Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft954_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 77 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft954_6a-0001 ID=EsuBft954_6a-0001|Name=EsuBft954_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=777bp|location=Sequence derived from alignment at Scaffold_235:229800..230947+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
AAAAAAAAACACACACACACACGCGATCAAGAGAAAAACAAGACACACAC
TCACGAACAGCGGATAGACGCAACACAAACGCGGCGCGCGTGCTGCTGCA
GACCCGAAGAGCTGTACGCAGCGCAGAGGCGCACCATGCCTTGTGCGGAC
GGTGAGCTGTGCCACCAACCAGACAAGACGCCGCAAGCCCCTCATGGCCA
CGTCTGTCATGGAGGATGTGGCGGGCGGCTCCACGGCAACTGCGGCAGCA
TGGTTGGCGACATCGAAACAAGGCGAATCTGCTGCTCGTGCGTCGCAAGA
GCTGGCAAGCGCAAAGAGATACCAGCTGAGGGTGCTGAGGGTGCTGGGGC
GGGACCATCTCAACGCCCGACGAAGAAGAAACGGGGGAGCGTGAAGGCTT
CGTGTGGTGCTCGTGCGCGGGTGGACATCAATGGGAAGCTTGACATCCTC
AAGCTGATCGATGCCAAGATCTCCTACGCGCAGATCGCAGACCGCTTCAA
GTGCTCTGTGCGGTTTCTTGTGACGTTGAAGTCTGACCGGAAGAAGATCG
AGGCGGCAGCTGCTGCAGGTGCCGGCAGTCAGAAAACTGCACGCAAAGCA
GAGTTTCAAGAGATGAAACGGAAGATGGCGGTGGCGGTGAGAACACGGGG
CGCGAGCGCCGTGCTCCACCGGCTTATAGTGAGCTGTCACCTCACTTCGG
CGTCCTGGAATCGGCAGCAGATGAGAGTGGCAATGGAGACGCGGCGTTCC
ATCTGCAGAAAGCAAAAATGGCGATGA back to topprotein sequence of EsuBft954_6a-0001 >EsuBft954_6 ID=EsuBft954_6|Name=EsuBft954_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=213bp
MPCADGELCHQPDKTPQAPHGHVCHGGCGGRLHGNCGSMVGDIETRRICC
SCVARAGKRKEIPAEGAEGAGAGPSQRPTKKKRGSVKASCGARARVDING
KLDILKLIDAKISYAQIADRFKCSVRFLVTLKSDRKKIEAAAAAGAGSQK
TARKAEFQEMKRKMAVAVRTRGASAVLHRLIVSCHLTSASWNRQQMRVAM
ETRRSICRKQKWR back to topmRNA from alignment at Scaffold_235:229800..230947+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft954_6a-0001 ID=EsuBft954_6a-0001|Name=EsuBft954_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1148bp|location=Sequence derived from alignment at Scaffold_235:229800..230947+ (Ectocarpus subulatus male Bft15b)
AAAAAAAAACACACACACACACGCGATCAAGAGAAAAACAAGACACACAC
TCACGAACAGCGGATAGACGCAACACAAACGCGGCGCGCGTGCTGCTGCA
GACCCGAAGAGCTGTACGCAGCGCAGAGGCGCACCATGCCTTGTGCGGAC
GGTGAGCTGTGCCACCAACCAGACAAGACGCCGCAAGCCCCTCATGGCCA
CGTCTGTCATGGAGGATGTGGCGGGCGGCTCCACGGCAACTGCGGCAGCA
TGGTTGGCGACATCGAAACAAGGCGAATCTGCTGCTCGTGCGTCGCAAGA
GCTGGCAAGCGCAAAGAGATACCAGCTGAGGGTGCTGAGGGTGCTGGGGC
GGGACCATCTCAACGCCCGACGAAGAAGAAACGGGGGAGCGTGAAGGCTT
CGTGTGGTGCTCGTGCGCGGGTGGACATCAATGGGAAGCTTGACATCCTC
AAGCTGATCGATGCCAAGATCTCCTACGCGCAGATCGCAGACCGCTTCAA
GTGCTCTGTGCGGTTTCTTGTGACGTTGAAGTCTGACCGGAAGAAGATCG
AGGCGGCAGCTGCTGCAGGTGCCGGCAGTCAGAAAACTGCACGCAAAGCA
GAGTTTCAAGAGGTGAGCTACACCTCTTCTTGCTGCTGCTGTGAGCTCGA
TTTTTAAAAAAGCAAGCTCATGTTTTCCCCCGCCTTTTATTTCTGGTGTC
GAGGCTCTCTGTCCCACTTTGTTTTTTTTTCACTTTTTTCTTTTTGTTGT
GCTTGTTTTTTTTTTCGCTTGATTTATTTTTTTTCGCCTCGCTGTGTGCC
ATTCTTCTTTGTCTTTCTCTTTCTCTTTGTTCCTTGTGTTGGTTGCAATT
CTTTTTTCTTTTCGTCGCTCGTCTTGCCTCCCTTGTTTCCGATTTCATCG
TTTTTCTCAATGTCAATCCTACATTTATTCATCTGCAACGCTTCTTGTTT
TCTGTTGCCCACAACGTTTCCAACTGTATATAGATGAAACGGAAGATGGC
GGTGGCGGTGAGAACACGGGGCGCGAGCGCCGTGCTCCACCGGCTTATAG
TGAGCTGTCACCTCACTTCGGCGTCCTGGAATCGGCAGCAGATGAGAGTG
GCAATGGAGACGCGGCGTTCCATCTGCAGAAAGCAAAAATGGCGATGA back to topCoding sequence (CDS) from alignment at Scaffold_235:229800..230947+ >EsuBft954_6a-0001 ID=EsuBft954_6a-0001|Name=EsuBft954_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=642bp|location=Sequence derived from alignment at Scaffold_235:229800..230947+ (Ectocarpus subulatus male Bft15b)
ATGCCTTGTGCGGACGGTGAGCTGTGCCACCAACCAGACAAGACGCCGCA
AGCCCCTCATGGCCACGTCTGTCATGGAGGATGTGGCGGGCGGCTCCACG
GCAACTGCGGCAGCATGGTTGGCGACATCGAAACAAGGCGAATCTGCTGC
TCGTGCGTCGCAAGAGCTGGCAAGCGCAAAGAGATACCAGCTGAGGGTGC
TGAGGGTGCTGGGGCGGGACCATCTCAACGCCCGACGAAGAAGAAACGGG
GGAGCGTGAAGGCTTCGTGTGGTGCTCGTGCGCGGGTGGACATCAATGGG
AAGCTTGACATCCTCAAGCTGATCGATGCCAAGATCTCCTACGCGCAGAT
CGCAGACCGCTTCAAGTGCTCTGTGCGGTTTCTTGTGACGTTGAAGTCTG
ACCGGAAGAAGATCGAGGCGGCAGCTGCTGCAGGTGCCGGCAGTCAGAAA
ACTGCACGCAAAGCAGAGTTTCAAGAGATGAAACGGAAGATGGCGGTGGC
GGTGAGAACACGGGGCGCGAGCGCCGTGCTCCACCGGCTTATAGTGAGCT
GTCACCTCACTTCGGCGTCCTGGAATCGGCAGCAGATGAGAGTGGCAATG
GAGACGCGGCGTTCCATCTGCAGAAAGCAAAAATGGCGATGA back to top
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