Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft943_7 |
| Protein domains | IPR001878 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 303 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003676 |
| GO | 0008270 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft943_7a-0001 ID=EsuBft943_7a-0001|Name=EsuBft943_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3033bp|location=Sequence derived from alignment at Scaffold_420:522765..526252- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGGATTCTGAGGATGCTGCAGGAAAGGCAGCAGCTGCGGAGAGGGC
AGCAGCCACGGAGAAGGCGGTAGAGGAAATAAGTAAGACGCTTGCACTAA
CGATGGATAAGATAGCTGCATTAGAGAGTGCTGGGAAGGCAGCAGGTGGT
CAAGCTGGGTGGGCAGCTGGAGGAGAGAGAGAGGGGAAGAAGCCCCATGT
GTGGTACGGTGGACACCAGCAGCAGGTGACGAGAGGAGTGCAGCAGCAGA
GCAGCCGCCACAACCATGTCCTTACAAGGCACAGCCGGTACCAGCATCAG
CAGCAGCTGGTGCCCAACGAACGCCCACGCCCTCCCGCTGCTCCCCCTCC
CGAGCAGCAGCACCAATGCAGCTGCTGTGGAGAGAAAGGTCATGTACATC
AGGACTGCAAATTCAACCTCGCCCGCGGACTGTTTCAGCAGCGGAGGAAC
GGTGGCTTTGGCGGCGGGTCTGTGTTCCAGCAGCAGCAGCAGCAGCAACA
GCAGCAGAAGCCAGGCGTGGTGTATGGCAGCACTGGTGGATTTCAGCAGC
AGCCGCGGCAACAACAGCTGGCGGCTGGCTCCACCCGCGGTGTGGTTGGA
CAGGTGAGTGGTGGGGTGTTTATTGGCGAGAAGGGGGGGGGGGCTGCTGC
CGGTTCGTTTGTGGCGTCTTTGCTGGTGAAAGCCCCCGCCAACATATCTT
CTCCCAACGCAGTTAGGCACCCCGCCGCTCATTCTCCCCCGCGACCCACG
ACATCACGTGTAGCACCTGCAGTAGCGCGGAAACGCGCAGAACTGGATCT
CATGGAGGCCGGGTACAGTATAAGTGTAGCAANGGCAACAACAGCTGGCG
GCTGGCTCCACCCGCGGTGTGGTTGGACAGCAAACCATGCCGATGAGATC
CTTCCTGCTGCCCCATCTTCAACGATTGGGATTTGTGGAACGGCATCCGC
ACCGGCGGTCGCAACGGCGGCTTCGGCCAGAGCTGCGGCGGCAGGAGTAA
CGCCGCATGGAGCGACAACGGCAGTGGCTGCGACGGAAACGGCGGCGGTG
GGGACAGCAGTAGCAGCGGCGTCCCCGGTTGCCGCGTTGGCGCCGGGCAG
TCAAGATACGCGCGCCGACAGCGGCGGCCTGACCTGCAGCAGCGGTGGAG
ACAACGGCATCTACGGTTTCGAGAGGGGCGCGTCGTACCCTTTTGACCCG
GGAGGGTTATTTGCGCAGGAGGTGCGTGAGGAGGGAGATCACAACAGCGG
TGGTAAGGAGGACTGGAGCAGCGGTGGCCGCAGTAGCAGCAGCGGCGACG
GCGGAGATGGCGCGGCCTGGCATGGAGCGTCAACACATCCCTTTGACAGA
GGGAAGCGGTCCCGTGGAGGAGAGCGACCAAGGGGTCCGTGCTGGGAGTG
GACCTCCCGTTCGATCGAGGTAGAGATGCATGGGCACGTGCCGGGGGGTG
ATGCTTCGCACCAAGCGGCACCAGCGGGAGCGGCGCCAACGGCAACGGCA
GCAGTTTGAGCGGGGATGAGAGGGCGCGCGAGCGGGGGGAGAGTTTACCC
TTGTCTGTTTCCCCCCCGCCCACCCCTCCCGTGCCTCCCACAGCGCCACA
CCTGCAGCGAGCCCCGGCGACGTACGCGCAAGCTCATGCGGGGCGGGCAC
AGCGCCATTTGGGGAGCAGCCGAGAAGCGGGAGATGGATGGTCTGGTTGG
GGCGGGCACGTTCGAGCCGGCAGGAGGGCTCTAGCAACGAGGAACGAACG
TCATCTCTGCCAAATGGGTCTACACGTGGAAACCTGATGAATTCGGTGAT
GTGTTGCGTGCAAAGGCTCGGCTTGTCGCTAGGGGTTTCGGTCAGCGTGA
AGGTATTGACTATTTCGAGACTTTCCCCGTGCCCTACCCATCCGAGTATT
CGCCTCTTGTCTGCTATCGCGCGTGAAATGGGTTGGGACATGTCCCACTT
TGATGCTGATCAAGCGTTTGTGCAATCGAAGCTAAATGAGATCGTGTACG
TGCGTCTGCCGCAGGGTTGTGGGCCCCTTTCGGGTAAGATTGTGAGACTT
GCCCGTAGTCTTGAAGCAGGCGTCACGCACGTGGCGCCACCACCTTGTTC
GGGGCATGAAATCTCTTTGGGTTTGACCAATGTGCTGCTGATGCGTGTGT
TATGCGTTTGATCGAGGATGGTGTGCTTCCCATGGTAGTTGTGGTGCATG
TGGATGACATTTTTTCCATCGGGCGAAATAGTGGGTGTGACAGGTTTGGC
CGAGACTTGAACGCCTACGTTCCCATCACCAACCTCGGAGCGTTGCGCTT
GTGTGCGGGAGTTCGTTTTTCACGCGATTGGGATGCTGGTACGCTTACAT
TGTCGCAAGAAACTTTTGCTGTCAACTTGGTTGCGAAGTTTGGTGTCACG
CGCAACAAGGAGACCCCGATGCCTGTTGGAGTGAAGCTTGACGATTTTTC
TGCTGACGAACTTGATGGTCTTGAGCATTTTCGTTTTTTGGTAGGTCACC
TCACGTGGCTTGCTAACCAGACTCGGCCGGATATCCTTAATGCCGTGCGG
TCCGTTGCGAGATATTCCCATGCACCGTATATCATACACTGGCGGGCTGC
GTTGCATATTGCGATGTACGTTAAATTCACGAGTACTTTTGGTATTACAT
TTCAGCGGGGTTCACGGGAGGGTATCGATTTGCGCTTGTATGTTGACTCC
GACTATGCCAGCCGGGCCACTGACCGGCGGACGGTCTCGGGAGCAGTTGT
GATGTGCGGCGGTGCATGTGTTTCGTTTTTATGAAGGACGCAGAAAAGTG
TGACCCTGTCGTCGACGGAAGCAGAGTATGTTGCGATGGCTGACGGTGTG
AAGGAGACGATTTTCTTGTGGTATATTTGGGGTTTTATTGTTTCGGGTCG
CGATGTTGGGTGCACACTGGTGTTCGAGGATAACGAGAGCGCTCTTCACC
TTGCGGTCAACCCCGCCACCACACCGAACTCTGAGCACATCGACATTCGT
CACCACTTTCTTCGGGAGCGTGTAGCACGGGGA back to topprotein sequence of EsuBft943_7a-0001 >EsuBft943_7 ID=EsuBft943_7|Name=EsuBft943_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=502bp
MSDSEDAAGKAAAAERAAATEKAVEEISKTLALTMDKIAALESAGKAAGG
QAGWAAGGEREGKKPHVWYGGHQQQVTRGVQQQSSRHNHVLTRHSRYQHQ
QQLVPNERPRPPAAPPPEQQHQCSCCGEKGHVHQDCKFNLARGLFQQRRN
GGFGGGSVFQQQQQQQQQQKPGVVYGSTGGFQQQPRQQQLAAGSTRGVVG
QVSGGVFIGEKGGGAAAGSFVASLLVKAPANISSPNAVRHPAAHSPPRPT
TSRVAPAVARKRAELDLMEAGYSISVAXATTAGGWLHPRCGWTANHADEI
LPAAPSSTIGICGTASAPAVATAASARAAAAGVTPHGATTAVAATETAAV
GTAVAAASPVAALAPGSQDTRADSGGLTCSSGGDNGIYGFERGASYPFDP
GGLFAQEVREEGDHNSGGKEDWSSGGRSSSSGDGGDGAAWHGASTHPFDR
GKRSRGGERPRGPCWEWTSRSIEVEMHGHVPGGDASHQAAPAGAAPTATA
AV back to topmRNA from alignment at Scaffold_420:522765..526252- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft943_7a-0001 ID=EsuBft943_7a-0001|Name=EsuBft943_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3488bp|location=Sequence derived from alignment at Scaffold_420:522765..526252- (Ectocarpus subulatus male Bft15b)
ATGTCGGATTCTGAGGATGCTGCAGGAAAGGCAGCAGCTGCGGAGAGGGC
AGCAGCCACGGAGAAGGCGGTAGAGGAAATAAGTAAGACGCTTGCACTAA
CGATGGATAAGATAGCTGCATTAGAGAGTGCTGGGAAGGCAGCAGGTGGT
CAAGCTGGGTGGGCAGCTGGAGGAGGTGTACATGCCGGGGGTGGGGCCGG
TGGATCAGGGAGATTATTTTTGACACGGACGGAAGGGTCGCGATCCAAAT
CATTTTTTTTCAGAGAGAGAGGGGAAGAAGCCCCATGTGTGGTACGGTGG
ACACCAGCAGCAGGTGACGAGAGGAGTGCAGCAGCAGAGCAGCCGCCACA
ACCATGTCCTTACAAGGCACAGCCGGTACCAGCATCAGCAGCAGCTGGTG
CCCAACGAACGCCCACGCCCTCCCGCTGCTCCCCCTCCCGAGCAGCAGCA
CCAATGCAGCTGCTGTGGAGAGAAAGGTCATGTACATCAGGACTGCAAAT
TCAACCTCGCCCGCGGACTGTTTCAGCAGCGGAGGAACGGTGGCTTTGGC
GGCGGGTCTGTGTTCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGAAGCC
AGGCGTGGTGTATGGCAGCACTGGTGGATTTCAGCAGCAGCCGCGGCAAC
AACAGCTGGCGGCTGGCTCCACCCGCGGTGTGGTTGGACAGGTGAGTGGT
GGGGTGTTTATTGGCGAGAAGGGGGGGGGGGCTGCTGCCGGTTCGTTTGT
GGCGTCTTTGCTGGTGAAAGCCCCCGCCAACATATCTTCTCCCAACGCAG
TTAGGCACCCCGCCGCTCATTCTCCCCCGCGACCCACGACATCACGTGTA
GCACCTGCAGTAGCGCGGAAACGCGCAGAACTGGATCTCATGGAGGCCGG
GTACAGTATAAGTGTAGCAANGGCAACAACAGCTGGCGGCTGGCTCCACC
CGCGGTGTGGTTGGACAGGTGAGTGGTGGGGTGTTTATTGGCGAGAAGGG
GGGGGGGGCTGCTGCCGGTTCGTTTGTGGCGTCTTTGCTGGTGAAAGCCC
CCGCCAACATATCTTCTCCCAACGCAGTTAGGCACCCCGCCGCTCATTCT
CCCCCGCGACCCACGACATCACGTGTAGCACCTGCAGTAGCGCGGAAACG
CGCAGAACTGGATCTCATGGAGGCCGGGTACAGTATAAGTGTAGCAATGC
GGCAGATTCCCGGACCATACCGCGTTCTTGTAATTTCGCCATCCGCGGCA
TCGCAACAACCCAAGCAGTCACCGTCTCAGCAGCAGCAGCAGCAGCAGCA
GCAGCCAGCAGCCTCACTTGTGCTATCACCCACAGCAAACCATGCCGATG
AGATCCTTCCTGCTGCCCCATCTTCAACGATTGGGATTTGTGGAACGGCA
TCCGCACCGGCGGTCGCAACGGCGGCTTCGGCCAGAGCTGCGGCGGCAGG
AGTAACGCCGCATGGAGCGACAACGGCAGTGGCTGCGACGGAAACGGCGG
CGGTGGGGACAGCAGTAGCAGCGGCGTCCCCGGTTGCCGCGTTGGCGCCG
GGCAGTCAAGATACGCGCGCCGACAGCGGCGGCCTGACCTGCAGCAGCGG
TGGAGACAACGGCATCTACGGTTTCGAGAGGGGCGCGTCGTACCCTTTTG
ACCCGGGAGGGTTATTTGCGCAGGAGGTGCGTGAGGAGGGAGATCACAAC
AGCGGTGGTAAGGAGGACTGGAGCAGCGGTGGCCGCAGTAGCAGCAGCGG
CGACGGCGGAGATGGCGCGGCCTGGCATGGAGCGTCAACACATCCCTTTG
ACAGAGGGAAGCGGTCCCGTGGAGGAGAGCGACCAAGGGGTCCGTGCTGG
GAGTGGACCTCCCGTTCGATCGAGGTAGAGATGCATGGGCACGTGCCGGG
GGGTGATGCTTCGCACCAAGCGGCACCAGCGGGAGCGGCGCCAACGGCAA
CGGCAGCAGTTTGAGCGGGGATGAGAGGGCGCGCGAGCGGGGGGAGAGTT
TACCCTTGTCTGTTTCCCCCCCGCCCACCCCTCCCGTGCCTCCCACAGCG
CCACACCTGCAGCGAGCCCCGGCGACGTACGCGCAAGCTCATGCGGGGCG
GGCACAGCGCCATTTGGGGAGCAGCCGAGAAGCGGGAGATGGATGGTCTG
GTTGGGGCGGGCACGTTCGAGCCGGCAGGAGGGCTCTAGCAACGAGGAAC
GAACGTCATCTCTGCCAAATGGGTCTACACGTGGAAACCTGATGAATTCG
GTGATGTGTTGCGTGCAAAGGCTCGGCTTGTCGCTAGGGGTTTCGGTCAG
CGTGAAGGTATTGACTATTTCGAGACTTTCCCCGTGCCCTACCCATCCGA
GTATTCGCCTCTTGTCTGCTATCGCGCGTGAAATGGGTTGGGACATGTCC
CACTTTGATGCTGATCAAGCGTTTGTGCAATCGAAGCTAAATGAGATCGT
GTACGTGCGTCTGCCGCAGGGTTGTGGGCCCCTTTCGGGTAAGATTGTGA
GACTTGCCCGTAGTCTTGAAGCAGGCGTCACGCACGTGGCGCCACCACCT
TGTTCGGGGCATGAAATCTCTTTGGGTTTGACCAATGTGCTGCTGATGCG
TGTGTTATGCGTTTGATCGAGGATGGTGTGCTTCCCATGGTAGTTGTGGT
GCATGTGGATGACATTTTTTCCATCGGGCGAAATAGTGGGTGTGACAGGT
TTGGCCGAGACTTGAACGCCTACGTTCCCATCACCAACCTCGGAGCGTTG
CGCTTGTGTGCGGGAGTTCGTTTTTCACGCGATTGGGATGCTGGTACGCT
TACATTGTCGCAAGAAACTTTTGCTGTCAACTTGGTTGCGAAGTTTGGTG
TCACGCGCAACAAGGAGACCCCGATGCCTGTTGGAGTGAAGCTTGACGAT
TTTTCTGCTGACGAACTTGATGGTCTTGAGCATTTTCGTTTTTTGGTAGG
TCACCTCACGTGGCTTGCTAACCAGACTCGGCCGGATATCCTTAATGCCG
TGCGGTCCGTTGCGAGATATTCCCATGCACCGTATATCATACACTGGCGG
GCTGCGTTGCATATTGCGATGTACGTTAAATTCACGAGTACTTTTGGTAT
TACATTTCAGCGGGGTTCACGGGAGGGTATCGATTTGCGCTTGTATGTTG
ACTCCGACTATGCCAGCCGGGCCACTGACCGGCGGACGGTCTCGGGAGCA
GTTGTGATGTGCGGCGGTGCATGTGTTTCGTTTTTATGAAGGACGCAGAA
AAGTGTGACCCTGTCGTCGACGGAAGCAGAGTATGTTGCGATGGCTGACG
GTGTGAAGGAGACGATTTTCTTGTGGTATATTTGGGGTTTTATTGTTTCG
GGTCGCGATGTTGGGTGCACACTGGTGTTCGAGGATAACGAGAGCGCTCT
TCACCTTGCGGTCAACCCCGCCACCACACCGAACTCTGAGCACATCGACA
TTCGTCACCACTTTCTTCGGGAGCGTGTAGCACGGGGA back to topCoding sequence (CDS) from alignment at Scaffold_420:522765..526252- >EsuBft943_7a-0001 ID=EsuBft943_7a-0001|Name=EsuBft943_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1509bp|location=Sequence derived from alignment at Scaffold_420:522765..526252- (Ectocarpus subulatus male Bft15b)
ATGTCGGATTCTGAGGATGCTGCAGGAAAGGCAGCAGCTGCGGAGAGGGC
AGCAGCCACGGAGAAGGCGGTAGAGGAAATAAGTAAGACGCTTGCACTAA
CGATGGATAAGATAGCTGCATTAGAGAGTGCTGGGAAGGCAGCAGGTGGT
CAAGCTGGGTGGGCAGCTGGAGGAGAGAGAGAGGGGAAGAAGCCCCATGT
GTGGTACGGTGGACACCAGCAGCAGGTGACGAGAGGAGTGCAGCAGCAGA
GCAGCCGCCACAACCATGTCCTTACAAGGCACAGCCGGTACCAGCATCAG
CAGCAGCTGGTGCCCAACGAACGCCCACGCCCTCCCGCTGCTCCCCCTCC
CGAGCAGCAGCACCAATGCAGCTGCTGTGGAGAGAAAGGTCATGTACATC
AGGACTGCAAATTCAACCTCGCCCGCGGACTGTTTCAGCAGCGGAGGAAC
GGTGGCTTTGGCGGCGGGTCTGTGTTCCAGCAGCAGCAGCAGCAGCAACA
GCAGCAGAAGCCAGGCGTGGTGTATGGCAGCACTGGTGGATTTCAGCAGC
AGCCGCGGCAACAACAGCTGGCGGCTGGCTCCACCCGCGGTGTGGTTGGA
CAGGTGAGTGGTGGGGTGTTTATTGGCGAGAAGGGGGGGGGGGCTGCTGC
CGGTTCGTTTGTGGCGTCTTTGCTGGTGAAAGCCCCCGCCAACATATCTT
CTCCCAACGCAGTTAGGCACCCCGCCGCTCATTCTCCCCCGCGACCCACG
ACATCACGTGTAGCACCTGCAGTAGCGCGGAAACGCGCAGAACTGGATCT
CATGGAGGCCGGGTACAGTATAAGTGTAGCAANGGCAACAACAGCTGGCG
GCTGGCTCCACCCGCGGTGTGGTTGGACAGCAAACCATGCCGATGAGATC
CTTCCTGCTGCCCCATCTTCAACGATTGGGATTTGTGGAACGGCATCCGC
ACCGGCGGTCGCAACGGCGGCTTCGGCCAGAGCTGCGGCGGCAGGAGTAA
CGCCGCATGGAGCGACAACGGCAGTGGCTGCGACGGAAACGGCGGCGGTG
GGGACAGCAGTAGCAGCGGCGTCCCCGGTTGCCGCGTTGGCGCCGGGCAG
TCAAGATACGCGCGCCGACAGCGGCGGCCTGACCTGCAGCAGCGGTGGAG
ACAACGGCATCTACGGTTTCGAGAGGGGCGCGTCGTACCCTTTTGACCCG
GGAGGGTTATTTGCGCAGGAGGTGCGTGAGGAGGGAGATCACAACAGCGG
TGGTAAGGAGGACTGGAGCAGCGGTGGCCGCAGTAGCAGCAGCGGCGACG
GCGGAGATGGCGCGGCCTGGCATGGAGCGTCAACACATCCCTTTGACAGA
GGGAAGCGGTCCCGTGGAGGAGAGCGACCAAGGGGTCCGTGCTGGGAGTG
GACCTCCCGTTCGATCGAGGTAGAGATGCATGGGCACGTGCCGGGGGGTG
ATGCTTCGCACCAAGCGGCACCAGCGGGAGCGGCGCCAACGGCAACGGCA
GCAGTTTGA back to top
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