Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FNR4 |
| ProteomeId | EsuBft954_7 |
| Protein domains | PTHR11474 |
| Protein domains | IPR002227 |
| Protein domains | IPR008922 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 9 |
| Max annot lvl | 2759|Eukaryota |
| Length | 168 |
| Hectar predicted targeting category | other localisation |
| Evalue | 0.0 |
| EggNOG OGs | 2CZRH@1|root,2SBDH@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Common central domain of tyrosinase |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0016491 |
| GO | 0005794 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft954_7a-0001 ID=EsuBft954_7a-0001|Name=EsuBft954_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1680bp|location=Sequence derived from alignment at Scaffold_235:223657..228795- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACTCTGTGTTTTTTCGTCCGTCGTGCTTTGTACTCCAGGTGGGACGT
TGATGGACACCTCCAAGGGTACGGTCGATCGGTGGACGTGCTCTTTACAG
CGGTTGGATCATACGAGTGCTCCGTGGTCGTCTTCGACCCCACCCTGACA
GGAAAAGACCCCACCCTGAGGGGGGGCACCACGGGCAACGAGGAGTCGGC
GAGAGTGGCGGGGCCTTACAGTTTCACGGTCGAAGTGAAGTACGTGAGGA
GGGAGATACGCTCCTTGAGTGACCAGGACCGCGAGATGTTCTTCAACGCA
GTGGCGGTCATGCAGAGGGTGCCGAGCGGGGTTGGACAGATCGTGTACGG
GTCGAACTACTACAGCAAGGACTACATTACCAGGCTTCACCTCTACTATG
GCGGCACGAAAAACTGCGACCACTGGCACCAGGGAGCCGGCTTCGTGACC
TCCCACATGGCCCTTACGCTCATGTTCGAGCAGTCCTTGCAGGCGATCAA
CCCGGCCGTTACGGTGCCCTACTGGGACTTCACCCTCGAGAGCACCTTCT
TCGGGTCGTCGGATTTCCGCTCCAGCGGCGTTTTCGCGGACGACTGGTTC
GGCGCGGCGTCTCCTGATAACGGCCTCCACACCCCGACCAAGGGGCGGTT
CGCGTACGCCCCCGCCATGGCCAACGCCAAGGAGTTCTCCAGTATCTACA
ACTCGTACGGCGTCCTGCGGTCCCCGTGGAACAACGACCCCTCGCCCTTT
ATGACGAGGAGTTCGATGATCTACGGATTCTTCAACAACCTCAAGCCCTC
CGGTTGCTTCGAGTACAGCCACGCCCTCGTAAATCAGGATTGGATGAGCT
TTTCCAAGGTCCTGAACGCCGCAGCGCACGGGCACATCCACGAGACGATG
GGGGGTTCGTGGAACCACTACTTCGGCCACGAGGCATCGGAGCTCGATGA
GGAGCAAGATGACAGTGTCATGACCTTCGCTCACGAGATACAGGCAAGCG
ACAGCAGCAACAATGGAAACGCCGTGCCCGGATACGAGGCGCTCAGCAAA
GAGCTTTGGCGATCGGGCTTCTTGGACTGCCCGGACACCTGTTCCATGGA
CACCCCCTGGCAGGACTGCCAGTGCCAGTGCGACGCCGGGGCCATCGGCA
GCCGCTCGGCGGCGCAGGTGCTGAAGGAGTCCGGGGTGTTGGACTCGGTC
TCATACTACGACTCCACGGGGGAACTCATCTCGTCCTTCGAGGACGAAAA
CGGCGACGTGTTGTTCACCCTACCGGGCTACTCCGAGGAGGAGAGCACCC
AGATCTACCAGCAGCTCATGTACCTGCTGTGCTCCCCGGGACACATTGGC
ACCATGTTCCAGGCCACCAGCACGAACGACATCACGTTCTGGGTGCTGCA
CCCCAGCGTCGACAGGTGCGCGAGCGACGACGAGAGACGGAGTAGTTGTT
GTTGGTGGTGTAGTAGTAGGTAGGTGCGCGAGGGAAGGAGGAGGTAGTTG
GTAGTTTTTGGTTCCTTGACGAATGAATAGTCGAAGGAGCAGAGGAGCGA
TACCTTCAAGCGAAGCAGCCCTTGGTACAGTATCCCGTCGTGCTTTCTGC
TGCTGTAGGCCCACAATTTATTTTTTTGAGGCCGCCCTGGTAAGGGTCCC
TCTCCGGTGTTGTGCGAGGAAGAGGAGGTA back to topprotein sequence of EsuBft954_7a-0001 >EsuBft954_7 ID=EsuBft954_7|Name=EsuBft954_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=490bp
MTLCFFVRRALYSRWDVDGHLQGYGRSVDVLFTAVGSYECSVVVFDPTLT
GKDPTLRGGTTGNEESARVAGPYSFTVEVKYVRREIRSLSDQDREMFFNA
VAVMQRVPSGVGQIVYGSNYYSKDYITRLHLYYGGTKNCDHWHQGAGFVT
SHMALTLMFEQSLQAINPAVTVPYWDFTLESTFFGSSDFRSSGVFADDWF
GAASPDNGLHTPTKGRFAYAPAMANAKEFSSIYNSYGVLRSPWNNDPSPF
MTRSSMIYGFFNNLKPSGCFEYSHALVNQDWMSFSKVLNAAAHGHIHETM
GGSWNHYFGHEASELDEEQDDSVMTFAHEIQASDSSNNGNAVPGYEALSK
ELWRSGFLDCPDTCSMDTPWQDCQCQCDAGAIGSRSAAQVLKESGVLDSV
SYYDSTGELISSFEDENGDVLFTLPGYSEEESTQIYQQLMYLLCSPGHIG
TMFQATSTNDITFWVLHPSVDRCASDDERRSSCCWWCSSR back to topmRNA from alignment at Scaffold_235:223657..228795- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft954_7a-0001 ID=EsuBft954_7a-0001|Name=EsuBft954_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5139bp|location=Sequence derived from alignment at Scaffold_235:223657..228795- (Ectocarpus subulatus male Bft15b)
ATGACTCTGTGTTTTTTCGTCCGTCGTGCTTTGTACTCCAGGTGGGACGT
TGATGGACACCTCCAAGGGTACGGTCGATCGGTGGACGTGCTCTTTACAG
CGGTTGGATCATACGAGGTGAGACCCGATTCTGGAGACAGAGAAGCCGTG
TTTTCGGTTCGGAGCTCTGGATAGCGACCACGTGTGACGACTGCTTTTTT
GGTGTGGGCCGGGGCTGTTTGCTAACAGACATGCACAACACGAATTTTTG
TGTGCGTGGGAAACGAGTCATTCCCGTCTTAAACAGTCTTGTGGCAACAC
AAACGTGTGTTTGTTGTTGTGATCATAGCTCATCGGAAGAAATTTGCTGC
AGAAGCTGAGGTATTCCGTTGTTGGCCCCTTGAGGAGCTGTTAGACAAGA
GCTTGGCGTACGGCAGCAAAACAGGCAAGCGTCGTTGCGATTCCACTCTG
GTAAACAGCTACTACCCCGTGCTACTACTGCTGCATCCCTCCTTTACCAA
CTTGTGCTCACTTGCTCACCCAACACGCAGACGTCAATCCGTCGGATACA
TACTCAAGGCAGACGGGCGTAGACTCTCCCCATGTATCGAATACACACAC
CAAAACGACCGCCGTCATATGTATAGCAGCTGCTTCCCTCCGCCCACATG
ATCTCCCTCGCTGTTCTAACCCCGTACGCATCCCACGCCCTCATCTTGTG
CCTTCTCCCTCCCGCCACGTCTGCCGAATGATTGGTCAATCAAAATGACA
GTGCTCCGTGGTCGTCTTCGACCCCACCCTGACAGGAAAAGACCCCACCC
TGAGGGGGGGCACCACGGGCAACGAGGAGTCGGCGAGAGTGGCGGGGCCT
TACAGTTTCACGGTCGAAGTGAAGTACGTGAGGAGGGAGATACGCTCCTT
GAGTGACCAGGTAAAGAGCCGGCGGCCCCGCCGTGTGTGCTGCTCATCCT
TGGGCGGGTGGGGGGGTGATCGTGTACCCTGCTGTTGCACTTGCCTCTCT
GCTGCGAGTACTATTTATCGACGTGATATTTTGGTCTTTCTGCTTCTGGT
AGGGATGCCGGTGATGGAGAGTTGGGTGTTGCCTCTGTTATCTTATGGTA
AGAACGACGGTTTCCGACGACGGAACCGGAGGGAACGACGGGCGTGAAAG
ACGCAAGTCTAGTGCTGCGCTCTTCCTCCATCCGCCAAACGCGTTGCACA
AGAAACGAGTCCGACCCCTTTTCGCTTCAGCACGCTCTCGTTTCTCTGCT
GCCCGACCGACCGTTCAATCGATCGCACGAAACTGTCTTAACTGATTTAT
TTTTCACCTTTTTTCCCGGCGGGGGGGGGTTAACAGGACCGCGAGATGTT
CTTCAACGCAGTGGCGGTCATGCAGAGGGTGCCGAGCGGGGTTGGACAGA
TCGTGTACGGGTCGAACTACTACAGCAAGGACTACATTACCAGGCTTCAC
CTCTACTATGGTAAGAAAAGCTGGCGACTGCCGTGCCACATGTTGGTTCG
ATGTATTTTGTCTTGTGGAAATATACAGTGGTCTAACGACGGGTTTCCGT
TGTCCACGGCGTTAGTGCGTGCTGCACACCTCTGGTGCGGTAGGTGCGGT
GTTTTCATTGGTCCGATGGTTGTTGTGCGACATGCGATGGGCCCCTCGGG
TTTCGTGGAGTTTTCTGTTGTTTCGTGGGTCGTGGACTCTGGTAAGAACT
TCCCAGAATCTGTACTACGGTATGAAGGAATGATGCCATGCGGTGTTTTG
CGGCATAGATTTTGTGGTGATAGTTGGAAACAGCAGTGGGGTGAAAAAAG
CCCAAAAGGCGCTGCGAATTAATCCTTCGTGTGCCCCCACACACCCGTTG
GCCGCGTCCTTACGTCGAGTTGAAACGTGTCACTCTTATGTCGCCGGTGT
TGATTTGCACGTGTGTGAGCATCCTCGCGTCTGTCCTCGTCGCTACTTGT
TTGTGTTTGTCTCGGAGGTGTTTACAACCCGCCCATCTATATCCATCCCA
ACAAACGCCCGCCCGCTCTTCACCTCCGCCAAAAAACATCAGGCGGCACG
AAAAACTGCGACCACTGGCACCAGGGAGCCGGCTTCGTGACCTCCCACAT
GGCCCTTACGCTCATGTTCGAGCAGTCCTTGCAGGCGATCAACCCGGCCG
TTACGGTGCCCTACTGGGACTTCACCCTCGAGAGCACCTTCTTCGGGTCG
TCGGATTTCCGCTCCAGCGGCGTTTTCGCGGACGACTGGTTCGGCGCGGC
GTCTCCTGATAACGTGAGACAGAGACAGAGACAGAGAGAGGAGGATGGAA
AGGGAGAGACAGATAGAGATAAGGAGAGACAGAGAAAGAGATGGGTGCAG
CAAGAGGATAGAGACATTCATGCAAGGGCAGAGACGTCAGGAAAAGAAAA
ACCCGCACATGCCCCCGCAGGAAAAAAATGTCGGAGAACGAATGTTTTCG
TATGTACTTGCTTCGAACATAAGGGGGACAGGGGGCAACTTCTTGTTTGA
AAAATGCTGGTACAGCAGTATTGGTGTTCCTAGGATGTTTGGATTTTTCT
ATTGATGCGGTCATTGTGTTTTTTTTAGGTTTTTGTGAAGACGTGTTGGA
CGAGAGACCCCCGACCTAACGCATATTTTTTTCTTTTCCTCTCGATCGAA
CGACCGGCGATGATAACGACAACGACAAAACAACCAGGGCCTCCACACCC
CGACCAAGGGGCGGTTCGCGTACGCCCCCGCCATGGCCAACGCCAAGGAG
TTCTCCAGTATCTACAACTCGTACGGCGTCCTGCGGTCCCCGTGGAACAA
CGACCCCTCGCCCTTTATGACGAGGAGTTCGATGATCTACGGATTCTTCA
ACAACCTCAAGCCCTCCGGTTGCTTCGAGTACAGCCACGCCCTCGTAAAT
CAGGATTGGTGGGTTTGTTGTTCTTGTTCAGTAGCGTTAGTCTTTTTTTT
TCATTCAAATACAAGGTGGTTGCCTTGCCTTCACACCAATGCGGAGAGAT
TGTTTTCAGTTGTTTGTAATGATTGCTGTCGCATCGTGATTGGAAAACTG
CAGTTGGTTCTGTACCTCTCTTACCTCTCTGCTGTTCACGGCGACACACG
GTGACACACGTTCTGACCCTCGCCCCTCTCTCGCCATTCGTGCCTGTCAC
TGGTTTTGTGTTGATGGTATGATGAGCAGGATGAGCTTTTCCAAGGTCCT
GAACGCCGCAGCGCACGGGCACATCCACGAGACGATGGGGGGTTCGTGGA
ACCACTACTTCGGCCACGAGGCATCGGAGCTCGATGAGGAGCAAGATGAC
AGTGTCATGACCTTCGCTCACGAGATACAGGCAAGCGACAGCAGCAACAA
TGGAAACGCCGTGCCCGTCAGGGATGATGATACAAAAGAACAAAGGCGTG
AAACGGCAAGCAACAAATACCCGCACACATAGCATGTAGCCTGCGCCGGT
GACAACCCGGCGTATCGCTATCCGTTCCAGCGTGGTAGGGATACGAGGTA
TGTGGTCTACCGACCACGGCATATTGCGTTGACATGAGTGCCCCGCCCCC
ACAAATACACGCACACACACATACACACACCCTGAACCCAACCCCCTTAC
CCCCCACCCTCCTCCCCGCCGCGATCCTGATTCGTCCACCCACTCGGACA
GGCGCTCAGCAAAGAGCTTTGGCGATCGGGCTTCTTGGACTGCCCGGACA
CCTGTTCCATGGACACCCCCTGGCAGGACTGCCAGTGCCAGTGCGACGCC
GGGGCCATCGGCAGCCGCTCGGCGGCGCAGGTGCTGAAGGAGTCCGGGGT
GTTGGACTCGGTCTCATACTACGACTCCACGGGGGAACTCATCTCGTCCT
TCGAGGACGAAAACGTGAGGTTTTTTCTCTGGTGTGACGATTTTGTTATC
CTTTCGTTTTGGTTGAACAATACCCACTGCTGGTTTGCCTTGTTTTTTGG
CTGAGAGAAAGGATCGCTCCGATAGATTCTTGGCGTCCACCAACGATATT
TCCGACGTTGAATGAAGGGGTTGCCCCGGCTCGTGTTGAGGCGCGACTCG
CGTTCCCGCGCGCGTTCCCTCTCCCCGAGGTGACCGCCTTTTTCTTCACA
TCGACCAAACTTTTGCCACGGCCGCCGTCGGAAAGGGGCAACACTTTGTT
TATTTTTACTTTTTTTGTGTGATTGTAACACAACACAACAAACCATAGAT
TGTGATAATCAACGCGAAGTATCGTCGGCGCTGCCTGTATGAAGCTGTTT
GTTTTTAGCGGATATGTCGCCGCGCGGTGGATTTTACAAGGCTGGCTCGA
GTAGGGCGTGTTCACTTCATTTTAGCAGTTTAGTGTTGTCTCGGTTCCGT
GTACTCGATCAGTACGAGCACATCATCGGCCAGTGGTGCGGTTGCTGCTG
GCGGTCCCTGAGAATCTAACTTGCCCGAACTCATATCTCCGAGCGAAAGT
ATTTCTGGGAGAGGAGAGAGCAGAGAAACAGCGGGCAACCTACATTTTTT
TTTACATACATCGAAAGCTTCGATGGAGGTCGATATTGGTGAATTTCACA
CAAGCTTCACACGCTTCCATGAAAGTAGACACGCGATTCCCAGGAAGCCG
CGCAACCTCCATCGAGCCCGTATGTATGGTAGGCCGGTTACGTCAGCGCG
GTTCGATGGCAGCAACGGCGTTTATTTTTACTTTTTTGGCACGTCCGCGC
GCGCACACAGGGCGACGTGTTGTTCACCCTACCGGGCTACTCCGAGGAGG
AGAGCACCCAGATCTACCAGCAGCTCATGTACCTGCTGTGCTCCCCGGGA
CACATTGGCACCATGTTCCAGGCCACCAGCACGAACGACATCACGTTCTG
GGTGCTGCACCCCAGCGTCGACAGGTGCGCGAGCGACGACGAGAGACGGA
GTAGTTGTTGTTGGTGGTGTAGTAGTAGGTAGGTGCGCGAGGGAAGGAGG
AGGTAGTTGGTAGTTTTTGGTTCCTTGACGAATGAATAGTCGAAGGAGCA
GAGGAGCGATACCTTCAAGCGAAGCAGCCCTTGGTACAGTATCCCGTCGT
GCTTTCTGCTGCTGTAGGCCCACAATTTATTTTTTTGAGGCCGCCCTGGT
AAGGGTCCCTCTCCGGTGTTGTGCGAGGAAGAGGAGGTA back to topCoding sequence (CDS) from alignment at Scaffold_235:223657..228795- >EsuBft954_7a-0001 ID=EsuBft954_7a-0001|Name=EsuBft954_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1473bp|location=Sequence derived from alignment at Scaffold_235:223657..228795- (Ectocarpus subulatus male Bft15b)
ATGACTCTGTGTTTTTTCGTCCGTCGTGCTTTGTACTCCAGGTGGGACGT
TGATGGACACCTCCAAGGGTACGGTCGATCGGTGGACGTGCTCTTTACAG
CGGTTGGATCATACGAGTGCTCCGTGGTCGTCTTCGACCCCACCCTGACA
GGAAAAGACCCCACCCTGAGGGGGGGCACCACGGGCAACGAGGAGTCGGC
GAGAGTGGCGGGGCCTTACAGTTTCACGGTCGAAGTGAAGTACGTGAGGA
GGGAGATACGCTCCTTGAGTGACCAGGACCGCGAGATGTTCTTCAACGCA
GTGGCGGTCATGCAGAGGGTGCCGAGCGGGGTTGGACAGATCGTGTACGG
GTCGAACTACTACAGCAAGGACTACATTACCAGGCTTCACCTCTACTATG
GCGGCACGAAAAACTGCGACCACTGGCACCAGGGAGCCGGCTTCGTGACC
TCCCACATGGCCCTTACGCTCATGTTCGAGCAGTCCTTGCAGGCGATCAA
CCCGGCCGTTACGGTGCCCTACTGGGACTTCACCCTCGAGAGCACCTTCT
TCGGGTCGTCGGATTTCCGCTCCAGCGGCGTTTTCGCGGACGACTGGTTC
GGCGCGGCGTCTCCTGATAACGGCCTCCACACCCCGACCAAGGGGCGGTT
CGCGTACGCCCCCGCCATGGCCAACGCCAAGGAGTTCTCCAGTATCTACA
ACTCGTACGGCGTCCTGCGGTCCCCGTGGAACAACGACCCCTCGCCCTTT
ATGACGAGGAGTTCGATGATCTACGGATTCTTCAACAACCTCAAGCCCTC
CGGTTGCTTCGAGTACAGCCACGCCCTCGTAAATCAGGATTGGATGAGCT
TTTCCAAGGTCCTGAACGCCGCAGCGCACGGGCACATCCACGAGACGATG
GGGGGTTCGTGGAACCACTACTTCGGCCACGAGGCATCGGAGCTCGATGA
GGAGCAAGATGACAGTGTCATGACCTTCGCTCACGAGATACAGGCAAGCG
ACAGCAGCAACAATGGAAACGCCGTGCCCGGATACGAGGCGCTCAGCAAA
GAGCTTTGGCGATCGGGCTTCTTGGACTGCCCGGACACCTGTTCCATGGA
CACCCCCTGGCAGGACTGCCAGTGCCAGTGCGACGCCGGGGCCATCGGCA
GCCGCTCGGCGGCGCAGGTGCTGAAGGAGTCCGGGGTGTTGGACTCGGTC
TCATACTACGACTCCACGGGGGAACTCATCTCGTCCTTCGAGGACGAAAA
CGGCGACGTGTTGTTCACCCTACCGGGCTACTCCGAGGAGGAGAGCACCC
AGATCTACCAGCAGCTCATGTACCTGCTGTGCTCCCCGGGACACATTGGC
ACCATGTTCCAGGCCACCAGCACGAACGACATCACGTTCTGGGTGCTGCA
CCCCAGCGTCGACAGGTGCGCGAGCGACGACGAGAGACGGAGTAGTTGTT
GTTGGTGGTGTAGTAGTAGGTAG back to top
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