACTCCCTA
AGGACACCAGAGAAGTGGTTGTCGTTGGAACACCCCGAGTCGCACCTCAT
GTTTGAGAGCAGCGGTTTTCGGAGGATGGTTGCGCCGCACCTGCCGCTAA
AGCCGGGCGCCAAGGCGCTGGGGCTTGCGAAAGACGACGAGGGCTGGGAG
GCGATGGCCATGAGGGATGAGCTGACGGACGTGATGCTCCATAGCGCCTT
CGGAGAAGTGATCGCCAAAGAGGTGCGTGGAAGAATTCAGTAG
back to top

protein sequence of EsuBft961_3a-0001

>EsuBft961_3 ID=EsuBft961_3|Name=EsuBft961_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=580bp
MAFVVISCAMSPWVFNTGIFWLTLLPTSILLGASVLTELVMTGIRVSIGL
LMSARCLDLGTLLRLVPAIHDVVSVMYMITPSVFAQAGVIFTVFHLYCYL
GMALYGGVVTPGADFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNW
NMIITGYVHASPLGSWTYLYFLSFITLAVTLALNVLTAIFMTAFTTAAKA
NTPSVRGGGALSQRSRSENIDEMDDDLGAILAAYDVGGGPAATAGVGSSS
GSAAEAGGGGDGGRDGSYGLFSLRFRSGLLGRSNKGSSSSAGGDGGNGAL
SASGEMPPPPTRPPSAQAAKDAAPGSEASNTADMAAATSPAVRFPDPFQQ
PQQQSGRLSGLPENEEVVPESPGASLEGARDLDLGWGKGGAEPPEPPQGV
AGHGGRTRWGSGHYYKAGRRNSYSDRDMFEGREDEEDVPMKILGAISIGL
GNTMGIRACMLRYKELRPRGGKTAGGMEWHGNEGDSSGEDEARVGRPHSL
RTPEKWLSLEHPESHLMFESSGFRRMVAPHLPLKPGAKALGLAKDDEGWE
AMAMRDELTDVMLHSAFGEVIAKEVRGRIQ
back to top

mRNA from alignment at Scaffold_82:226184..237064+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft961_3a-0001 ID=EsuBft961_3a-0001|Name=EsuBft961_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=10881bp|location=Sequence derived from alignment at Scaffold_82:226184..237064+ (Ectocarpus subulatus male Bft15b)
ATGGCGTTTGTGGTCATCAGCTGCGCCATGAGCCCATGGGTGTTCAACAC GGGCATCTTCTGGCTCACCCTGCTGCCGACATCGATCCTGCTGGGAGCGT CTGTGCTCACGGAGCTTGTCATGACGGGTATCCGGGTGAGGCGTTGTTTG CGTCGTTGTTGGTGTGGAAGGATCCGAGGGAATCGATTGGTCGGGTTTTC GTCCCAGTGGAAAATTCCAGCGACATAGTTGCGTTGTCGTCGTTGTTTGT TGTTGTAGGTGACGGTGGTGTGGAAGGATCCGAGGATCGTTCGGAAACTT CCCTTCCAGACACACCCAGTCGAAGGTTCCAGCGAACTAGTTCCAAGGGA AGTTTTCGCAAATTCTGACACGATGGCATGTGCTCATAGACTCACAGTCG TATTTTTCCCCCCCCCGCGTTCCACCCGCCAATCCTTCGCCCGTGTACAA ATTGACACGGTGTCGCGACACCCTTGTGAATTGCCACGTGCACAACGCTA TCCCAACACCGTGCAACCAACCAGGCGTACTTCATCCTTCCCTGGAACCG CGTGAAGACCCTGTCGCTCGCGCTCACTGCGTCGGGCCTGCTGTGGTTCG TGGTCTTCACTTCTCCCCGAGAGTGGGGGAGCGTCTTCACGGAGGGGCAG GGAAACAAGTGAGGGTTCTTGTTTTTGTGCGGGTATAGCTGTTATTAGCT CTCTGTGTTGTAACTTTCTTGGCGTTCGGGGCGTCAGGTGGGAAAACAGA CCAGTTTTTGGTGGTCGTCATGCAGGGCGGGGGATCTAGTGAGGTTTCTT GTTTTTGATGTTCGGGGAATGTATTTGGTATCGCTCTCGGGGTTGTAATT GCCTTGGCATGGGGGCGTCAGGTGAGAAAAACATACCAGGCTCGTTTTTT CCCGAATAAGAAAATAGCGCCAAGAAACACAGCTCGACCGTGGATGTTAT CCTAAACATAGCCTGTGCTCGACAGCAGTGGCGATGAAAGAAGAAACTGA ATCTGAAGCCTTCCTTCCCTCCACCTCGTCTGCGCGAAGCGTGCCTGGGC ACGGACCGTCCAACATCACCGTAGGTGGCGCAATATATCACACCCTCTGT ACTAAGTTTCAGAGCTCGACTACTCCACCACGAATTATAAGTTTTCGGAA GGTGCTCGACGAGACGGTGCCAACGCCACCGCCACCTTCAAAATTTATCT AGGGTGGGTGATATCTTGCGTCACCTACGGCGTCTATCCCCCGCGACAAG AAGCAATCAGGAATTGCAACACCATAGCCGGGAGATAAGGAACTCAGCCG TTCGCATCCGTCCCTTCTTCCCTCTTGCACACACCTAAGGGAGACGAGAC AGCAGCGGACGGCTGAGTTTCCTTTCTGACGACTGTAGTGTTTCGTCACC TGATGGCGTCTTTGTCGCGCAGGGAGTTTTTGTTATAGGCGGTCTGTGCC CTCTTCCGTGACACATCGGCGGACGGGCGAAACTGGTCCGTTTGTTGCCG CCGTTGTTGCTGTCTCCTCAGTAGAAAAATCGTCCTGTTTTCTGGGCGGT TCCTCGTCCTCCTTCGTGCCCCTTGGTTTGTCCCGTCTTCCGCGACAAAT TACCGGGTTGGCGGACTGGCGAAGCCAGTTCGTTTGTTGCCGTCGTCGTT GCTGTCGCCACCACATTCCTCATGTCATTGCCGAATTTCCAAATTTCCGG GGTGGCGAGCTTGTAGCTCGAGGGAATTTGGAAGGGACAACATGGCGTCA CCCATGAGGGAAAACGTCCCTCCCCTGATGCCGACATTTTCATGTATCAG CTACAGGTGTTCCCGGTCAAATGAGGAAACCGCCTGGTACAAGTGTCATT TGTTGTGTGAATGGTTCACTTGAACCGCCGCGTTTCTTTGAGCGGCAAAG GCGTCCCACAGAAAAAAAGGAAGCAGGGGAGGATGTCTCGGCACCAAGGG GAGAGATCGCCATTCAATCTTGTATAATGAGGGGGAGATCGCCTTGGACT TTGTCGCGTTTGGTATGAACGTTGGGTTGAAGGAGGGCGTTTGTGGATTG GCACAAGTCAGTCAAGCTTGTGCGCCTTTTGGGTTCGTGTTGCCTGCGCC ATTCCCACGCTGCTACACATGTTGGACCGCAGCACCACTTCGTTCGGGAA TATAGGGACCATTGGGGCAAATGAATTAGAACCCGAATGGTCCACGTATT TCCGGACAGAGTGGTAGGAACCTTCGAACCTCCATCGTCTGCGTCTTTCT CTCTCTCGTGTGGGGCGACTTGCCTTGGGCTTTCGGCGCACGGGAGAGAA CCTACGCTGCTGCAACACTCGCGCAAAAGCGGTGTATTTAAAAAACAACT CGATGCATTGGAGAGCTTATGCCCGCAGCACGCTTTCCAAATTGCTCGAA ACTTTCATGAAAAACAAGTGTGGTACAATTATATGTGTTTCGCCCTCCTT ATCTTCTTGTTTCCCGCTCTGGACCCCGTTGGTATCTGCCTGCGTGGCTT GTTGCCGTTACCCCCCCACGCAATCGGCTTGGCTCCCACTCAACGCTATC TAGGGCATCGCCACCGAAGTTGCACATGCAGGTGTCGATTGGGCTGCTAA TGAGCGCGAGGTGCTTGGACCTGGGCACGCTGCTCAGACTGGTCCCCGCC ATCCACGACGTGGTGTCGGTAATGTAAGTAAAGAGTTAACGAATTGATGA TCGCCCCCACCATGTTGATTGTCGCAATGCAAGCAAGGAATGATGTACGC AAGGATTGATGAAAAACGCCCCGGAATCACTGATACGAACAACGGCCATC GGTGTTAAATGGATGCAGCGTTTCAGTCTCACCCTCGCCCCGCCCTTCGT CTCATGGCGTAACCCCCCTATCCTCACTTGTACCTATTCCCTACCCCCCC CGGTGTTGCCGTACATCGACGACCCCCTCCCGGCTCCAGACGAGCGGCAC AACCTTTTTGTCATCGACCATGGATATGTGACACCCCTGCCTTCGCATCT TCTGTTGCTGTTTGTCCCGACGGAACGCGCGAATTTCGTCAGTACATGGT CAAAATCTCTGCGCTGTCATTCGCCGAGACATGTAACACCCCTACCGTCG CATCCGCTGTCGACGTTGGCCCTCATCGAACGTACCATGGTACGAATTCC GTCGGTACATGATTGCTCCCTCGGTGTTCGCCCAGGCCGGCGTTATCTTC ACGGATGTTCACCCGTACTACTTCCGCACATACGACTACCGAGCGGGACT GTTAAGCACTGATCTAACACGCCTGTGCTGCCGTCGCTTCGCTCTCTCTG TTGCTGTTTGTCCTGATGGTACATACCATGGTACGGATTTCGTCAGGTAC ATGATCACTCCCTCGGTGTTCGCCCAGGCCGGCGTCATCTTTACGGTTTT CCACCTGTACTGCTACCTAGGGATGGCCTTGTACGGCGGGGTGGTCACCC CTGGTGCTGATTTCGGGGTAAGCGTTTTTTTTTTGTTTTTTTCTTGCTTC CGTCTCTGGCACTGTTGTGTGCGATGCGAATGACGGACGAAATGTTGTCG TATGTGTTGTTTTGGTTTGGGGGAAGATATATATATATATATATATAGTG TTTGCGGCTTACGATAAAGAAACAATATGTTTTCTTTCCTGGAACAGCAC GCCTTTTCAATAACTTCCACGACCGCGCCCCTGCGTATGCTGTTGAAAAT TCCGTGCCTCAGGACACGCCGTTCGCCAACTCTCCGTACTACTACGAGAA CAACTTCAACTCCTACCCCGAGGGACTGGTGACTCTGTTCGAGCTCTTGG TAGTCAACAACTGGTGGGTGGAAGAAGAACGATTGGACAGGGAGTGTGTT TATGGGGTAGCTTGTGTGGGTATTCTGCAATGTCGCCCTCTCATTGATAT ATTTTTTTCTTTTTGGGCTCATGTTGACCCGGAAATTGGTTGCAGTTTTT CTTTTTGGGCTCGTGCTGACCCGGAAATTGGTTGCAGTTTTTCTTTTTGG GCTCATGATGACCCGGAAATTGTTTGCAGTTTTTCTTTTTGGGCTCATGT TGACCCGGAAATTGTTTGCAGTTTGTCTTTTTGGGCTCATGTTGACCCGC CGGGAGTGTATTTGCCACCATGTTGTGGTCCTGTGCGAGGTGTGTTGTCT GCGGGTGTGGTATCTTGTGTCGTACCCGGCCTTACGGCCAAGCAAGGCGT TCAGAAGGACCCTCCCCGCCCCGCCCCCCGCCCCCGCCCACTCTCACCCT ACCTCCCACCTACCCCCAATAATTCGTCGGAAGGGAACACAATAATCACC GGTGACACCCCCAGTGCCTGACCCTCCACCTCCTCGGGGCCTACGTTTAA ACTCCCACGTCCATGTGTTCCGTCGAAAAGGAACATGAGCATCACCCGTT ACACCCCTCCCAATGCCCCCCCTTTTTTTTGGCGGTAACCATACTGGTGG TCGAGTGGATCATGTTGTGCGGGGTGGAGAACCCTCACTCCGCGCAAGGG GGATGATCGCACCACGTTGTGTTAAAATGGTCAAGCACCCTCGAGGCAGT TACACAGTGCTTACAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNCCCCTCCCCCCGAATTTCCCGGCGAAAAGGAACATGATC ATCACCGGCTACGTGCACGCCTCGCCGCTCGGCTCGTGGACCTACCTCTA CTTCCTGAGTTTCATCACCCTGGCGGTTACCCTGGCCCTCAACGTGCTGA CGGCCATCTTCATGACCGCCTTTACGACAGCGGCAAAGGCTAACACACCG AGCGTCCGCGGCGGGGGCGCCCTCAGCCAAAGGTACTAACTTCTCTTGTA CTTTGGCCTGATACGTTGAGTGGCAGCTATTCGGGCCTTTTATTTTCGTC GCGACCGAGAGTATTGATTGATCGAAGTACGATCCTTTCCTTTGCCGTGA ATCGCGCAACTCCATTCCTCAATTGTTGCCACTCACACATGACGTGTATT TTTGTCTGTGCTCCGTGTCCCTTCAAAGCGTCCCCCCCGCTCTTGGTCGC TCAACCCCGAATCCGCCCCGTCAAAATTTCGTAAATCGGAAGGGAAGTAA GGGCGGCATGATGTTTTGTGTTGCAGGTATGGCAAAACGCCCGGCTGAGG GTGGTATCGGTACGTATGAGGAGCAGGCACGGGCGCCCCTTCTCAGAAGG GAGATGTCTGCGTGGTCGATGTCAACTGATTCTGTGAAGCGACAATTGAG CCCTCTACCCCCCGAACATTGCGAAACGTAGCCTGGGCCGGCGAAAGCCG GACAGATCGCTCAGTCCTGGCATTGTAGGGATGCGAGGCCCATGGCCTAA CGACTACGGCATGCGTTTACGCGAGTCCCCCCCCTACCCCCCCTACCTTC ATATTAACTCGCCTCTCCCCGGCGTGCTCCTAAAAGCATGACCTCGGACA AGGCGCGGACGGCTCTGGGAGCGGGGGCAAGCCTCGCCCTGAGGCCCACC CCCACCCCCCTAGCCGGTTCCTCCGCCAGCTCGGAGCTCGCCGCTATGAC TATGGACGGCAGCCCCGACCAGCAGCAGCAGCAGCACGGCAGGTCCCGGT CGGAGAACATCGACGAGATGGACGATGACTTGGGAGCGATATTGGCTGCC TACGACGTAGGGGGAGGACCAGCCGCCACCGCGGGTGTGGGTAGCAGCAG CGGCAGCGCTGCTGAGGCTGGCGGAGGCGGCGACGGCGGCAGGGACGGCA GTTACGGCCTATTCAGCCTTAGGTTCAGGTCCGGTCTACTCGGGAGAAGC AACAAGGGCTCCAGCTCTAGCGCCGGAGGGGATGGGGGTAACGGAGCGTT GTCAGCGAGCGGAGAAATGCCGCCCCCGCCCACGCGACCCCCATCCGCGC AAGCAGCCAAGGACGCCGCCCCCGGCTCGGAAGCATCAAACACGGCCGAC ATGGCCGCCGCCACCTCGCCGGCGGTGAGGTTCCCGGACCCCTTCCAGCA ACCGCAGCAGCAGTCGGGGAGGCTGTCGGGGTTGCCGGAGAACGAGGAAG TGGTGCCGGAATCGCCAGGAGCGAGCTTGGAGGGAGCCAGGGTAGGCGAT ACGGCCGTTCGTTGTCGGGTACTTTGTCATTGTGTGATGTCCTTAACCTT TGGTTTTTTCTTTGGTTCCGAGCTGCTTCCAACTCGTGCCTAAGTCTTAA GCGCGAGATACTTTTCCAGGGAAGGTGGTGGCTACCGTTCGTTGACGGGT AGTCTTTGGTTGTTGCTGTATCGTCGCCCTTAGCCACTGTTTTCGCTTTT TAGTTCCGAGCTGTGTTCCTATTCGTGCTTAGACTCCGAGATCGGACACC AGGGTGTATGGATCTTCATGACGTTGTCGGTTGAGTTTTTCCAAGCTGCT ACCAATTTGTGCTTCGTCCGGATTAACTTGCAGGGTGATTCGTACTTGAT ACTGCTCGCTTGTCCGATCGTTTTTTTTTGCTCTTTATTGTCATCCTGAA CCTCTGTTTTTCTTTTTTCAACTCCAATCTGCTTTCGATTCGAGCTTACT CTCCCGACATGTGTTTTTTGCTCCCTCGTTGTTCCCTCCGCACCTTTGAA ACGGCTGTTTCCTCTGCCCTGTATTTTGGTTGTGTAGACTATCATGAATG CCTGTCAACCTGAAGTCTGGAGTTCAGGATGCTTCCCACTGTGTCTTTCC TGCCCCTAATTTCCTCTCGCTGGAGCTGACGCCTCACGGCTTTGGAGGCC CCGCAAACTACCTGGGCCCCCCGGCGGCTTGCATGTTTGGTTTGCGTGGC GTTGACCTTGCGGATGAGATTTCTTTGTTTTGTTTCTTGCAAAATCACAA CGAACTCATGTCTATCTAAAGATAATGAGTACAGTCCAGGATCAAATTTG CAACTAATCGTACTCCCCAAATATGAGTTTCGGTTAGTATTCGAGTTTGG TTCCCCATGCTACCCCGAGGTGACGCGTCGTACAACTGCCCTCCCCCCCG CAGGACTTGGACCTAGGGTGGGGCAAGGGCGGCGCGGAGCCCCCGGAGCC GCCGCAGGGGGTCGCGGGTCACGGCGGGCGCACGCGATGGGGCAGCGGGC ACTACTACAAGGCAGGGTTCTCGTTTAGTACGATGCCTGGGTTGTGTTGA TTTCGTACGCGTAGCGTGGAGCATGCGGCTGTGGTTACCTTTGTTTGGGT TGGTATTGATCGCACACGGAAAAATGAGGTATCGTGTCGTCGTCGTCGTC CTTGTTGGTGTTGATGACGATGTTCTTGTTTTGTTCTTGTTCTTTCCTGT TGTCCTTGTTCTTGTTCTCTCCTCGTTCTCAGTCCCGCTGTTCCTTTCTG CAAAACAGTTTTTTTTATTATGCCGTAGTTCCATCATGCACGACGTCGAA GGGGGCGTTTTCGCCCACATTCTGTGCAAAAGATGCTGCTTCCAAGGGGC TGAGCAGAGACCGGAACGGTTTCTATTGTCAAATCCGCTTCCAACGATGA CAAATCCGCCTTGTCAGACACCCGCTCGACGTGCTGTACCGTAGCACACG ACACGCCGCGTTACGACACAAACGAAGTAAAAACGAATGCCCTATGGCAC GCCTTGATGCGGTTTCCAGGTCAGCCGGAGAAATAGCTATTCGGACCGGG ACATGTTCGAGGGTAGAGAGGATGAGGAGGACGTGCCCATGAAGGTACGC CAAGTTTTCCATCTCATGTCGGAGGTTATTCTCGTACAAGAGGGGGACGG AAACGAGTCATCCCCGGGCTGTTCGCAGAAATCGAGTCTTAATTTAACCC GTTTTCGGTGCGGTGTACAGCAGTACGATGAAAATTGTACCTACCTCGGT GGGCACGACGACGCAGCCGTTATTCTCGCGCTTCGTGTCTGTGGAAGAGC ATACCGATGCCGAACTCGGGGTGTGCAGCAGAACGGGGGTGCTAAAAGAA AGTCTCGTCCCCTAGATTTTACCAACGTACCATAGATGGGACCGCTTTTT GTGAAACGTAGCGAATTCTTGACCCGTTGTCATGGCGCTCCACCTGTTGG GCTAGAAATTGGAATTCCCCTTGCGATAGATTATTCTGATGCCCACCGCC GAGTCGGTACGACGAACAGTTCCGGGAGCTACATCGTCCTCGTTTTGCTA TACCACCAATCATGTTGATCATGGCGTATGGGCGGTTAGAGTTTGGCACC CAATTGCCCCCCACCCCACGCTACCGTTGCTGAATCGATTTTGGGAAACA AGCTCCAATGGTCTCCTAGATAATCCATTAAGATATGAAATGACGTATGA CGGGATAGAGTTGGGCACCCAATCACCCCCCCCAACCTTGATTGAATCCG CTTCGCAATGGCCCGCTCCGCTCCTGAATCGATTTCGGGAATAATATTCA CGGCGAAGATCCTCGGCGCTATCTCCATCGGCCTGGGCAACACCATGGGC ATCCGGGCGTGCATGCTGAGGTACAAGGAGCTTCGCCCTCGGGGGGGCAA GACCGCGGGGGGGATGGAGTGGCACGGCAACGAGGGGGACTCAAGCGGCG AAGATGAGGCGAGAGTCGGTCGTCCCCACTCCCTAAGGACACCAGAGAAG TGGTTGTCGGTACTGTCTTAAACCGTTCCGATCCCTCACATTTGTTACCG TTCCGACTCAGTATTGTTTTCAGAGGCATGGTGCTCCGCAGAATGTGACA GAAGTAGGGGTGTGGTACGATTAATGGGCACTTCCGCGCTACAGTAAAGG ACATTTTTTTAGGAAGAAAATCATTTGTTTCTTGAAGCGGAGTTGACTGT TTTGAGGGACATAAAATGGAGTTGTGGTTGATGTTAGTTGTAGCCGTCGT GGTTTGCTGTCATTCTCTTGCTGTAGTTGCTGCGATTTTGTGATGATGTT GCAAAGCGTGTCGCTGTCGCTGTCGAAGTTGCTACCGTTGTCTTTTGCCT AGCGCAGGATACCCTGGTGTTTTTTTCAAACGGTATTTTGAAGGTCTTGC TGGCACCATACACTCGAGAACGCATGGGCTAGATGTGTGGTATGCAAACT CGGGGGCGAGATCGATTCATCAGCTTGCTGATCTCATGCCATAGTCTTCA ATGGTCTAACAAGGCATGGAAAACATGAGCACCCCCTGCGGTGAATGGTC TAACATCTATGGCACGCAAATCATGAGTACCCGCCCCCCGCCCCCGCCCC CGTGTCTGCCAGTTGGAACACCCCGAGTCGCACCTCATGTTTGAGAGCAG CGGTTTTCGGAGGATGGTTGCGCCGCACCTGCCGCTAAAGCCGGGCGCCA AGGCGCTGGGGCTTGCGAAAGACGACGAGGGCTGGGAGGCGATGGCCATG AGGGATGAGCTGACGGACGTGATGCTCCATAGCGCCTTCGGAGAAGTGAT CGCCAAAGAGGTGCGTGGAAGAATTCAGTAG
back to top

Coding sequence (CDS) from alignment at Scaffold_82:226184..237064+

>EsuBft961_3a-0001 ID=EsuBft961_3a-0001|Name=EsuBft961_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1743bp|location=Sequence derived from alignment at Scaffold_82:226184..237064+ (Ectocarpus subulatus male Bft15b)
ATGGCGTTTGTGGTCATCAGCTGCGCCATGAGCCCATGGGTGTTCAACAC
GGGCATCTTCTGGCTCACCCTGCTGCCGACATCGATCCTGCTGGGAGCGT
CTGTGCTCACGGAGCTTGTCATGACGGGTATCCGGGTGTCGATTGGGCTG
CTAATGAGCGCGAGGTGCTTGGACCTGGGCACGCTGCTCAGACTGGTCCC
CGCCATCCACGACGTGGTGTCGGTAATGTACATGATCACTCCCTCGGTGT
TCGCCCAGGCCGGCGTCATCTTTACGGTTTTCCACCTGTACTGCTACCTA
GGGATGGCCTTGTACGGCGGGGTGGTCACCCCTGGTGCTGATTTCGGGGA
CACGCCGTTCGCCAACTCTCCGTACTACTACGAGAACAACTTCAACTCCT
ACCCCGAGGGACTGGTGACTCTGTTCGAGCTCTTGGTAGTCAACAACTGG
AACATGATCATCACCGGCTACGTGCACGCCTCGCCGCTCGGCTCGTGGAC
CTACCTCTACTTCCTGAGTTTCATCACCCTGGCGGTTACCCTGGCCCTCA
ACGTGCTGACGGCCATCTTCATGACCGCCTTTACGACAGCGGCAAAGGCT
AACACACCGAGCGTCCGCGGCGGGGGCGCCCTCAGCCAAAGGTCCCGGTC
GGAGAACATCGACGAGATGGACGATGACTTGGGAGCGATATTGGCTGCCT
ACGACGTAGGGGGAGGACCAGCCGCCACCGCGGGTGTGGGTAGCAGCAGC
GGCAGCGCTGCTGAGGCTGGCGGAGGCGGCGACGGCGGCAGGGACGGCAG
TTACGGCCTATTCAGCCTTAGGTTCAGGTCCGGTCTACTCGGGAGAAGCA
ACAAGGGCTCCAGCTCTAGCGCCGGAGGGGATGGGGGTAACGGAGCGTTG
TCAGCGAGCGGAGAAATGCCGCCCCCGCCCACGCGACCCCCATCCGCGCA
AGCAGCCAAGGACGCCGCCCCCGGCTCGGAAGCATCAAACACGGCCGACA
TGGCCGCCGCCACCTCGCCGGCGGTGAGGTTCCCGGACCCCTTCCAGCAA
CCGCAGCAGCAGTCGGGGAGGCTGTCGGGGTTGCCGGAGAACGAGGAAGT
GGTGCCGGAATCGCCAGGAGCGAGCTTGGAGGGAGCCAGGGACTTGGACC
TAGGGTGGGGCAAGGGCGGCGCGGAGCCCCCGGAGCCGCCGCAGGGGGTC
GCGGGTCACGGCGGGCGCACGCGATGGGGCAGCGGGCACTACTACAAGGC
AGGCCGGAGAAATAGCTATTCGGACCGGGACATGTTCGAGGGTAGAGAGG
ATGAGGAGGACGTGCCCATGAAGATCCTCGGCGCTATCTCCATCGGCCTG
GGCAACACCATGGGCATCCGGGCGTGCATGCTGAGGTACAAGGAGCTTCG
CCCTCGGGGGGGCAAGACCGCGGGGGGGATGGAGTGGCACGGCAACGAGG
GGGACTCAAGCGGCGAAGATGAGGCGAGAGTCGGTCGTCCCCACTCCCTA
AGGACACCAGAGAAGTGGTTGTCGTTGGAACACCCCGAGTCGCACCTCAT
GTTTGAGAGCAGCGGTTTTCGGAGGATGGTTGCGCCGCACCTGCCGCTAA
AGCCGGGCGCCAAGGCGCTGGGGCTTGCGAAAGACGACGAGGGCTGGGAG
GCGATGGCCATGAGGGATGAGCTGACGGACGTGATGCTCCATAGCGCCTT
CGGAGAAGTGATCGCCAAAGAGGTGCGTGGAAGAATTCAGTAG
back to top