|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LCS7 |
| ProteomeId | EsuBft957_7 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 2759|Eukaryota |
| Length | 97 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Evalue | 1.8e-16 |
| EggNOG OGs | COG4886@1|root,2QQYD@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG ko | ko:K04730,ko:K04733 |
| KEGG Pathway | ko04010,ko04064,ko04620,ko04621,ko04624,ko04722,ko05133,ko05140,ko05142,ko05145,ko05152,ko05162,ko05164,ko05169,map04010,map04064,map04620,map04621,map04624,map04722,map05133,map05140,map05142,map05145,map05152,map05162,map05164,map05169 |
| KEGG Module | M00686 |
| GOs | GO:0005575,GO:0005623,GO:0005886,GO:0005911,GO:0009506,GO:0016020,GO:0030054,GO:0042995,GO:0044464,GO:0055044,GO:0071944,GO:0090406,GO:0120025 |
| EC | 2.7.11.1 |
| Description | protein serine/threonine kinase activity |
| COG category | S |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01001 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft957_7a-0001 ID=EsuBft957_7a-0001|Name=EsuBft957_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=977bp|location=Sequence derived from alignment at Scaffold_68:257894..259038+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAAGGCCAACAAAGCAACCCTCACGGGCGACTGGAAGGAGGAGAGCAC
GGTGTTTGCCGACGTGGAACCCATGGAGCTACAAGGCTCATCCGTTCGGG
TGTACGACTGCGCTGGACAGGTGACAAGTGTTGCTCATGCCGAAGCGTTT
ATGATCGGTGCTTAAAGGAGGTGTTGCGTGACCGTCGCCCAGGATCGTTC
GCTGTCCGCCTTGGATGCGAGTGATGCTGTAGCGACTACGTGGAGGAAGG
ATTGCCAGAAAAAGCGAAATCCTGCACTCAATATCTCCAAACGCCTTTCA
GCTTGTCCTGCCCATTACGAGTTGTTTCACGCGACACCGAAAAAGTTCAA
GTACCTGGACCGTTTTAAACGGACCGACTTTTTTGTCAAAATTTTCGACA
TTTGTCTTTCAAAAACTTGTAACCTGTATGCAGTCATTTTAAACGTGTGA
CGTGGACTTGTGCAACTTGTGTCAAAAAAAATGACGCCGTCCGTGAGTTG
TAGCGCTCACTTCGAGACAACACACACGACACAACACAAACCGCGGAAAA
CACGACATCATGGACACCGACATGGATATCACGGACACCCAGCGTGGCCG
GCAGACCAAAACCCCGGCGAAATTCCAGCAGACGGGCTCTCTCGGTGCCG
CCGTAGGCGGTGGAGGCTTGCTCTCCAGCAAGATAGTGCTGCTGCCTGGC
ATCTCGGGGAACACTCATGTTACCACGGGAGGCGCTGCCGCCACCAACAC
TCAGAGCGAGGGTGGAGCAGGCCGCCGGCGAGGGGTGGCAACCACTGCTC
CTACCCCCCCGGGAAAAGGAAAAAACAAAGCGGCGGACGCGAAGCAACAA
CTGCAAGCCATCATGGCGGACCGCCGTTTTTCGGACGACACAGCAACAGC
AGACAGCATCGTCAACGTTGGCAACAGCGACGATAGCAATAGCGACAGCG
ACAGATGACTCACACACAACCCTAGCT back to topprotein sequence of EsuBft957_7a-0001 >EsuBft957_7 ID=EsuBft957_7|Name=EsuBft957_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=54bp
MKANKATLTGDWKEESTVFADVEPMELQGSSVRVYDCAGQVTSVAHAEAF
MIGA back to topmRNA from alignment at Scaffold_68:257894..259038+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft957_7a-0001 ID=EsuBft957_7a-0001|Name=EsuBft957_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1145bp|location=Sequence derived from alignment at Scaffold_68:257894..259038+ (Ectocarpus subulatus male Bft15b)
ATGAAGGCCAACAAAGCAACCCTCACGGGCGACTGGAAGGAGGAGAGCAC
GGTGTTTGCCGACGTGGAACCCATGGAGCTACAAGGCTCATCCGTTCGGG
TGTACGACTGCGCTGGACAGGTGACAAGTGTTGCTCATGCCGAAGCGTTT
ATGATCGGTGCTTAAAGGAGGTGTTGCGTGACCGTCGCCCAGGATCGTTC
GCTGTCCGCCTTGGATGCGAGTGATGCTGTAGCGACTACGTGGAGGAAGG
ATTGCCAGAAAAAGCGAAATCCTGCACTCAATATCTCCAAACGCCTTTCA
GCTTGTCCTGCCCATTACGAGTTGTTTCACGCGACACCGAAAAAGTTCAA
GTACCTGGTATATCATAGCATACACTACAGGGCTTGCTTCACCACAAGCC
TACGACATGCATCACCCGGGTGGAGGACAGCACGGGTGTAAACTGCTTGG
GGATCGCGTGGCTGTAATGAATTTTGAGCTCATCGAGGCACGGGCGCCGA
GTTTTGTCAAGGCGTTTGGCCTCAGGACCGTTTTAAACGGACCGACTTTT
TTGTCAAAATTTTCGACATTTGTCTTTCAAAAACTTGTAACCTGTATGCA
GTCATTTTAAACGTGTGACGTGGACTTGTGCAACTTGTGTCAAAAAAAAT
GACGCCGTCCGTGAGTTGTAGCGCTCACTTCGAGACAACACACACGACAC
AACACAAACCGCGGAAAACACGACATCATGGACACCGACATGGATATCAC
GGACACCCAGCGTGGCCGGCAGACCAAAACCCCGGCGAAATTCCAGCAGA
CGGGCTCTCTCGGTGCCGCCGTAGGCGGTGGAGGCTTGCTCTCCAGCAAG
ATAGTGCTGCTGCCTGGCATCTCGGGGAACACTCATGTTACCACGGGAGG
CGCTGCCGCCACCAACACTCAGAGCGAGGGTGGAGCAGGCCGCCGGCGAG
GGGTGGCAACCACTGCTCCTACCCCCCCGGGAAAAGGAAAAAACAAAGCG
GCGGACGCGAAGCAACAACTGCAAGCCATCATGGCGGACCGCCGTTTTTC
GGACGACACAGCAACAGCAGACAGCATCGTCAACGTTGGCAACAGCGACG
ATAGCAATAGCGACAGCGACAGATGACTCACACACAACCCTAGCT back to topCoding sequence (CDS) from alignment at Scaffold_68:257894..259038+ >EsuBft957_7a-0001 ID=EsuBft957_7a-0001|Name=EsuBft957_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=165bp|location=Sequence derived from alignment at Scaffold_68:257894..259038+ (Ectocarpus subulatus male Bft15b)
ATGAAGGCCAACAAAGCAACCCTCACGGGCGACTGGAAGGAGGAGAGCAC
GGTGTTTGCCGACGTGGAACCCATGGAGCTACAAGGCTCATCCGTTCGGG
TGTACGACTGCGCTGGACAGGTGACAAGTGTTGCTCATGCCGAAGCGTTT
ATGATCGGTGCTTAA back to top
|