Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft952_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Length | 192 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft952_2a-0001 ID=EsuBft952_2a-0001|Name=EsuBft952_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1920bp|location=Sequence derived from alignment at Scaffold_176:19366..22140+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CATCCTGTTTCACCGCAAACATCGCCGACGCAAGCCTTGTTCTCCACGGC
AATCGACTCCGCTTGGTCGAATTACATACAGAGGAGACCACTCTCGAGGT
CATCAGACCTAATCTCGTTCTAGGACGGCCGTCCCGACTTGGGCCTGGCC
GTGGCTCGTGGCAGCCTCATGGAGGTAGACCGCACAATCGAAATCCGAGG
GGAAGAGAGGGTAGTGAGACAGCAGCGGAAGAACCACATCCGCGGGATAC
TGCTAATCAGCCAGCTGTTGAGAAAGGGTACCACCGAGGCAGCTGGAAAA
CCTGTGCAATCTGTGGTTGCTGATGAAGTTGAGCTCCTCGAAAAGGGTAG
AGAGCACGTTGAAGGCATCCGAGAGAGAGCATCGAAACGCGGGAAACGAC
AGCCTGCTGCTGCTGCTGCTGCTTCATCTGCTGCGGCGAAGAAGGCGAAG
CGCAAGGGGGCGGACGCAGCTCTCTCCGACCCTCTAGCATTGGCTCATGA
TGGCGGGACCAGAAGCGGTGCTACCCCAGAGACTTCGAGGGAGGAAGCGG
TTGCGGAGGAGCGTCGTTCCAGCGCGATGGATTTGATGCAGAACGACCCC
GTGTTGATGGAGCGAGTACGGGCCATGCTGGATGCTGGCGCGGCAGAGCA
GGCAGCAGCTAAGGTGGCGGCGATCGACGCGGCCAACACTCGTGCACTCC
GCGCGTCGTTGCAAGCGCTGAAGCAGCACTGCAACAGCTCGATAGGGTGG
ACCACTTACCAGACAGCGCTCGCTGTAGCAGCCGGAGCGGGAGAGCACAC
GTGTACTGACACGGACGTGTGCCACCCCGGCCAGCGGTGCAAGCCCGTTG
AGTCTGGTGGAGTGAGCCTTGCCGAGCGAGCTAACAGTCTCGGCATTCGG
CACGAGACTTTCAGCGACGCACGGTGGCGGATGCACAACACGAACCACGA
CATCGCCCCCAAGATCGCTGCGAGTGAGGGATGCTACGTGTACAACGAGC
GCAAGACACGGAGTGACGTGACGAATCCCGAGGTCATGGCTCTCGCCAGG
GCTTTCTGGCACTCCGACGACGTTTCCCGTGCAACAGGGAACTCAGGCAA
GGACATGTACAAGGAGTCTAAGAAGAGAGACGCACCCTCTCACCCTCGGA
GACAGCTCATGCACAAGGGAGACAGTGTGTGGAGGATGTTCCTCGAGAGC
CGGCGGTACTTGGCGCTGAAGTCAAGGCTACTTGAGCAGGACAGCAACTT
CACCGACCCTGGCAGGACGACGTTTCTGTCAACGCGGTGCGGGTGTTTAG
TGGACCCAACGGCATCGCAGTGTGCGTGTCAGATCCACACGCAGCAGACG
TTGTATCTCGAGGCCCTTTCGTTCTTGATGGGGTCGATACACCAAGACTG
CGACTGTGAGTGTAACTGGTGTGACGATCTTGGTTGTAAGAGGTGGTCTG
TCATGTGCCAGGACCTGAGCAAGTTTTCTGACGCTCTGGCGTGCGAGAAG
GTAAACTTGCTGGAGGGGGATTCCGACGGGGGATTTGAGTTTTGGGGTCG
GAAACCGGCATGCGCTGCGATGAAGTGTTCCGAGTGCGGGTTCGGAAAGC
CTGGAGGCATCCCGACCAACTGCACCGCTATTGCGAAAAACAGAGAGCGG
GTAGTAGCATGGATTCGCTTCGAAGACCAAACCATGCCTGACGGCAAGGT
GCACAAGAAGCAGCAGCTACCCCAGACGGGGAAGCTCGAAGACCTGTGGG
ACGAGTTCATGGCACACTCCGTGAAGGCGATACATGGAGCACCATGCCTT
TAGCCAAGTGGCAGCGCCAAGCCCACAAGATGTGCATGGCTACACTTCGT
CAGGGCGAGCTGTTGATCGAGACGGACTTCATCGAGAAGTACAGGCATGA
AGCACGCGTCGTGCTGACAT back to topprotein sequence of EsuBft952_2a-0001 >EsuBft952_2 ID=EsuBft952_2|Name=EsuBft952_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=544bp
MEVDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPVQSVV
ADEVELLEKGREHVEGIRERASKRGKRQPAAAAAASSAAAKKAKRKGADA
ALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERV
RAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTA
LAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSD
ARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSD
DVSRATGNSGKDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLAL
KSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEAL
SFLMGSIHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEG
DSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIR
FEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHSVKAIHGAPCL back to topmRNA from alignment at Scaffold_176:19366..22140+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft952_2a-0001 ID=EsuBft952_2a-0001|Name=EsuBft952_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2775bp|location=Sequence derived from alignment at Scaffold_176:19366..22140+ (Ectocarpus subulatus male Bft15b)
CATCCTGTTTCACCGCAAACATCGCCGACGCAAGCCTTGTTCTCCACGGC
AATCGACTCCGCTTGGTCGAATTACATACAGAGGAGACCACTCTCGAGGT
CATCAGACCTAATCTCGTTCTAGGACGGCCGTCCCGACTTGGGCCTGGCC
GTGGCTCGTGGCAGCCTCATGGAGGTAGACCGCACAATCGAAATCCGAGG
GGAAGAGAGGGTAGTGAGACAGCAGCGGAAGAACCACATCCGCGGGATAC
TGCTAATCAGCCAGCTGTTGAGAAAGGGTACCACCGAGGCAGCTGGAAAA
CCTGTGCAATCTGTGGTTGCTGATGAAGTTGAGCTCCTCGAAAAGGGTAG
AGAGCACGTTGAAGGCATCCGAGAGAGAGCATCGAAACGCGGGAAACGAC
AGCCTGCTGCTGCTGCTGCTGCTTCATCTGCTGCGGCGAAGAAGGCGAAG
CGCAAGGGGGCGGACGCAGCTCTCTCCGACCCTCTAGCATTGGCTCATGA
TGGCGGGACCAGAAGCGGTGCTACCCCAGAGACTTCGAGGGAGGAAGCGG
TGAGTTTTGAGTCACTTCTGAGGTGCTGCTGAAAGGTGTTCCAGAGTGCT
TGATTGACTGCTTTACTTTGCGCGCCAGTTCGTGCCAGCTGCTCTGTTCT
TGAATTTGAAATTTGGTACACGCGCTGCCCGTCCTCTTTGCCCCCAAGAA
TTGAGGTCCATTCCACCACGTCGATATCTTAAGCACAGAAAGCGCATTAA
AAGTTGCACGGGTTTGGCGACTGCTGTAACTGCTGCAATGACGCTGCTAC
CGTGGTGTTTATTTGCCGCTCACTCATATGTTCCCCCGACTCCTCCAAAA
ACTACTGATACGTTGTACGCAGGTTGCGGAGGAGCGTCGTTCCAGCGCGA
TGGATTTGATGCAGAACGACCCCGTGTTGATGGAGCGAGTACGGGCCATG
CTGGATGCTGGCGCGGCAGAGCAGGCAGCAGCTAAGGTGGCGGCGATCGA
CGCGGCCAACACTCGTGCACTCCGCGCGTCGTTGCAAGCGCTGAAGCAGC
ACTGCAACAGCTCGATAGGGTGGACCACTTACCAGACAGCGCTCGCTGTA
GCAGCCGGAGCGGGAGAGCACACGTGTACTGACACGGACGTGTGCCACCC
CGGCCAGCGGTGCAAGCCCGTTGAGTCTGGTGGAGTGAGCCTTGCCGAGC
GAGCTAACAGTCTCGGCATTCGGCACGAGACTTTCAGCGACGCACGGTGG
CGGATGCACAACACGAACCACGACATCGCCCCCAAGATCGCTGCGAGTGA
GGGATGCTACGTGTACAACGAGCGCAAGACACGGAGTGACGTGACGAATC
CCGAGGTCATGGCTCTCGCCAGGGCTTTCTGGCACTCCGACGACGTTTCC
CGTGCAACAGGGAACTCAGGCAAGTTGCTGCGTTGCGTTGCTGTTACCGT
AGTCTCGGTTGTATGCGGCAGTTGTGTTTTATGTTGCGAAGGTCTACCGC
TACGTTTGTTGTACTACACGGCCACACGGTGCTGTGAACTGCAATACACC
CGTTCGTTTGTCCACATTACAGATGTGATGGAGTCTCTTAGAGAAAAAAA
CGTTTGGTTTCGCCCCCTGCAGGAGCCAGGGACATGTACAAGGAGTCTAA
GAAGAGAGACGCACCCTCTCACCCTCGGAGACAGCTCATGCACAAGGGAG
ACAGTGTGTGGAGGATGTTCCTCGAGAGCCGGCGGTACTTGGCGCTGAAG
TCAAGGCTACTTGAGCAGGACAGCAACTTCACCGACCCTGGCAGGACGAC
GTTTCTGTCAACGCGGTGCGGGTGTTTAGGTGGGTCAATCTGGTTCTACG
GTTAGAGTGCCCAAAACGTGTACCTCTGGTACCTGATAAACCCGATCAAT
GTTGCTGACGTATGGCTTTGTTGACGAGGAATAAGAGCTGACGTTTTTGT
TCTCCTCTGCTTTTGGTCTGTTGCGATGTTTCACCGCCCCTTTTCAGTGG
ACCCAACGGCATCGCAGTGTGCGTGTCAGATCCACACGCAGCAGACGTTG
TATCTCGAGGCCCTTTCGTTCTTGATGGGGTCGATACACCAAGACTGCGA
CTGTGAGTGTAACTGGTGTGACGATCTTGGTTGTAAGAGGTGGTCTGTCA
TGTGCCAGGACCTGAGCAAGTTTTCTGACGCTCTGGCGTGCGAGAAGGTA
AACTTGCTGGAGGGGGATTCCGACGGGGGATTTGAGTTTTGGGGTCGGAA
ACCGGCATGCGCTGCGATGAAGTGTTCCGAGTGCGGGTTCGGAAAGCCTG
GAGGCATCCCGACCAACTGCACCGCTATTGCGAAAAACAGAGAGCGGGTA
GTAGCATGGATTCGCTTCGAAGACCAAACCATGCCTGACGGCAAGGTGCA
CAAGAAGCAGCAGCTACCCCAGACGGGGAAGCTCGAAGACCTGTGGGACG
AGTTCATGGCACACTCCGTGAAGGCGAGTTCAACAATAGTATGCCCGGCA
GGTTTACACTGTTGACTATTCTAGTCAATAAGGAGCGCTCTTTGTAGCGA
TTCATAATAACATGTCTATTGACGACACAATATCATATCTATTGCCAACC
CATCCCCTGTTCACTTTCCCTTCCTTCCATTCCAGTACATGGAGCACCAT
GCCTTTAGCCAAGTGGCAGCGCCAAGCCCACAAGATGTGCATGGCTACAC
TTCGTCAGGGCGAGCTGTTGATCGAGACGGACTTCATCGAGAAGTACAGG
CATGAAGCACGCGTCGTGCTGACAT back to topCoding sequence (CDS) from alignment at Scaffold_176:19366..22140+ >EsuBft952_2a-0001 ID=EsuBft952_2a-0001|Name=EsuBft952_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1635bp|location=Sequence derived from alignment at Scaffold_176:19366..22140+ (Ectocarpus subulatus male Bft15b)
ATGGAGGTAGACCGCACAATCGAAATCCGAGGGGAAGAGAGGGTAGTGAG
ACAGCAGCGGAAGAACCACATCCGCGGGATACTGCTAATCAGCCAGCTGT
TGAGAAAGGGTACCACCGAGGCAGCTGGAAAACCTGTGCAATCTGTGGTT
GCTGATGAAGTTGAGCTCCTCGAAAAGGGTAGAGAGCACGTTGAAGGCAT
CCGAGAGAGAGCATCGAAACGCGGGAAACGACAGCCTGCTGCTGCTGCTG
CTGCTTCATCTGCTGCGGCGAAGAAGGCGAAGCGCAAGGGGGCGGACGCA
GCTCTCTCCGACCCTCTAGCATTGGCTCATGATGGCGGGACCAGAAGCGG
TGCTACCCCAGAGACTTCGAGGGAGGAAGCGGTTGCGGAGGAGCGTCGTT
CCAGCGCGATGGATTTGATGCAGAACGACCCCGTGTTGATGGAGCGAGTA
CGGGCCATGCTGGATGCTGGCGCGGCAGAGCAGGCAGCAGCTAAGGTGGC
GGCGATCGACGCGGCCAACACTCGTGCACTCCGCGCGTCGTTGCAAGCGC
TGAAGCAGCACTGCAACAGCTCGATAGGGTGGACCACTTACCAGACAGCG
CTCGCTGTAGCAGCCGGAGCGGGAGAGCACACGTGTACTGACACGGACGT
GTGCCACCCCGGCCAGCGGTGCAAGCCCGTTGAGTCTGGTGGAGTGAGCC
TTGCCGAGCGAGCTAACAGTCTCGGCATTCGGCACGAGACTTTCAGCGAC
GCACGGTGGCGGATGCACAACACGAACCACGACATCGCCCCCAAGATCGC
TGCGAGTGAGGGATGCTACGTGTACAACGAGCGCAAGACACGGAGTGACG
TGACGAATCCCGAGGTCATGGCTCTCGCCAGGGCTTTCTGGCACTCCGAC
GACGTTTCCCGTGCAACAGGGAACTCAGGCAAGGACATGTACAAGGAGTC
TAAGAAGAGAGACGCACCCTCTCACCCTCGGAGACAGCTCATGCACAAGG
GAGACAGTGTGTGGAGGATGTTCCTCGAGAGCCGGCGGTACTTGGCGCTG
AAGTCAAGGCTACTTGAGCAGGACAGCAACTTCACCGACCCTGGCAGGAC
GACGTTTCTGTCAACGCGGTGCGGGTGTTTAGTGGACCCAACGGCATCGC
AGTGTGCGTGTCAGATCCACACGCAGCAGACGTTGTATCTCGAGGCCCTT
TCGTTCTTGATGGGGTCGATACACCAAGACTGCGACTGTGAGTGTAACTG
GTGTGACGATCTTGGTTGTAAGAGGTGGTCTGTCATGTGCCAGGACCTGA
GCAAGTTTTCTGACGCTCTGGCGTGCGAGAAGGTAAACTTGCTGGAGGGG
GATTCCGACGGGGGATTTGAGTTTTGGGGTCGGAAACCGGCATGCGCTGC
GATGAAGTGTTCCGAGTGCGGGTTCGGAAAGCCTGGAGGCATCCCGACCA
ACTGCACCGCTATTGCGAAAAACAGAGAGCGGGTAGTAGCATGGATTCGC
TTCGAAGACCAAACCATGCCTGACGGCAAGGTGCACAAGAAGCAGCAGCT
ACCCCAGACGGGGAAGCTCGAAGACCTGTGGGACGAGTTCATGGCACACT
CCGTGAAGGCGATACATGGAGCACCATGCCTTTAG back to top
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