Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FZA3 |
| ProteomeId | EsuBft957_14 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Max annot lvl | 2759|Eukaryota |
| Length | 164 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.73e-268 |
| EggNOG OGs | KOG4197@1|root,KOG4197@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG ko | ko:K17710 |
| Description | endonuclease activity |
| COG category | S |
| BRITE | ko00000,ko03016,ko03029 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft957_14a-0001 ID=EsuBft957_14a-0001|Name=EsuBft957_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1646bp|location=Sequence derived from alignment at Scaffold_68:313086..317438+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGTACGGCGAGGGTATTCGTCCCCACGGCGGGATGCTAGCCTCGTACCTC
TTGGCCCTCATGAGGTCCGGAGACTGGAAGACCGCTCTCGACGTTCGAGA
AAGGTATCGCGGCGACAAGGAGGAATTTCAGCTGTCTCACGCGGAGAGAC
ACGTCCACAAGCTTGACTTTGTCGCCAGAGAGGAGGCAGTGGTAGACGGT
GTTGTGGCGAACGGGCTCGTAGATAACAAACAGCCCGGCCTGGCGTTGGC
ATACGTGCTGGAAGTCCTCAAGGCTCGGGAAGAGGGTAAGGAGGGTGCTA
GCGGCAACGGCAACGATAGCGACTTGAAGCACTTCATCGACGAGGACAAT
CACACTGTACTCGCTGGAATAAGAGCTTGCAAGCAGGCCGGCTCGTGCGA
AACCGCCATAGGTTTGCTAGAGGCCTGTGAGGCGAGATGGGCGAAGGGGC
CTCTGGAGCGGGATGCGGGGAGCGGGGGCGGGAGCGAGGAGGGGCAGTGG
GCCCAGTACGAGTGGCGAGCGATGCTGGTCAGAACAAGGCTGTCCAGGAG
ACGGTTGTACGACTGCTTGATTTCTGTGCTGGATGAGAAGGATCACGACT
TTGGCGACATCCGACGGGTGCTGGAGACAGGCATGAAGAACGGCGCTGTG
TCGTTGATGAAAGACCAACAAGGTGGAACGTCGGCGGATCAGGCGGTGGA
CTTCCACGGCTGGTCCACGCGAAGCGCCCGGTGCATCGTCCGCTGCATCA
TCGAAGACCTCACCCTCGGCCAGGACTTCCTCCATCGAACGGGCCAGTAC
GACCTCGGCCGAGTGGCCCTCGCCCAGGGTCTGCGGGAGTTCGGCAACGT
CAGCGATAGGTGGCACGTTGACAGTCCCGACCCCAGGGGCAGGCGGCGGG
AGTTCGCCGACGGTGTGACTCCGGCCCGGTTCGCGGAACGAGAATACGGT
AAAGGCCGGAAACGGAATCCCGAGAAAAAGTCTCATTGGGTGAAACCCGA
GGGAGGCTGGGACGGACGTGGGTCCGACGAGAGTCAGGCTAGGTGGTGGG
AGAAGCAGAAGCGCTTGTCCTTAGTTGTGGGGAAGCCTAGACCTCCCCCG
TGTATCCGTAACGCGGTGGAGGAGTTCTGCATGCTGGGGGTGTCCCCACC
CCTGAGGGTGCAGAAGGCAGCGTCCAACCCCGGGATCTTGACCATCGAGC
CGGAGGACGTGCAGGCGTGGTTGGAGCGAAATCCGCGCGTCTTGTCGTGA
TTTTTTTTTTTTAGTTGTGTTTTTACACGTCGGCGGCGGAGTCCTTGCAA
ACTGGTGTGACGGTGTGTACGTCATGGACGCGGCAACCGAGAATGTGCGG
CCGTGATGTGGACAATCTTGCCCATCATAGAGCTGCTGCTACAAGCGTAT
TTTGAAGGGAGGGTTGGGAGAGTGAACACATCCATGTGTCTTGGGTGCTT
GGTCGAACATTTGGGCTTGGACTTGCGTGCCTGTGGGCAACGAGCATCCT
GAATTCTGGATGCTTCCGTACGAGCGCTCTGCCGACTGGAGACTGTGAAA
CGCATAGCGGGAACATCTTCTAAAAGTGCTGCTGATGGCTGATGGTCGTC
AACGTACCGGTGACATATGCCGATGGTGCTGCCTCGTGTACAGCAA back to topprotein sequence of EsuBft957_14a-0001 >EsuBft957_14 ID=EsuBft957_14|Name=EsuBft957_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=405bp
MLASYLLALMRSGDWKTALDVRERYRGDKEEFQLSHAERHVHKLDFVARE
EAVVDGVVANGLVDNKQPGLALAYVLEVLKAREEGKEGASGNGNDSDLKH
FIDEDNHTVLAGIRACKQAGSCETAIGLLEACEARWAKGPLERDAGSGGG
SEEGQWAQYEWRAMLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLETG
MKNGAVSLMKDQQGGTSADQAVDFHGWSTRSARCIVRCIIEDLTLGQDFL
HRTGQYDLGRVALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARF
AEREYGKGRKRNPEKKSHWVKPEGGWDGRGSDESQARWWEKQKRLSLVVG
KPRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLERN
PRVLS back to topmRNA from alignment at Scaffold_68:313086..317438+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft957_14a-0001 ID=EsuBft957_14a-0001|Name=EsuBft957_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4353bp|location=Sequence derived from alignment at Scaffold_68:313086..317438+ (Ectocarpus subulatus male Bft15b)
TGTACGGCGAGGGTATTCGTCCCCACGGCGGGATGCTAGCCTCGTACCTC
TTGGCCCTCATGAGGTCCGGAGACTGGAAGACCGCTCTCGACGTTCGAGA
AAGGTGTGTAGTCGCTGTGGTGCTGGTGCTGCGGGCGGTGGGCGTTATTG
TGGTCACAGAATGCTATGTAGCTCCTGTTTTATTATCGTGGCATCAAGAA
CGCGTTATTGCAGTACCTCTCGTTGCATTCTGTGGCAATATATGTATGTA
TGTATGTATTTGTTTTTCGCACCAGGTTATGAGGGCGTGAACGGACTCTT
TGCACACGACAAAGCTGGTGATAATATAGTGGGTTGTACAGGATAACTCG
CCACGTGAAAATAATTAATTTCGTGATCCTTATCCTTCCTCAGTCCGTTC
TAATATACGATTATTGTATGCGTACCGGGGGTTGTTAGGTTACTCGGGTT
ACTCTGATTTTGCGGTTCTAGATGGGAGAATTCACGTTTCAGAACACCCA
CGCTCTTGTTGTGGACCGTTGGTTATTGTCCTCCGAACGTTAACGGTCGG
GCCTGCGCTTGATTCTCTGTTGAGCTGCTTTTTGTCTGTATTCTCTGCAT
CACGCGTGTTGTGGTATGAAGGTATCGCGGCGACAAGGAGGAATTTCAGC
TGTCTCACGCGGAGAGACACGTCCACAAGCTTGACTTTGTCGCCAGAGAG
GAGGCAGTGGTAGACGGTGTTGTGGCGAACGGGCTCGTAGATAACAAACA
GCCCGGCCTGGCGTTGGCATACGTGCTGGAAGTCCTCAAGGCTCGGGAAG
AGGTGAGTTGTTCATAGCTTGCCATCACTTGCCACAGCTTGTCATGTTGT
GTTGCGAGACTGTGCGGGAAAGGAAGGCGAGTTGTTCATACTTGTCATGG
CTTGTTCTAGCTTGTCATCGCTTGCCATCATTGCCCACTTCAGTAGGTAC
TCGTGTGTAGCATGTTTGTTGCTTACATATCAGGTTCTTCTGAAGTGTAG
AGGGCGGAGTTATCGCGATATCCTTGGTACCGTCCCCTCCTCCCGGATGG
CTCCATGATGTTGGTCAATCGTACTGTGGTCGTACGCGGTGTATTTCGTT
TTTGACTTAGCACCATGCAGGGTAAGGTGAATTCGTGGGATATTGCAGTA
GGAAGCATGTTGCGCCAATCACACACACGTATCTATTTGGTCGTTGTGTC
AAGCTGTATCATTACAACTGCGGTTTTGATGTGATTTCAATGATTGTTGT
GCCATGCAGTTTGGAAGGCATGGTGGTACGTATGTGTACGCCTAGTAGCA
TGACATTGGCGCTTCGAGACATTCATGTAGGCAGTCGAGTCTCTTTGATG
CCCTTGCAAGCGTACGAAATGATACACCCACACGACAAGTTCCGTCCGCG
ACCATGTTTGGGTGTTTCGCCCATCGCATCCATCCGGTTGCGTTGTCTCC
ACAACAGGGCAGTGTTTTCCTCAACATGCTTTGCGATCGTTTCTTATGTC
CTGATGAACACGATGCCCTCTCGACAGGAGGGTGCTAGCGGCAACGGCAA
CGATAGCGACTTGAAGCACTTCATCGACGAGGACAATCACACTGTACTCG
CTGGAATAAGAGCTTGCAAGCAGGCCGGCTCGTGCGAAACCGCCATAGGT
TTGCTAGAGGCCTGTGAGGCGAGATGGGCGAAGGGGCCTCTGGAGCGGGA
TGCGGGGAGCGGGGGCGGGAGCGAGGAGGGGCAGTGGGCCCAGTACGAGT
GGCGAGCGATGCTGGTCAGAACAAGGCTGTCCAGGAGGTAAAGTATGTGA
AGAACATTAACATTAATGAAGGTCGTCGGCACGATGCTGTGTGTTCCTCT
TGACGTGGACGTTGAACAGAGAGAGAGAATGATGGACATACGATGCAGGC
CGCATACGCAACGACGCAGAGAATGTAAATGAAAAGACCTGAGAGAGGAG
GTACGATGACTGCTGTGCGGCGCTAATGAGCCGAGGTCGGCACAACTGTA
GCAGAGCGAGGTCTATCGTAGGATGAACAACATGTCTTGGTTGCTTCTTG
GGAAGACATGAGGAAGTAACCAGACCACATGTTGTGTGACCCGCGCTACG
GCTTGTTCATGCTTTGATATTGAGGGGGGGAAAAGAGATGCCGGCAGAAA
AACGATTTGGGTCCCGGGCTTTGCTGTTGAGCTTCGGATGGCATTACTTC
TCTTACTGGAGCATTCGAAGGCTTGCCGAAGCCCCTCAGGCCTGGCCTTG
CTGACACCTATCGAGGTTCATCTTCCGTCCTTACCACGACGCTCACTTTG
CACCAAAAACAGCCCGTTTTCGCGGACTATGACTGTTGAATGCGAAAGTG
ATGCGTACGCCGCTCTTCACCATCAAAAGCTGTGCTCTCTTCATACGTCT
CGATGTCTCCTCCTAGAACCTGTAGACCACGAAACAAGCCATATGCGCTG
CTTCACCGGATTGTTTTCCCTTCGGGCAGGTCTTGACAAGTGTGACGTCG
CGCCTTAGAATATCACCCCCACCTGTGTCCTCTGTGGACCCTTGTTGGCC
ATTTTGGACGCTTCTTGTGCTGGTGCTCCACGCTACATTGCCGTGTACGT
CTACCTCCTTTGATGATGTCCGGGCTACCTTACACCTCCTATTTTTTTGC
TCTTGTTGCTTAATTTTTTTGTTGTTGTTCGTTCGGTCAGACGGTTGTAC
GACTGCTTGATTTCTGTGCTGGATGAGAAGGATCACGACTTTGGCGACAT
CCGACGGGTGCTGGAGACAGGCATGAAGAACGGCGCTGTGTCGTTGATGA
AAGACGTGAGGAGGAGGAGGAGCATGAGGAGGATAGGATCAATTGATTTA
CATGTTCACAGGGATAGTAGATGGCTGTACAGCAGTGGTGTGTCTCCATG
TGGTTTTGGTGGTCGCATGGAGGAAATCTTGGGGGGTAGTCTCGGAGATG
TGCAGTAGATACCTTGGAAATGCTTGTAGACATCCGAACAGAAACTGATT
CTCGTTGGTTAACTAGTTGCAGCAGAGGAAGGACTTCGAGAGGAAAGACC
CTCATCGTACGTATAGTGGTCGGTTCTACCGTGCGGCCGATTTCGCCGCG
TCCGTACGCCCCAATTCGAATCGAATGGAATGATGGAGCACGGCTGGCGT
TATTGTTGTTTTGTGGCGGCGGCTGCCCGGTTGCCGTACATTACATTTGC
ATGTCAGCAGCTACAGAGCAGCACGTGAGCGGAGGACATTTCCGTTGGGC
ACTTGGTTAGTCGTGATGCGGCTCCTGGCGAGCAGCTACTACACTGTGGT
TTTGCTTGACCTCTTGCGTCGGAGTGACCCCCTCCCCCTTTCCCGAACTG
CGTGGCCCCTTATTACCTGCAGCAACAAGGTGGAACGTCGGCGGATCAGG
CGGTGGACTTCCACGGCTGGTCCACGCGAAGCGCCCGGTGCATCGTCCGC
TGCATCATCGAAGACCTCACCCTCGGCCAGGACTTCCTCCATCGAACGGG
CCAGTACGACCTCGGCCGAGTGGCCCTCGCCCAGGGTCTGCGGGAGTTCG
GCAACGTCAGCGATAGGTGGCACGTTGACAGTCCCGACCCCAGGGGCAGG
CGGCGGGAGTTCGCCGACGGTGTGACTCCGGCCCGGTTCGCGGAACGAGA
ATACGGTAAAGGCCGGAAACGGAATCCCGAGAAAAAGTCTCATTGGGTGA
AACCCGAGGGAGGCTGGGACGGACGTGGGTCCGACGAGAGTCAGGCTAGG
TGGTGGGAGAAGCAGAAGCGCTTGTCCTTAGTTGTGGGGAAGCCTAGACC
TCCCCCGTGTATCCGTAACGCGGTGGAGGAGTTCTGCATGCTGGGGGTGT
CCCCACCCCTGAGGGTGCAGAAGGCAGCGTCCAACCCCGGGATCTTGACC
ATCGAGCCGGAGGACGTGCAGGCGTGGTTGGAGCGAAATCCGCGCGTCTT
GTCGTGATTTTTTTTTTTTAGTTGTGTTTTTACACGTCGGCGGCGGAGTC
CTTGCAAACTGGTGTGACGGTGTGTACGTCATGGACGCGGCAACCGAGAA
TGTGCGGCCGTGATGTGGACAATCTTGCCCATCATAGAGCTGCTGCTACA
AGCGTATTTTGAAGGGAGGGTTGGGAGAGTGAACACATCCATGTGTCTTG
GGTGCTTGGTCGAACATTTGGGCTTGGACTTGCGTGCCTGTGGGCAACGA
GCATCCTGAATTCTGGATGCTTCCGTACGAGCGCTCTGCCGACTGGAGAC
TGTGAAACGCATAGCGGGAACATCTTCTAAAAGTGCTGCTGATGGCTGAT
GGTCGTCAACGTACCGGTGACATATGCCGATGGTGCTGCCTCGTGTACAG
CAA back to topCoding sequence (CDS) from alignment at Scaffold_68:313086..317438+ >EsuBft957_14a-0001 ID=EsuBft957_14a-0001|Name=EsuBft957_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1218bp|location=Sequence derived from alignment at Scaffold_68:313086..317438+ (Ectocarpus subulatus male Bft15b)
ATGCTAGCCTCGTACCTCTTGGCCCTCATGAGGTCCGGAGACTGGAAGAC
CGCTCTCGACGTTCGAGAAAGGTATCGCGGCGACAAGGAGGAATTTCAGC
TGTCTCACGCGGAGAGACACGTCCACAAGCTTGACTTTGTCGCCAGAGAG
GAGGCAGTGGTAGACGGTGTTGTGGCGAACGGGCTCGTAGATAACAAACA
GCCCGGCCTGGCGTTGGCATACGTGCTGGAAGTCCTCAAGGCTCGGGAAG
AGGGTAAGGAGGGTGCTAGCGGCAACGGCAACGATAGCGACTTGAAGCAC
TTCATCGACGAGGACAATCACACTGTACTCGCTGGAATAAGAGCTTGCAA
GCAGGCCGGCTCGTGCGAAACCGCCATAGGTTTGCTAGAGGCCTGTGAGG
CGAGATGGGCGAAGGGGCCTCTGGAGCGGGATGCGGGGAGCGGGGGCGGG
AGCGAGGAGGGGCAGTGGGCCCAGTACGAGTGGCGAGCGATGCTGGTCAG
AACAAGGCTGTCCAGGAGACGGTTGTACGACTGCTTGATTTCTGTGCTGG
ATGAGAAGGATCACGACTTTGGCGACATCCGACGGGTGCTGGAGACAGGC
ATGAAGAACGGCGCTGTGTCGTTGATGAAAGACCAACAAGGTGGAACGTC
GGCGGATCAGGCGGTGGACTTCCACGGCTGGTCCACGCGAAGCGCCCGGT
GCATCGTCCGCTGCATCATCGAAGACCTCACCCTCGGCCAGGACTTCCTC
CATCGAACGGGCCAGTACGACCTCGGCCGAGTGGCCCTCGCCCAGGGTCT
GCGGGAGTTCGGCAACGTCAGCGATAGGTGGCACGTTGACAGTCCCGACC
CCAGGGGCAGGCGGCGGGAGTTCGCCGACGGTGTGACTCCGGCCCGGTTC
GCGGAACGAGAATACGGTAAAGGCCGGAAACGGAATCCCGAGAAAAAGTC
TCATTGGGTGAAACCCGAGGGAGGCTGGGACGGACGTGGGTCCGACGAGA
GTCAGGCTAGGTGGTGGGAGAAGCAGAAGCGCTTGTCCTTAGTTGTGGGG
AAGCCTAGACCTCCCCCGTGTATCCGTAACGCGGTGGAGGAGTTCTGCAT
GCTGGGGGTGTCCCCACCCCTGAGGGTGCAGAAGGCAGCGTCCAACCCCG
GGATCTTGACCATCGAGCCGGAGGACGTGCAGGCGTGGTTGGAGCGAAAT
CCGCGCGTCTTGTCGTGA back to top
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