Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LII1 |
| ProteomeId | EsuBft943_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 2759|Eukaryota |
| Length | 132 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.9e-10 |
| EggNOG OGs | 2E18F@1|root,2S8KF@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Methyltransferase domain |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft943_8a-0001 ID=EsuBft943_8a-0001|Name=EsuBft943_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1325bp|location=Sequence derived from alignment at Scaffold_420:507454..509122+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TTGTTGAAGTGGGCGCAGAAGCAGCCCCTCGGTCAAAAAGCACAAAACCA
AGAGATCAAGCAACACCCAACTCTGGCGGCATAGAGCACCAACGTACGCC
CGACAATCCACCGTCGTGCAGCCCCAAGATCGCAACCTCCATAGTATCAT
GCCTCCCACGGTGATTGCAACGGGCGACAAGGTAGACGAGATCACCTCCG
TAGTCCAGGGCTACTACGACTGCGACAACGTCTTCAACTTCTACCGGCAG
GTGGGTACAACAATGCTACCGTTGGGCGTCGGTGGTGCGCGCTTTCCGCA
TCTTTACGGATTGATCATCGGTATTTTGCGCACCTTCAACCACAGCGGGT
AGGAGGGTCGAGGCAGGGTATTTTTTCATTGCACACGGCACATGACACTA
ATGAGGGGCTTCTCCACAAGCTCTCCCGGCAATTGTTGGCATCATTGACC
CACAGCAGAGGACCCCCGAGGACCTTTGGTTGTGAGTTTGAGAACCAACC
GACCATCCTCGTCTCCGCGATGAAGTTAAATTCGTCCATCTGCTGTCGCT
CCGCATCAAAGTAAGTGCGGACCACAACTCAGCGCCCACATACATGCGCA
CACGTCAAACGATACGTGTATTGCCTTCGGCGTCTGTGCTGTGTTTCTTT
TTTTTCATGTCTTCCCTGCCTACTCTGCTGTGATGGGTACCTTCATCTCG
CTTTTGCTGTTGCTTTTGTTTTTGTGCTACATCTGGCTGTCTGCCCATCT
GCCGCCTCTTTGTCCTGTTTGCTCCGTTACTCCCACACCCTGGTGCGTAG
TGACTGGTGCTGGTACTTTTTTTATTTTTATCCGTTGATATTTTCTTTAG
GCGGGTGTGGAAGGGAAGCGTCCTTTATATTTGTTTTGTTTTAGTCTATG
CATACTTTGATCGGTTTCCGAGGGCCTTTTCTCGAACGGTCGGTGTGGTA
CCTGTTCTTTCCTTTCCATTATTTTGTTTTCTTTCTCCGAGTGGTTTGTA
CCCTATTTTTGTTTTCTTTCCCCGCGGCGTCAATGTGCCGGGTTTGGAGA
CCACGGGCTCCCCATTATTGTGGACTAGTCTAGTCTAGACTATGGAGCTA
ATGTGAGAAACAACAACAAGAAACAGCAAAACATGGCAGCAGGCTGGCGC
CCCGGTGTAGCAAGGTCATGTAGGATCATGGGTGCTAATCAGGGCATTGC
TGTTGTTTGCATAGCGGCCAAATGGTCGGGTTGTACATTGTGGTGCCGCG
CGACCTACATTATCTCGACCTACATTACCTGTGTTCATTAATTGTGGTCT
ATATACTCTCCCTTCTTCCCCTCGC back to topprotein sequence of EsuBft943_8a-0001 >EsuBft943_8 ID=EsuBft943_8|Name=EsuBft943_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=67bp
MPPTVIATGDKVDEITSVVQGYYDCDNVFNFYRQVGTTMLPLGVGGARFP
HLYGLIIGILRTFNHSG back to topmRNA from alignment at Scaffold_420:507454..509122+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft943_8a-0001 ID=EsuBft943_8a-0001|Name=EsuBft943_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1669bp|location=Sequence derived from alignment at Scaffold_420:507454..509122+ (Ectocarpus subulatus male Bft15b)
TTGTTGAAGTGGGCGCAGAAGCAGCCCCTCGGTCAAAAAGCACAAAACCA
AGAGATCAAGCAACACCCAACTGTGAGTGACTGCCTCGCCTCAAAGAAGA
CAAGAGGAGCAGCAGAAACTGCGCCCCTCCCCTCTCGGGTACATACAAAC
GCTCTCATGAGACAAAATGTCTGTAGAATAGTATACATACATTTCTGTCC
TTGCGGTGAAAATGGAATAATCTCATGTTTTTCGTTTTTCGATCTACTTG
GAAGGAGACAAGTAGTCGGCGGTAATGGCAGGGCATGGTCAAAGTATCAA
GTATCGAGGGTGGTATCCGGCCGTGCGGCTGAGCTAAGGCCATTGCTCAA
CGTTCCGTGCTCGGTGCTGTCCGCCTGCTGCTTCCGCTCCTCGTTCTGTC
TGTCGTTGTTTGCCAGCTGGCGGCATAGAGCACCAACGTACGCCCGACAA
TCCACCGTCGTGCAGCCCCAAGATCGCAACCTCCATAGTATCATGCCTCC
CACGGTGATTGCAACGGGCGACAAGGTAGACGAGATCACCTCCGTAGTCC
AGGGCTACTACGACTGCGACAACGTCTTCAACTTCTACCGGCAGGTGGGT
ACAACAATGCTACCGTTGGGCGTCGGTGGTGCGCGCTTTCCGCATCTTTA
CGGATTGATCATCGGTATTTTGCGCACCTTCAACCACAGCGGGTAGGAGG
GTCGAGGCAGGGTATTTTTTCATTGCACACGGCACATGACACTAATGAGG
GGCTTCTCCACAAGCTCTCCCGGCAATTGTTGGCATCATTGACCCACAGC
AGAGGACCCCCGAGGACCTTTGGTTGTGAGTTTGAGAACCAACCGACCAT
CCTCGTCTCCGCGATGAAGTTAAATTCGTCCATCTGCTGTCGCTCCGCAT
CAAAGTAAGTGCGGACCACAACTCAGCGCCCACATACATGCGCACACGTC
AAACGATACGTGTATTGCCTTCGGCGTCTGTGCTGTGTTTCTTTTTTTTC
ATGTCTTCCCTGCCTACTCTGCTGTGATGGGTACCTTCATCTCGCTTTTG
CTGTTGCTTTTGTTTTTGTGCTACATCTGGCTGTCTGCCCATCTGCCGCC
TCTTTGTCCTGTTTGCTCCGTTACTCCCACACCCTGGTGCGTAGTGACTG
GTGCTGGTACTTTTTTTATTTTTATCCGTTGATATTTTCTTTAGGCGGGT
GTGGAAGGGAAGCGTCCTTTATATTTGTTTTGTTTTAGTCTATGCATACT
TTGATCGGTTTCCGAGGGCCTTTTCTCGAACGGTCGGTGTGGTACCTGTT
CTTTCCTTTCCATTATTTTGTTTTCTTTCTCCGAGTGGTTTGTACCCTAT
TTTTGTTTTCTTTCCCCGCGGCGTCAATGTGCCGGGTTTGGAGACCACGG
GCTCCCCATTATTGTGGACTAGTCTAGTCTAGACTATGGAGCTAATGTGA
GAAACAACAACAAGAAACAGCAAAACATGGCAGCAGGCTGGCGCCCCGGT
GTAGCAAGGTCATGTAGGATCATGGGTGCTAATCAGGGCATTGCTGTTGT
TTGCATAGCGGCCAAATGGTCGGGTTGTACATTGTGGTGCCGCGCGACCT
ACATTATCTCGACCTACATTACCTGTGTTCATTAATTGTGGTCTATATAC
TCTCCCTTCTTCCCCTCGC back to topCoding sequence (CDS) from alignment at Scaffold_420:507454..509122+ >EsuBft943_8a-0001 ID=EsuBft943_8a-0001|Name=EsuBft943_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=204bp|location=Sequence derived from alignment at Scaffold_420:507454..509122+ (Ectocarpus subulatus male Bft15b)
ATGCCTCCCACGGTGATTGCAACGGGCGACAAGGTAGACGAGATCACCTC
CGTAGTCCAGGGCTACTACGACTGCGACAACGTCTTCAACTTCTACCGGC
AGGTGGGTACAACAATGCTACCGTTGGGCGTCGGTGGTGCGCGCTTTCCG
CATCTTTACGGATTGATCATCGGTATTTTGCGCACCTTCAACCACAGCGG
GTAG back to top
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